Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p007608 Quercus lobata HOM05D001111 ORTHO05D000939 4.4e-83 311.2 155 100.0
QL03p060170 Quercus lobata HOM05D001111 ORTHO05D000939 1.6e-29 133.3 89 78.7
FAN07G0616 Fragaria x ananassa HOM05D001111 ORTHO05D000939 7.6e-19 97.8 91 60.4
FAN17G1475 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.8e-18 95.5 91 60.4
FAN22G0614 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.8e-18 95.5 91 60.4
FvH4_4g34370 Fragaria vesca HOM05D001111 ORTHO05D000939 1.4e-17 93.6 91 59.3
FAN12G3240 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.4e-17 93.6 91 59.3
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 4.2e-17 92.0 94 56.4
CiPaw.05G151600 Carya illinoinensis HOM05D001111 ORTHO05D000939 1.2e-16 90.5 91 58.2
CiPaw.06G071600 Carya illinoinensis HOM05D001111 ORTHO05D000939 1.6e-16 90.1 82 62.2
MD13G1092700 Malus domestica HOM05D001111 ORTHO05D000939 1.3e-13 80.5 92 53.3
RcHm_v2.0_Chr4g0443781 Rosa chinensis HOM05D001111 ORTHO05D000939 2.2e-13 79.7 94 51.1
CANSAT01G0717 Cannabis sativa HOM05D001111 ORTHO05D000939 4.8e-13 78.6 93 48.4
Duzib251G0551 Durio zibethinus HOM05D001111 ORTHO05D000939 1.1e-12 77.4 84 51.2
MD16G1093500 Malus domestica HOM05D001111 ORTHO05D000939 1.1e-12 77.4 97 50.5
PGR119G0161 Punica granatum HOM05D001111 ORTHO05D000939 1.8e-12 76.6 84 53.6
Duzib268G1217 Durio zibethinus HOM05D001111 ORTHO05D000939 3.1e-12 75.9 84 52.4
Cfa003475 Carpinus fangiana HOM05D001111 ORTHO05D000939 4.1e-12 75.5 83 55.4
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 4.1e-12 75.5 90 47.8
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 9.0e-12 74.3 91 48.4
ClCG08G018030 Citrullus lanatus HOM05D001111 ORTHO05D000939 2.0e-11 73.2 91 51.6
Thecc.02G251000 Theobroma cacao HOM05D001111 ORTHO05D000939 2.0e-11 73.2 84 51.2
Cfa009151 Carpinus fangiana HOM05D001111 ORTHO05D000939 2.6e-11 72.8 93 50.5
Cpa.g.sc69.47 Carica papaya HOM05D001111 ORTHO05D000939 5.9e-11 71.6 88 47.7
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 7.7e-11 71.2 86 50.0
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 2.9e-10 69.3 90 45.6
Atru.chr11.2037 Acer truncatum HOM05D001111 ORTHO05D000939 5.0e-10 68.6 86 48.8
Gohir.A04G135400 Gossypium hirsutum HOM05D001111 ORTHO05D000939 5.0e-10 68.6 69 49.3
Manes.13G029800 Manihot esculenta HOM05D001111 ORTHO05D000939 1.1e-09 67.4 84 51.2
Gohir.A03G139100 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.4e-09 67.0 84 46.4
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 1.9e-09 66.6 97 42.3
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.9e-09 66.6 90 48.9
Manes.12G028200 Manihot esculenta HOM05D001111 ORTHO05D000939 2.5e-09 66.2 82 51.2
Gohir.D02G162000 Gossypium hirsutum HOM05D001111 ORTHO05D000939 3.2e-09 65.9 84 45.2
Gorai.005G182000 Gossypium raimondii HOM05D001111 ORTHO05D000939 3.2e-09 65.9 84 45.2
Ciclev10032350m.g Citrus clementina HOM05D001111 ORTHO05D000939 5.5e-09 65.1 86 48.8
Dinv24843 Davidia involucrata HOM05D001111 ORTHO05D000939 7.2e-09 64.7 84 47.6
Gohir.D04G178500 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.6e-08 63.5 69 46.4
Gorai.012G171600 Gossypium raimondii HOM05D001111 ORTHO05D000939 1.6e-08 63.5 69 46.4
Dinv02893 Davidia involucrata HOM05D001111 ORTHO05D000939 2.1e-08 63.2 87 40.2
Lj9P449T21 Lonicera japonica HOM05D001111 ORTHO05D000939 2.1e-08 63.2 90 43.3
Oeu040830.1 Olea europaea HOM05D001111 ORTHO05D000939 2.1e-08 63.2 86 45.3
Oeu040831.1 Olea europaea HOM05D001111 ORTHO05D000939 2.1e-08 63.2 86 45.3
Sed0011194 Sechium edule HOM05D001111 ORTHO05D000939 2.7e-08 62.8 84 47.6
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 3.6e-08 62.4 91 41.8
QL05p043982 Quercus lobata HOM05D000003 ORTHO05D000004 6.1e-08 61.6 39 74.4
Lalb_Chr16g0382251 Lupinus albus HOM05D001111 ORTHO05D000939 1.0e-07 60.8 93 39.8
Nitab4.5_0001017g0090 Nicotiana tabacum HOM05D001111 ORTHO05D000939 1.0e-07 60.8 84 42.9
