Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p008050 Quercus lobata HOM05D009443 ORTHO05D011568 9.7e-33 142.9 73 100.0
Haze_22979 Corylus avellana HOM05D009443 ORTHO05D011568 8.6e-21 103.2 74 70.3
Cfa009607 Carpinus fangiana HOM05D009443 ORTHO05D011568 5.5e-20 100.5 76 71.1
CiPaw.13G174500 Carya illinoinensis HOM05D009443 ORTHO05D011568 2.1e-19 98.6 74 67.6
Prupe.6G009300 Prunus persica HOM05D009443 ORTHO05D011568 3.7e-16 87.8 74 63.5
FAN21G0877 Fragaria x ananassa HOM05D009443 ORTHO05D011568 1.1e-15 86.3 75 60.0
FvH4_3g45180 Fragaria vesca HOM05D009443 ORTHO05D011568 1.4e-15 85.9 75 60.0
FvH4_3g45190 Fragaria vesca HOM05D009443 ORTHO05D011568 3.2e-15 84.7 75 60.0
FAN11G3022 Fragaria x ananassa HOM05D009443 ORTHO05D011568 3.2e-15 84.7 75 60.0
Ciclev10018091m.g Citrus clementina HOM05D009443 ORTHO05D011568 4.1e-15 84.3 76 57.9
COL.COLO4_35004 Corchorus olitorius HOM05D009443 ORTHO05D011568 5.4e-15 84.0 76 57.9
FAN25G1811 Fragaria x ananassa HOM05D009443 ORTHO05D011568 1.2e-14 82.8 75 57.3
Ciclev10017653m.g Citrus clementina HOM05D009443 ORTHO05D011568 1.7e-13 79.0 73 57.5
Thecc.09G211400 Theobroma cacao HOM05D009443 ORTHO05D011568 1.7e-13 79.0 75 57.3
Ciclev10017520m.g Citrus clementina HOM05D009443 ORTHO05D011568 1.2e-11 72.8 73 52.1
Manes.15G106000 Manihot esculenta HOM05D009443 ORTHO05D011568 2.8e-11 71.6 75 49.3
Eucgr.B03622 Eucalyptus grandis HOM05D009443 ORTHO05D011568 4.0e-10 67.8 73 49.3
Glyma.08G112800 Glycine max HOM05D009443 ORTHO05D011568 5.2e-10 67.4 74 52.7
Potri.001G008160 Populus trichocarpa HOM05D009443 ORTHO05D011568 5.2e-10 67.4 74 51.4
Potri.003G217600 Populus trichocarpa HOM05D009443 ORTHO05D011568 1.2e-09 66.2 73 46.6
Cpa.g.sc119.79 Carica papaya HOM05D009443 ORTHO05D011568 7.5e-09 63.5 77 48.1
Potri.001G008080 Populus trichocarpa HOM05D009443 ORTHO05D011568 9.8e-09 63.2 77 48.1
Glyma.05G154900 Glycine max HOM05D009443 ORTHO05D011568 2.9e-08 61.6 76 47.4
DCAR_001988 Daucus carota HOM05D009443 ORTHO05D011568 1.9e-07 58.9 53 50.9
ECA233G3309 Erigeron canadensis HOM05D000476 ORTHO05D004793 1.9e-07 58.9 68 50.0
Sabra01G0006300 Salix brachista HOM05D009443 ORTHO05D011568 2.4e-07 58.5 73 49.3
Lj6g0022333 Lotus japonicus HOM05D009443 ORTHO05D011568 9.2e-07 56.6 74 39.2
Potri.003G217500 Populus trichocarpa HOM05D009443 ORTHO05D011568 1.2e-06 56.2 67 47.8
Sc11g0000030 Simmondsia chinensis HOM05D004039 ORTHO05D004573 2.7e-06 55.1 62 51.6
Atru.chr12.1473 Acer truncatum HOM05D004039 ORTHO05D004573 6.0e-06 53.9 70 41.4
Phvul.002G235100 Phaseolus vulgaris HOM05D009443 ORTHO05D011568 7.8e-06 53.5 73 42.5


User provided reference genes

Program Settings