Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 0.0e+00 2063.1 1067 100.0
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 0.0e+00 1685.2 1067 81.7
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 0.0e+00 1641.3 1065 79.4
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 0.0e+00 1602.4 1155 73.4
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 0.0e+00 1542.3 1061 74.5
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 0.0e+00 1523.5 1061 73.8
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 0.0e+00 1511.9 1061 74.3
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 0.0e+00 1505.7 1105 70.8
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 0.0e+00 1489.2 1063 71.6
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 0.0e+00 1459.9 1125 68.1
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 0.0e+00 1454.5 1076 69.8
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 0.0e+00 1451.4 1061 71.1
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 0.0e+00 1448.3 1076 69.5
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 0.0e+00 1447.6 1076 69.2
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 0.0e+00 1429.8 1065 69.5
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 0.0e+00 1427.5 1061 69.0
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 0.0e+00 1427.2 1061 69.0
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 0.0e+00 1425.6 1060 68.9
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 0.0e+00 1424.1 1070 68.0
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 0.0e+00 1423.7 1067 68.0
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 0.0e+00 1422.9 1062 69.0
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 0.0e+00 1421.0 1076 68.8
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 0.0e+00 1416.0 1059 68.7
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 0.0e+00 1413.7 1061 69.2
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 0.0e+00 1411.0 1060 70.0
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 0.0e+00 1406.7 1069 68.8
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 0.0e+00 1406.3 1069 68.1
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 0.0e+00 1405.2 1094 66.7
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 0.0e+00 1402.5 1077 67.6
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 0.0e+00 1399.4 1069 68.1
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 0.0e+00 1397.9 1059 68.2
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 0.0e+00 1397.1 1064 68.8
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 0.0e+00 1396.3 1069 68.4
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 0.0e+00 1392.1 1079 67.8
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 0.0e+00 1388.6 1064 68.1
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 0.0e+00 1388.6 1061 68.6
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 0.0e+00 1387.1 1064 68.1
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 0.0e+00 1382.9 1063 67.7
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 0.0e+00 1379.4 1059 66.8
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 0.0e+00 1379.0 1060 66.9
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 0.0e+00 1378.6 1064 67.0
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 0.0e+00 1377.8 1061 68.1
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 0.0e+00 1375.9 1087 66.6
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 0.0e+00 1369.8 1060 66.4
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 0.0e+00 1368.2 1059 67.9
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 0.0e+00 1367.4 1063 67.7
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 0.0e+00 1365.1 1061 67.1
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 0.0e+00 1364.7 1048 68.4
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 0.0e+00 1364.0 1062 65.6
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 0.0e+00 1360.1 1064 66.4
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 0.0e+00 1359.4 1065 67.9
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 0.0e+00 1356.7 1062 66.5
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 0.0e+00 1354.7 1062 66.3
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 0.0e+00 1350.5 1183 62.5
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 0.0e+00 1349.3 1061 66.2
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 0.0e+00 1345.1 1057 65.2
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 0.0e+00 1341.6 1064 66.3
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 0.0e+00 1341.6 1062 65.3
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 0.0e+00 1338.2 1062 65.5
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 0.0e+00 1337.8 1065 67.7
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 0.0e+00 1337.4 1068 66.7
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 0.0e+00 1337.0 1072 67.4
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 0.0e+00 1336.6 1057 65.2
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 0.0e+00 1336.2 1057 64.8
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 0.0e+00 1333.5 1062 65.3
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 0.0e+00 1332.4 1062 65.3
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 0.0e+00 1330.9 1062 64.7
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 0.0e+00 1325.8 1076 64.4
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 0.0e+00 1324.7 1067 66.9
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 0.0e+00 1321.6 1058 64.7
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 0.0e+00 1319.3 1058 64.7
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 0.0e+00 1317.0 1081 66.1
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 0.0e+00 1314.3 1069 65.1
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 0.0e+00 1310.0 1071 65.4
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 0.0e+00 1296.6 1066 62.8
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 0.0e+00 1290.0 1067 64.0
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 0.0e+00 1289.6 1072 63.2
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 0.0e+00 1289.2 1062 62.8
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 0.0e+00 1286.9 1067 65.1
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 0.0e+00 1286.6 1161 61.8
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 0.0e+00 1284.2 1063 62.3
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 0.0e+00 1278.8 1003 64.8
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 0.0e+00 1278.8 1067 64.8
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 0.0e+00 1278.5 1063 64.2
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 0.0e+00 1275.4 1069 62.2
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 0.0e+00 1274.2 1090 63.4
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 0.0e+00 1269.2 1003 64.2
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 0.0e+00 1268.8 1010 64.8
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 0.0e+00 1265.0 1074 62.0
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 0.0e+00 1263.4 1069 61.8
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 0.0e+00 1263.4 1065 62.3
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 0.0e+00 1258.0 1078 61.3