CiPaw.11G026300 Carya illinoinensis HOM05D001111 ORTHO05D000939 2.3e-07 59.7 96 39.6
Glyma.01G030300 Glycine max HOM05D001111 ORTHO05D000939 2.3e-07 59.7 84 50.0
AL1G37460 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 3.0e-07 59.3 119 35.3
Eucgr.B03318 Eucalyptus grandis HOM05D001111 ORTHO05D000939 3.9e-07 58.9 83 37.3
Lj2g0017957 Lotus japonicus HOM05D001111 ORTHO05D000939 5.1e-07 58.5 80 43.8
Ah.02g110500 Amaranthus hybridus HOM05D001111 ORTHO05D000939 6.7e-07 58.2 95 38.9
CDE06G0264 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 6.7e-07 58.2 90 42.2
Manes.14G065800 Manihot esculenta HOM05D001111 ORTHO05D000939 6.7e-07 58.2 97 39.2
Oeu060136.1 Olea europaea HOM05D001111 ORTHO05D000939 6.7e-07 58.2 92 42.4
AT1G23710 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 8.8e-07 57.8 111 36.9
MELO3C012966.2 Cucumis melo HOM05D001111 ORTHO05D000939 8.8e-07 57.8 88 46.6
CsaV3_3G025060 Cucumis sativus L. HOM05D001111 ORTHO05D000939 8.8e-07 57.8 88 46.6
Hma1.2p1_0176F.1_g077400 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 8.8e-07 57.8 89 43.8
Sc04g0001810 Simmondsia chinensis HOM05D001111 ORTHO05D000939 8.8e-07 57.8 99 36.4
CSS0035264 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 1.1e-06 57.4 93 40.9
CSS0041696 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 1.1e-06 57.4 93 40.9
Ca_03154_v3 Cicer arietinum L. HOM05D001111 ORTHO05D000939 1.1e-06 57.4 83 39.8
Ah.11g051620 Amaranthus hybridus HOM05D001111 ORTHO05D000939 1.5e-06 57.0 90 36.7
PSO732G0803 Papaver somniferum HOM05D001111 ORTHO05D000939 1.5e-06 57.0 99 40.4
Prupe.8G179900 Prunus persica HOM05D000331 ORTHO05D002018 1.5e-06 57.0 54 53.7
Cfa019132 Carpinus fangiana HOM05D001111 ORTHO05D000939 2.0e-06 56.6 102 38.2
Migut.L01424 Erythranthe guttata HOM05D001111 ORTHO05D000939 2.0e-06 56.6 95 37.9
Psat2g104240 Pisum sativum HOM05D001111 ORTHO05D000939 2.0e-06 56.6 87 41.4
Sopen06g027760 Solanum pennellii HOM05D001111 ORTHO05D000939 2.0e-06 56.6 78 43.6
CiPaw.12G026500 Carya illinoinensis HOM05D001111 ORTHO05D000939 2.5e-06 56.2 93 37.6
Solyc03g114350.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 2.5e-06 56.2 89 41.6
C05p22910 Brassica napus HOM05D001111 ORTHO05D000939 3.3e-06 55.8 100 38.0
Dinv33484 Davidia involucrata HOM05D001111 ORTHO05D000939 3.3e-06 55.8 95 40.0
Thhalv10008273m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 3.3e-06 55.8 68 50.0
MSTRG.23129 Avicennia marina HOM05D001111 ORTHO05D000939 4.3e-06 55.5 96 39.6
MSTRG.2399 Avicennia marina HOM05D001111 ORTHO05D000939 4.3e-06 55.5 72 41.7
BcaNung06891 Brassica carinata HOM05D001111 ORTHO05D000939 4.3e-06 55.5 100 38.0
BolC5t30991H Brassica oleracea HOM05D001111 ORTHO05D000939 4.3e-06 55.5 100 38.0
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 4.3e-06 55.5 97 39.2
Phvul.002G071000 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 4.3e-06 55.5 85 43.5
PGSC0003DMG400045223 Solanum tuberosum HOM05D001111 ORTHO05D000939 4.3e-06 55.5 92 42.4
A09p41100 Brassica napus HOM05D001111 ORTHO05D000939 5.7e-06 55.1 71 45.1
BolC6t39498H Brassica oleracea HOM05D001111 ORTHO05D000939 5.7e-06 55.1 86 41.9
Sopen03g033450 Solanum pennellii HOM05D001111 ORTHO05D000939 5.7e-06 55.1 89 42.7
Thecc.03G012600 Theobroma cacao HOM05D001111 ORTHO05D000939 5.7e-06 55.1 98 39.8
Actinidia33068 Actinidia chinensis HOM05D001111 ORTHO05D000939 7.4e-06 54.7 95 38.9
MSTRG.7903 Avicennia marina HOM05D001111 ORTHO05D000939 7.4e-06 54.7 90 37.8
BraA09t39602Z Brassica rapa HOM05D001111 ORTHO05D000939 7.4e-06 54.7 86 41.9
SGA_v2.0_scaffold8G04207 Striga asiatica HOM05D001111 ORTHO05D000939 7.4e-06 54.7 71 40.8
TPR.G21083 Trifolium pratense HOM05D001111 ORTHO05D000939 7.4e-06 54.7 61 50.8
VMungo1215G0354 Vigna mungo HOM05D001111 ORTHO05D000939 7.4e-06 54.7 69 49.3
ClCG06G017020 Citrullus lanatus HOM05D001111 ORTHO05D000939 9.7e-06 54.3 93 37.6


User provided reference genes

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