Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p004584 Quercus lobata HOM05D004268 ORTHO05D004958 1.6e-50 202.6 110 100.0
QL01p004491 Quercus lobata HOM05D004268 ORTHO05D004958 8.3e-36 153.7 110 79.1
CiPaw.13G159300 Carya illinoinensis HOM05D004268 ORTHO05D004958 1.3e-28 129.8 111 68.5
CiPaw.14G118100 Carya illinoinensis HOM05D004268 ORTHO05D004958 1.4e-27 126.3 110 68.2
Haze_23147 Corylus avellana HOM05D004268 ORTHO05D004958 1.6e-26 122.9 111 72.1
Cpa.g.sc84.45 Carica papaya HOM05D004268 ORTHO05D004958 2.7e-26 122.1 107 64.5
Cfa009783 Carpinus fangiana HOM05D004268 ORTHO05D004958 4.6e-26 121.3 110 70.0
FAN25G2913 Fragaria x ananassa HOM05D004268 ORTHO05D004958 1.1e-24 116.7 109 67.0
Actinidia23976 Actinidia chinensis HOM05D004268 ORTHO05D004958 1.9e-24 115.9 111 56.8
Manes.06G163500 Manihot esculenta HOM05D004268 ORTHO05D004958 9.5e-24 113.6 110 65.5
RcHm_v2.0_Chr5g0052351 Rosa chinensis HOM05D004268 ORTHO05D004958 9.5e-24 113.6 109 65.1
Duzib150G0004 Durio zibethinus HOM05D004268 ORTHO05D004958 2.8e-23 112.1 106 60.4
TWI34G1192 Tripterygium wilfordii HOM05D004268 ORTHO05D004958 4.7e-23 111.3 109 63.3
Gohir.A09G113900 Gossypium hirsutum HOM05D004268 ORTHO05D004958 3.1e-22 108.6 112 58.0
Gohir.D09G110500 Gossypium hirsutum HOM05D004268 ORTHO05D004958 3.1e-22 108.6 112 58.0
Cc06_g23280 Coffea canephora HOM05D004268 ORTHO05D004958 4.0e-22 108.2 113 64.6
Potri.001G256900 Populus trichocarpa HOM05D004268 ORTHO05D004958 4.0e-22 108.2 108 63.9
Nn2g15305 Nelumbo nucifera HOM05D004268 ORTHO05D004958 3.4e-21 105.1 108 56.5
VMungo1127G0621 Vigna mungo HOM05D004268 ORTHO05D004958 7.6e-21 104.0 110 57.3
Duzib168G1465 Durio zibethinus HOM05D004268 ORTHO05D004958 9.9e-21 103.6 109 55.0
Psat7g196400 Pisum sativum HOM05D004268 ORTHO05D004958 2.2e-20 102.4 111 55.0
AUR62019312 Chenopodium quinoa HOM05D004268 ORTHO05D004958 3.8e-20 101.7 108 60.2
ClCG02G023150 Citrullus lanatus HOM05D004268 ORTHO05D004958 3.8e-20 101.7 109 62.4
PGR102G2953 Punica granatum HOM05D004268 ORTHO05D004958 4.9e-20 101.3 114 56.1
Atru.chr3.2699 Acer truncatum HOM05D004268 ORTHO05D004958 6.4e-20 100.9 110 60.0
EL10Ac4g10238 Beta vulgaris HOM05D004268 ORTHO05D004958 6.4e-20 100.9 107 57.0
Phvul.011G009700 Phaseolus vulgaris HOM05D004268 ORTHO05D004958 8.4e-20 100.5 110 57.3
TPR.G3668 Trifolium pratense HOM05D004268 ORTHO05D004958 8.4e-20 100.5 109 56.0
Peaxi162Scf00032g00063 Petunia axillaris HOM05D004268 ORTHO05D004958 1.1e-19 100.1 109 56.0
MELO3C014587.2 Cucumis melo HOM05D004268 ORTHO05D004958 1.4e-19 99.8 109 59.6
QL04p008292 Quercus lobata HOM05D004268 ORTHO05D004958 1.4e-19 99.8 109 56.0