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 0.0e+00 1247.3 1069 60.7
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 0.0e+00 1246.1 1069 62.7
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 0.0e+00 1240.3 1062 61.9
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 0.0e+00 1236.5 1059 63.2
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 0.0e+00 1234.9 1064 61.3
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 0.0e+00 1225.3 1009 65.0
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 0.0e+00 1218.4 1085 61.3
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 0.0e+00 1200.7 1063 60.8
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 0.0e+00 1196.8 953 66.2
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 0.0e+00 1173.7 1011 61.3
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 0.0e+00 1151.7 950 64.8
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 0.0e+00 1139.8 1093 56.9
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 0.0e+00 1125.5 1100 54.9
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 0.0e+00 1098.6 894 63.9
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 0.0e+00 1080.9 1084 53.6
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 0.0e+00 1078.5 706 78.2
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 1.8e-308 1062.8 694 78.1
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 4.4e-307 1058.1 1015 54.9
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 2.8e-306 1055.4 1097 53.3
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 6.5e-303 1044.3 1000 57.3
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 3.2e-302 1042.0 1134 51.5
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 4.2e-294 1015.0 1099 51.1
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 2.3e-292 1009.2 1093 51.1
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 3.3e-286 988.8 892 58.6
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 2.3e-284 982.6 725 69.2
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.1e-281 973.8 1029 51.4
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 3.7e-274 948.7 1076 51.2
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 9.6e-246 854.4 1012 48.7
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.1e-245 851.3 971 48.1
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 3.2e-241 839.3 938 50.9
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 2.6e-235 819.7 589 72.2
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 6.9e-220 768.5 1130 40.8
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.1e-204 718.0 1115 39.1
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 3.2e-201 706.4 507 72.6
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 1.2e-195 688.0 1134 38.2
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 3.4e-174 616.7 1056 38.4
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 1.7e-165 587.8 456 67.1
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-155 554.7 666 45.6
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 6.9e-127 459.5 504 51.8
Atru.chr10.123 Acer truncatum HOM05D003580 ORTHO05D004441 1.7e-125 454.9 355 68.5
CDE02G3888 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 2.9e-125 454.1 463 53.8
SEGI_02361 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.5e-124 449.9 393 60.6
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 4.8e-120 436.8 738 36.4
Atru.chr10.105 Acer truncatum HOM05D003580 ORTHO05D004441 4.3e-105 387.1 309 69.3
QL01p051634 Quercus lobata HOM05D003580 ORTHO05D004441 2.8e-96 357.8 297 66.3
BcaNung02234 Brassica carinata HOM05D003580 ORTHO05D004441 7.9e-91 339.7 338 57.7
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-89 334.3 752 31.2
Pp3c22_14630 Physcomitrium patens HOM05D003580 ORTHO05D004441 5.3e-87 327.0 1035 28.4
Cpa.g.sc272.6 Carica papaya HOM05D003580 ORTHO05D004441 4.2e-68 264.2 159 81.1
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.7e-65 253.8 393 37.9
QL01p051611 Quercus lobata HOM05D003580 ORTHO05D004441 3.3e-60 238.0 119 98.3
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.6e-59 234.6 372 36.3
SGA_v2.0_scaffold1489G53965 Striga asiatica HOM05D003580 ORTHO05D004441 8.0e-59 233.4 202 59.9
MCO16G457 Micromonas commoda HOM05D003580 ORTHO05D004441 5.7e-57 227.3 995 24.0
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.2e-55 219.9 292 40.1
PRCOL_00004619 Prasinoderma coloniale HOM05D003580 ORTHO05D004441 1.5e-52 212.6 1022 23.8
arahy.Tifrunner.gnm1.ann1.G7UC7Z Arachis hypogaea HOM05D003580 ORTHO05D004441 6.2e-51 207.2 160 65.0
arahy.Tifrunner.gnm1.ann1.0G6L2R Arachis hypogaea HOM05D003580 ORTHO05D004441 8.0e-51 206.8 160 64.4
CBR_g38824 Chara braunii HOM05D003580 ORTHO05D000002 3.4e-49 201.4 274 42.3
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.3e-48 196.8 296 37.8
QL01p051624 Quercus lobata HOM05D003580 ORTHO05D004441 8.9e-42 176.8 94 94.7
FvH4_3g34230 Fragaria vesca HOM05D003580 ORTHO05D004441 1.5e-41 176.0 165 57.0
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 2.6e-41 175.3 296 35.5
Cre14.g628050 Chlamydomonas reinhardtii HOM05D003580 ORTHO05D004441 9.8e-41 173.3 1278 21.4
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.4e-39 167.5 168 47.6
TPR.G7717 Trifolium pratense HOM05D003580 ORTHO05D004441 1.3e-37 162.9 126 64.3
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.3e-36 158.3 169 44.4
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.1e-35 153.7 156 46.8
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.2e-32 145.6 154 45.5
BcaB04g17891 Brassica carinata HOM05D003580 ORTHO05D004441 3.8e-32 144.8 98 73.5
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.4e-31 142.9 136 48.5
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.0e-30 137.5 150 43.3
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.5e-28 132.9 146 44.5
Actinidia22485 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.9e-28 132.5 188 43.6
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.4e-25 121.3 131 47.3
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.8e-25 120.9 332 26.8
Cpa.g.c39794 Carica papaya HOM05D003580 ORTHO05D004441 4.9e-24 117.9 65 86.2
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 4.6e-22 111.3 125 41.6
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.9e-21 108.2 130 41.5
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.6e-21 107.5 132 42.4
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 1.1e-20 106.7 129 41.1
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.4e-18 99.8 119 38.7
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.8e-18 99.4 98 49.0
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.6e-17 95.5 103 41.7
PSO063G6607 Papaver somniferum HOM05D003580 ORTHO05D004441 4.9e-16 91.3 97 52.6
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-15 90.1 117 37.6
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.9e-13 81.6 109 40.4
Medtr1g492720 Medicago truncatula HOM05D003580 ORTHO05D004441 4.3e-12 78.2 60 70.0
SEGI_06299 Sequoiadendron giganteum HOM05D003580 ORTHO05D019257 2.8e-11 75.5 66 53.0
VMungo1383G0656 Vigna mungo HOM05D003580 ORTHO05D004441 2.9e-08 65.5 51 70.6


User provided reference genes

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