Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p005881 Quercus lobata HOM05D006389 ORTHO05D007863 2.9e-34 147.9 69 100.0
QL01p005785 Quercus lobata HOM05D148482 ORTHO05D337006 5.8e-19 97.1 51 92.2
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 1.6e-13 79.0 79 57.0
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 4.0e-12 74.3 79 53.2
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 1.2e-11 72.8 79 51.9
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 3.8e-10 67.8 79 46.8
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 6.4e-10 67.0 54 63.0
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.9e-09 65.5 54 55.6
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 5.4e-09 63.9 54 57.4
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 2.7e-08 61.6 54 59.3
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 4.6e-08 60.8 78 43.6
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 4.6e-08 60.8 54 59.3
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 1.0e-07 59.7 79 45.6
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 2.3e-07 58.5 79 43.0
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 3.0e-07 58.2 79 45.6
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 3.9e-07 57.8 79 40.5
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 5.1e-07 57.4 79 44.3
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 5.1e-07 57.4 79 43.0
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 5.1e-07 57.4 79 43.0
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.1e-06 56.2 74 44.6
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 1.1e-06 56.2 74 44.6
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 1.1e-06 56.2 79 43.0
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 1.1e-06 56.2 79 40.5
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 1.5e-06 55.8 79 39.2
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.9e-06 55.5 79 40.5
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 1.9e-06 55.5 78 41.0
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 2.5e-06 55.1 74 44.6
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 3.3e-06 54.7 79 40.5
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 3.3e-06 54.7 74 45.9
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 4.3e-06 54.3 79 41.8
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 5.6e-06 53.9 79 43.0
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 5.6e-06 53.9 78 46.2
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 7.4e-06 53.5 79 40.5
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 9.6e-06 53.1 79 40.5


User provided reference genes

Program Settings