TAR633G1399 Trochodendron aralioides HOM05D004268 ORTHO05D004958 1.9e-19 99.4 110 53.6
Glyma.15G275600 Glycine max HOM05D004268 ORTHO05D004958 2.4e-19 99.0 108 55.6
Medtr3g030850 Medicago truncatula HOM05D004268 ORTHO05D004958 2.4e-19 99.0 111 58.6
AUR62000132 Chenopodium quinoa HOM05D004268 ORTHO05D004958 4.1e-19 98.2 108 59.3
DCAR_029953 Daucus carota HOM05D004268 ORTHO05D004958 7.1e-19 97.4 108 53.7
Aa31LG10G3570 Aethionema arabicum HOM05D004268 ORTHO05D004958 2.1e-18 95.9 113 55.8
Hma1.2p1_0368F.1_g137310 Hydrangea macrophylla HOM05D004268 ORTHO05D004958 2.1e-18 95.9 110 54.5
Lsat_1_v5_gn_6_25460 Lactuca sativa HOM05D004268 ORTHO05D004958 2.1e-18 95.9 112 53.6
COL.COLO4_06120 Corchorus olitorius HOM05D004268 ORTHO05D004958 2.7e-18 95.5 108 52.8
Glyma.15G275700 Glycine max HOM05D004268 ORTHO05D004958 2.7e-18 95.5 109 56.0
Lj3g0019333 Lotus japonicus HOM05D004268 ORTHO05D004958 2.7e-18 95.5 111 52.3
Thecc.01G409600 Theobroma cacao HOM05D004268 ORTHO05D004958 2.7e-18 95.5 108 59.3
Medtr4g037505 Medicago truncatula HOM05D004268 ORTHO05D004958 3.5e-18 95.1 109 54.1
Rhsim01G0192200 Rhododendron simsii HOM05D004268 ORTHO05D004958 3.5e-18 95.1 108 53.7
TPR.G35302 Trifolium pratense HOM05D004268 ORTHO05D004958 3.5e-18 95.1 110 57.3
Atru.chr11.2609 Acer truncatum HOM05D004268 ORTHO05D004958 4.6e-18 94.7 108 50.9
Cpa.g.sc125.13 Carica papaya HOM05D004268 ORTHO05D004958 6.0e-18 94.4 109 55.0
Psat5g208760 Pisum sativum HOM05D004268 ORTHO05D004958 6.0e-18 94.4 111 56.8
AL1G59250 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 7.8e-18 94.0 109 55.0
Sp1g38070 Schrenkiella parvula HOM05D004268 ORTHO05D004958 7.8e-18 94.0 109 55.0
AT1G51400 Arabidopsis thaliana HOM05D004268 ORTHO05D004958 1.0e-17 93.6 109 55.0
CARHR041550 Cardamine hirsuta HOM05D004268 ORTHO05D004958 1.7e-17 92.8 109 55.0
DCAR_002077 Daucus carota HOM05D004268 ORTHO05D004958 1.7e-17 92.8 112 51.8
DCAR_031628 Daucus carota HOM05D004268 ORTHO05D004958 1.7e-17 92.8 113 53.1
Duzib138G1697 Durio zibethinus HOM05D004268 ORTHO05D004958 3.0e-17 92.0 108 52.8
Ah.06g194080 Amaranthus hybridus HOM05D004268 ORTHO05D004958 3.9e-17 91.7 107 58.9
Medtr3g030860 Medicago truncatula HOM05D004268 ORTHO05D004958 5.1e-17 91.3 108 56.5
Sc09g0000770 Simmondsia chinensis HOM05D004268 ORTHO05D004958 5.1e-17 91.3 108 55.6
HanXRQChr02g0052031 Helianthus annuus HOM05D004268 ORTHO05D004958 6.6e-17 90.9 115 51.3
Gohir.D08G164800 Gossypium hirsutum HOM05D004268 ORTHO05D004958 8.7e-17 90.5 109 52.3
SGA_v2.0_scaffold3G01494 Striga asiatica HOM05D004268 ORTHO05D004958 8.7e-17 90.5 108 50.0
