Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 5.3e-229 797.3 409 100.0
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 2.8e-169 599.0 417 75.3
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 1.9e-162 576.2 418 74.2
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 4.2e-141 505.4 421 64.8
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 2.7e-132 476.1 421 61.8
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 3.0e-131 472.6 416 61.5
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 1.5e-130 470.3 410 62.4
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 3.7e-129 465.7 415 62.7
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.6e-124 450.3 416 59.9
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 7.9e-124 448.0 416 60.3
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 3.0e-123 446.0 412 59.2
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.0e-123 446.0 416 60.1
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 3.9e-123 445.7 416 60.6
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 2.0e-122 443.4 416 59.1
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.1e-120 437.6 416 60.1
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 1.4e-120 437.2 421 58.9
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 1.8e-120 436.8 411 59.4
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 1.7e-118 430.3 418 56.5
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 3.8e-118 429.1 411 57.7
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 4.2e-117 425.6 402 57.5
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 4.7e-116 422.2 425 56.5
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 1.0e-115 421.0 389 57.6
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 7.4e-114 414.8 417 54.2
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 1.1e-112 411.0 418 55.3
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 2.4e-112 409.8 391 57.0
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 7.0e-112 408.3 413 55.7
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 1.2e-111 407.5 392 57.7
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 2.6e-111 406.4 422 53.8
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 4.5e-111 405.6 424 52.6
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 1.7e-110 403.7 424 54.5
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 1.7e-110 403.7 417 54.0
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 6.5e-110 401.7 367 58.0
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.5e-110 401.4 426 54.0
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.5e-110 401.4 426 54.0
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.5e-109 399.8 368 59.8
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 3.2e-109 399.4 391 55.5
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 4.2e-109 399.1 370 55.9
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 9.4e-109 397.9 419 55.1
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 8.0e-108 394.8 419 55.1
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.4e-107 394.0 363 60.3
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.4e-107 394.0 419 55.4
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 6.8e-107 391.7 417 53.7
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 8.8e-107 391.3 419 53.5
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 4.4e-106 389.0 360 56.7
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 1.4e-104 384.0 372 55.6
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 9.1e-104 381.3 374 57.0
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 2.0e-103 380.2 335 60.3
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 4.5e-103 379.0 414 51.9
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 5.9e-103 378.6 421 51.1
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 3.8e-102 375.9 400 51.8
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 6.3e-97 358.6 419 48.9
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 1.1e-96 357.8 422 49.5
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 9.1e-96 354.8 401 47.6
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.6e-95 354.0 418 48.8
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 4.5e-95 352.4 417 51.1
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 2.3e-94 350.1 411 51.1
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 2.9e-94 349.7 412 51.0
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 5.0e-94 349.0 371 52.8
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 5.0e-94 349.0 419 48.2
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.5e-93 347.4 322 58.1
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 5.2e-91 339.0 421 48.9
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 8.9e-91 338.2 371 50.9
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 1.5e-90 337.4 343 55.4
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 5.7e-90 335.5 367 48.5
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 2.4e-88 330.1 328 54.0
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 4.5e-87 325.9 412 45.9
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 6.6e-86 322.0 406 47.3
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 1.5e-85 320.9 412 46.4
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 5.6e-85 318.9 412 46.8
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 2.1e-84 317.0 395 49.4
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 2.1e-84 317.0 372 47.8
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 4.7e-84 315.8 392 50.0
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 1.8e-83 313.9 408 48.5
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 8.9e-83 311.6 388 48.5
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.0e-82 310.5 393 46.6
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 2.6e-82 310.1 412 45.1
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 3.4e-82 309.7 348 51.7
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 5.8e-82 308.9 405 47.9
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 5.8e-82 308.9 405 47.9
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 1.7e-81 307.4 407 46.7
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 3.7e-81 306.2 405 47.4
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 4.9e-81 305.8 401 46.9
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 8.3e-81 305.1 407 46.7
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 2.4e-80 303.5 374 48.4
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 2.4e-80 303.5 412 47.1
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 6.6e-78 295.4 365 46.0
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 6.6e-78 295.4 372 48.7
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 3.3e-77 293.1 408 44.1
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.1e-75 288.1 314 53.5
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 2.7e-71 273.5 285 49.8
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.3e-67 260.4 431 42.5
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 1.1e-64 251.5 306 49.7
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 1.0e-62 245.0 386 40.7
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 1.7e-62 244.2 308 47.7
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 1.7e-62 244.2 368 42.4
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 2.1e-60 237.3 377 41.9
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.2e-60 235.7 239 57.7
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.2e-60 235.7 239 57.7
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 2.2e-57 227.3 246 51.6
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 5.3e-51 206.1 370 38.9
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 8.1e-44 182.2 269 41.6
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 6.9e-43 179.1 328 37.8
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.6e-39 167.9 126 65.9
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.6e-39 167.9 126 65.9
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.6e-39 166.4 238 47.1
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 3.3e-37 160.2 240 43.3
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 1.4e-35 154.8 185 48.6
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 7.6e-34 149.1 391 30.7
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.4e-32 144.8 115 62.6
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 3.1e-27 127.1 151 50.3
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 1.0e-25 122.1 205 42.4
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 2.2e-25 120.9 124 49.2
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 2.1e-23 114.4 356 29.8
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 2.7e-23 114.0 184 40.8
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.5e-21 108.2 133 49.6
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.8e-19 101.3 358 27.9
MCO10G213 Micromonas commoda HOM05D006726 ORTHO05D008328 1.7e-09 68.2 267 25.5
Cre09.g400997 Chlamydomonas reinhardtii HOM05D006726 ORTHO05D008328 7.2e-08 62.8 331 23.0
Lalb_Chr13g0294981 Lupinus albus HOM05D006726 ORTHO05D008328 4.7e-07 60.1 65 52.3
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 6.1e-07 59.7 390 22.6


User provided reference genes

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