Glyma.10G089500 Glycine max HOM05D004268 ORTHO05D004958 1.1e-16 90.1 109 53.2
Gorai.004G171800 Gossypium raimondii HOM05D004268 ORTHO05D004958 1.1e-16 90.1 109 52.3
Gohir.A08G143800 Gossypium hirsutum HOM05D004268 ORTHO05D004958 1.5e-16 89.7 109 52.3
TPR.G35305 Trifolium pratense HOM05D004268 ORTHO05D004958 1.5e-16 89.7 108 57.4
Thhalv10011883m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 1.9e-16 89.4 109 52.3
Potri.009G052500 Populus trichocarpa HOM05D004268 ORTHO05D004958 1.9e-16 89.4 110 54.5
Sed0017781 Sechium edule HOM05D004268 ORTHO05D004958 1.9e-16 89.4 113 49.6
EL10Ac2g04340 Beta vulgaris HOM05D004268 ORTHO05D004958 2.5e-16 89.0 108 48.1
Peaxi162Scf00004g00263 Petunia axillaris HOM05D004268 ORTHO05D004958 3.3e-16 88.6 107 52.3
Sed0025860 Sechium edule HOM05D004268 ORTHO05D004958 3.3e-16 88.6 114 54.4
Duzib133G0767 Durio zibethinus HOM05D004268 ORTHO05D004958 4.3e-16 88.2 108 50.9
FAN21G1561 Fragaria x ananassa HOM05D004268 ORTHO05D004958 4.3e-16 88.2 111 54.1
Lj3g0003624 Lotus japonicus HOM05D004268 ORTHO05D004958 4.3e-16 88.2 106 50.9
A06p02510 Brassica napus HOM05D004268 ORTHO05D004958 5.6e-16 87.8 110 53.6
Oeu063326.1 Olea europaea HOM05D004268 ORTHO05D004958 5.6e-16 87.8 109 53.2
FvH4_3g28710 Fragaria vesca HOM05D004268 ORTHO05D004958 7.3e-16 87.4 109 55.0
FAN11G3362 Fragaria x ananassa HOM05D004268 ORTHO05D004958 7.3e-16 87.4 109 55.0
Peaxi162Scf00032g00064 Petunia axillaris HOM05D004268 ORTHO05D004958 7.3e-16 87.4 108 47.2
Ciclev10017247m.g Citrus clementina HOM05D004268 ORTHO05D004958 9.6e-16 87.0 112 50.9
Prupe.4G250700 Prunus persica HOM05D004268 ORTHO05D004958 1.6e-15 86.3 111 51.4
PGR119G0693 Punica granatum HOM05D004268 ORTHO05D004958 1.6e-15 86.3 110 50.9
THA.LOC104816876 Tarenaya hassleriana HOM05D004268 ORTHO05D004958 3.6e-15 85.1 115 50.4
THA.LOC104817911 Tarenaya hassleriana HOM05D004268 ORTHO05D004958 4.7e-15 84.7 111 48.6
BcaC08g43309 Brassica carinata HOM05D004268 ORTHO05D004958 6.2e-15 84.3 110 50.9
C06p06560 Brassica napus HOM05D004268 ORTHO05D004958 6.2e-15 84.3 110 50.9
BolC6t35768H Brassica oleracea HOM05D004268 ORTHO05D004958 6.2e-15 84.3 110 50.9
Glyma.10G089300 Glycine max HOM05D004268 ORTHO05D004958 6.2e-15 84.3 112 50.9
Nitab4.5_0004741g0020 Nicotiana tabacum HOM05D004268 ORTHO05D004958 8.1e-15 84.0 97 54.6
Carub.0003s2095 Capsella rubella HOM05D004268 ORTHO05D004958 1.4e-14 83.2 109 50.5
Ca_14452_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 1.4e-14 83.2 107 51.4
Ca_14453_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 1.4e-14 83.2 107 51.4
Thhalv10021813m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 1.4e-14 83.2 109 49.5
FAN16G2720 Fragaria x ananassa HOM05D004268 ORTHO05D004958 1.8e-14 82.8 109 53.2
Dinv09347 Davidia involucrata HOM05D004268 ORTHO05D004958 2.4e-14 82.4 98 53.1
MBI04_g40114_MAGBIO Magnolia biondii HOM05D000074 ORTHO05D000220 3.1e-14 82.0 113 47.8
Thecc.09G235200 Theobroma cacao HOM05D004268 ORTHO05D004958 3.1e-14 82.0 111 49.5
Ciclev10033132m.g Citrus clementina HOM05D004268 ORTHO05D004958 4.0e-14 81.6 117 47.9
Aa31LG8G7770 Aethionema arabicum HOM05D004268 ORTHO05D004958 5.2e-14 81.3 108 50.9
C03p51410 Brassica napus HOM05D004268 ORTHO05D004958 6.9e-14 80.9 108 48.1
CARHR096900 Cardamine hirsuta HOM05D004268 ORTHO05D004958 9.0e-14 80.5 109 51.4
Eucgr.B03692 Eucalyptus grandis HOM05D004268 ORTHO05D004958 9.0e-14 80.5 109 51.4
MD11G1191900 Malus domestica HOM05D004268 ORTHO05D004958 9.0e-14 80.5 114 50.9
MBI02_g05661_MAGBIO Magnolia biondii HOM05D004268 ORTHO05D004958 1.2e-13 80.1 117 48.7
TWI32G0064 Tripterygium wilfordii HOM05D004268 ORTHO05D004958 1.2e-13 80.1 110 50.9
Dinv22170 Davidia involucrata HOM05D004268 ORTHO05D004958 1.5e-13 79.7 93 52.7
BraA03t13354Z Brassica rapa HOM05D004268 ORTHO05D004958 2.0e-13 79.3 109 47.7
CDE05G0821 Ceratophyllum demersum HOM05D004268 ORTHO05D004958 2.0e-13 79.3 104 49.0
PSO541G0301 Papaver somniferum HOM05D004268 ORTHO05D004958 2.0e-13 79.3 112 50.0
QL01p004463 Quercus lobata HOM05D004673 ORTHO05D005596 4.4e-13 78.2 45 91.1
BraA05t21659Z Brassica rapa HOM05D004268 ORTHO05D004958 7.6e-13 77.4 108 48.1
Manes.14G003500 Manihot esculenta HOM05D004268 ORTHO05D004958 2.2e-12 75.9 112 50.0
AT3G21055 Arabidopsis thaliana HOM05D004268 ORTHO05D004958 2.9e-12 75.5 109 47.7
CDE05G3212 Ceratophyllum demersum HOM05D004268 ORTHO05D004958 2.9e-12 75.5 104 46.2
MD03G1173700 Malus domestica HOM05D004268 ORTHO05D004958 2.9e-12 75.5 114 48.2
Ah.10g038780 Amaranthus hybridus HOM05D000040 ORTHO05D000267 3.8e-12 75.1 105 46.7
Actinidia16340 Actinidia chinensis HOM05D004268 ORTHO05D004958 6.4e-12 74.3 97 54.6
AL3G35000 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 6.4e-12 74.3 109 47.7
BcaB06g26173 Brassica carinata HOM05D004268 ORTHO05D004958 6.4e-12 74.3 109 47.7
BcaC05g28213 Brassica carinata HOM05D004268 ORTHO05D004958 6.4e-12 74.3 108 46.3
C05p43040 Brassica napus HOM05D004268 ORTHO05D004958 6.4e-12 74.3 108 46.3
BolC5t33035H Brassica oleracea HOM05D004268 ORTHO05D004958 6.4e-12 74.3 108 46.3
A05p27660 Brassica napus HOM05D004268 ORTHO05D004958 1.1e-11 73.6 108 44.4
ECA233G4176 Erigeron canadensis HOM05D004268 ORTHO05D004958 1.4e-11 73.2 114 50.0
TAR623G0940 Trochodendron aralioides HOM05D004268 ORTHO05D004958 2.4e-11 72.4 107 45.8
CANSAT54G2544 Cannabis sativa HOM05D004268 ORTHO05D004958 3.2e-11 72.0 112 46.4
BcaC01g03530 Brassica carinata HOM05D004268 ORTHO05D004958 4.2e-11 71.6 108 43.5
BolC3t17427H Brassica oleracea HOM05D004268 ORTHO05D004958 4.2e-11 71.6 108 43.5
Nn7g36237 Nelumbo nucifera HOM05D004268 ORTHO05D004958 4.2e-11 71.6 114 42.1
Nn7g36238 Nelumbo nucifera HOM05D004268 ORTHO05D004958 4.2e-11 71.6 114 42.1
unitig_8.g2993 Utricularia gibba HOM05D004268 ORTHO05D004958 4.2e-11 71.6 106 47.2
Nitab4.5_0002741g0120 Nicotiana tabacum HOM05D004268 ORTHO05D004958 9.3e-11 70.5 108 44.4
CSS0050517 Camellia sinensis var. sinensis HOM05D004268 ORTHO05D004958 1.2e-10 70.1 113 44.2
CAN.G821.8 Capsicum annuum HOM05D004268 ORTHO05D004958 2.7e-10 68.9 86 48.8
Rhsim01G0129200 Rhododendron simsii HOM05D000074 ORTHO05D004958 4.6e-10 68.2 99 49.5
Oeu033136.1 Olea europaea HOM05D004268 ORTHO05D004958 1.7e-09 66.2 39 79.5
PGSC0003DMG400010498 Solanum tuberosum HOM05D004268 ORTHO05D004958 1.7e-09 66.2 88 51.1
Migut.N02326 Erythranthe guttata HOM05D004268 ORTHO05D004958 2.3e-09 65.9 37 78.4
Dinv43432 Davidia involucrata HOM05D004268 ORTHO05D004958 3.9e-09 65.1 95 49.5
Lalb_Chr01g0000351 Lupinus albus HOM05D004268 ORTHO05D004958 3.9e-09 65.1 107 43.0
SEGI_11181 Sequoiadendron giganteum HOM05D004268 ORTHO05D004958 6.6e-09 64.3 119 37.0
CSS0020424 Camellia sinensis var. sinensis HOM05D004268 ORTHO05D004958 1.9e-08 62.8 107 37.4
Solyc01g008510.3 Solanum lycopersicum HOM05D004268 ORTHO05D004958 7.3e-08 60.8 118 44.9
Os02g0581100 Oryza sativa ssp. japonica HOM05D004268 ORTHO05D004958 9.6e-08 60.5 123 41.5
Sopen01g004050 Solanum pennellii HOM05D004268 ORTHO05D004958 1.3e-07 60.1 118 43.2
Nitab4.5_0004438g0050 Nicotiana tabacum HOM05D004268 ORTHO05D004958 2.8e-07 58.9 113 39.8
PGSC0003DMG400019098 Solanum tuberosum HOM05D004268 ORTHO05D004958 2.8e-07 58.9 85 48.2
Aqoxy1G00277 Aquilegia oxysepala HOM05D004268 ORTHO05D004958 3.6e-07 58.5 38 71.1
PGSC0003DMG400004639 Solanum tuberosum HOM05D004268 ORTHO05D004958 8.1e-07 57.4 110 39.1
BcaC09g49044 Brassica carinata HOM05D004268 ORTHO05D004958 1.4e-06 56.6 110 36.4
CBR_g18875 Chara braunii HOM05D024154 ORTHO05D023530 1.4e-06 56.6 118 39.0
Nitab4.5_0000570g0060 Nicotiana tabacum HOM05D004268 ORTHO05D004958 1.4e-06 56.6 113 38.1
Potri.001G265000 Populus trichocarpa HOM05D004268 ORTHO05D004958 1.4e-06 56.6 90 46.7
C01p43220 Brassica napus HOM05D004268 ORTHO05D004958 5.3e-06 54.7 109 38.5


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