Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p001738 Quercus lobata HOM05D007874 ORTHO05D009614 2.9e-79 298.5 150 100.0
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 5.1e-36 154.8 153 58.8
QL01p001235 Quercus lobata HOM05D007874 ORTHO05D009614 9.9e-32 140.6 152 61.8
Haze_11010 Corylus avellana HOM05D007874 ORTHO05D009614 1.9e-30 136.3 149 57.0
CiPaw.06G012000 Carya illinoinensis HOM05D007874 ORTHO05D009614 1.0e-28 130.6 154 54.5
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 7.6e-24 114.4 147 51.7
Potri.008G129200 Populus trichocarpa HOM05D007874 ORTHO05D009614 4.9e-23 111.7 136 50.0
Thecc.02G281500 Theobroma cacao HOM05D007874 ORTHO05D009614 8.4e-23 110.9 156 48.7
Manes.17G076900 Manihot esculenta HOM05D007874 ORTHO05D009614 1.3e-20 103.6 136 47.1
Duzib251G0922 Durio zibethinus HOM05D007874 ORTHO05D009614 1.8e-20 103.2 152 46.7
Sabra10G0083200 Salix brachista HOM05D007874 ORTHO05D009614 2.2e-18 96.3 121 47.9
CANSAT01G3222 Cannabis sativa HOM05D007874 ORTHO05D009614 4.8e-18 95.1 147 42.9
PGR102G2496 Punica granatum HOM05D007874 ORTHO05D009614 1.4e-17 93.6 146 43.8
Dinv05171 Davidia involucrata HOM05D007874 ORTHO05D009614 2.4e-17 92.8 125 46.4
Cpa.g.sc65.135 Carica papaya HOM05D007874 ORTHO05D009614 5.3e-17 91.7 118 49.2
Gorai.002G179200 Gossypium raimondii HOM05D007874 ORTHO05D009614 9.0e-17 90.9 151 45.7
Hma1.2p1_0096F.1_g047930 Hydrangea macrophylla HOM05D007874 ORTHO05D009614 6.5e-15 84.7 146 40.4
Manes.15G127500 Manihot esculenta HOM05D007874 ORTHO05D009614 1.1e-14 84.0 126 43.7
EL10Ac6g14213 Beta vulgaris HOM05D007874 ORTHO05D009614 2.5e-14 82.8 116 46.6
Gohir.D01G145200 Gossypium hirsutum HOM05D007874 ORTHO05D009614 1.6e-13 80.1 155 42.6
MSTRG.901 Avicennia marina HOM05D007874 ORTHO05D009614 2.1e-13 79.7 142 40.8
Duzib248G1518 Durio zibethinus HOM05D007874 ORTHO05D009614 2.7e-13 79.3 112 49.1
Sabra08G0097900 Salix brachista HOM05D007874 ORTHO05D009614 3.0e-12 75.9 137 40.9
Psat7g128240 Pisum sativum HOM05D007874 ORTHO05D009614 1.1e-11 73.9 148 37.8
Lsat_1_v5_gn_3_54800 Lactuca sativa HOM05D007874 ORTHO05D009614 2.5e-11 72.8 129 43.4
Potri.010G113100 Populus trichocarpa HOM05D007874 ORTHO05D009614 3.3e-11 72.4 139 40.3
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 4.3e-11 72.0 97 48.5
Nitab4.5_0002523g0020 Nicotiana tabacum HOM05D007874 ORTHO05D009614 1.7e-10 70.1 143 41.3
Peaxi162Scf00159g00054 Petunia axillaris HOM05D007874 ORTHO05D009614 2.2e-10 69.7 109 42.2
Rhsim09G0067000 Rhododendron simsii HOM05D007874 ORTHO05D009614 2.2e-10 69.7 147 37.4
Cc11_g08720 Coffea canephora HOM05D007874 ORTHO05D009614 2.8e-10 69.3 147 38.8
SGA_v2.0_scaffold39G15167 Striga asiatica HOM05D007874 ORTHO05D009614 4.8e-10 68.6 114 39.5
Sed0007191 Sechium edule HOM05D007874 ORTHO05D009614 6.3e-10 68.2 150 41.3
Atru.chr11.536 Acer truncatum HOM05D007874 ORTHO05D009614 8.2e-10 67.8 104 49.0
TAR630G0003 Trochodendron aralioides HOM05D032524 ORTHO05D009614 4.1e-09 65.5 139 38.1
RcHm_v2.0_Chr4g0441281 Rosa chinensis HOM05D020194 ORTHO05D009614 5.3e-09 65.1 145 36.6
AT1G23050 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 6.9e-09 64.7 160 38.1
Glyma.07G216900 Glycine max HOM05D017162 ORTHO05D009614 6.9e-09 64.7 144 38.9
Peaxi162Scf00137g00121 Petunia axillaris HOM05D007874 ORTHO05D009614 1.2e-08 63.9 126 38.1
THA.LOC104809191 Tarenaya hassleriana HOM05D007874 ORTHO05D009614 1.2e-08 63.9 148 33.1
MELO3C005324.2 Cucumis melo HOM05D030674 ORTHO05D009614 1.5e-08 63.5 100 43.0
Eucgr.G02190 Eucalyptus grandis HOM05D007874 ORTHO05D009614 2.0e-08 63.2 121 42.1
Prupe.1G324600 Prunus persica HOM05D007874 ORTHO05D009614 2.0e-08 63.2 146 39.7
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 4.5e-08 62.0 143 36.4
TAR622G1026 Trochodendron aralioides HOM05D032524 ORTHO05D009614 5.9e-08 61.6 122 39.3
Nitab4.5_0000742g0160 Nicotiana tabacum HOM05D007874 ORTHO05D009614 7.7e-08 61.2 148 38.5
Eucgr.B02901 Eucalyptus grandis HOM05D007874 ORTHO05D009614 2.2e-07 59.7 148 37.2
TWI75G1882 Tripterygium wilfordii HOM05D007874 ORTHO05D009614 2.2e-07 59.7 108 42.6
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 3.8e-07 58.9 150 32.7
DCAR_026776 Daucus carota HOM05D007874 ORTHO05D009614 6.5e-07 58.2 151 33.8
SalBow8G5073 Salvia bowleyana HOM05D007874 ORTHO05D009614 6.5e-07 58.2 120 45.0
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 8.5e-07 57.8 119 36.1
CsaV3_5G028610 Cucumis sativus L. HOM05D030674 ORTHO05D009614 8.5e-07 57.8 79 48.1
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 1.1e-06 57.4 152 32.2
ClCG01G006070 Citrullus lanatus HOM05D030674 ORTHO05D009614 1.1e-06 57.4 101 45.5
Medtr4g084950 Medicago truncatula HOM05D017162 ORTHO05D009614 1.4e-06 57.0 83 45.8
Sp5g26130 Schrenkiella parvula HOM05D007874 ORTHO05D009614 1.9e-06 56.6 158 31.6
Ah.10g037960 Amaranthus hybridus HOM05D043951 ORTHO05D038233 9.4e-06 54.3 153 30.1
BcaC06g35013 Brassica carinata HOM05D039980 ORTHO05D032147 9.4e-06 54.3 82 50.0
C07p20680 Brassica napus HOM05D039980 ORTHO05D032147 9.4e-06 54.3 82 50.0
BolC7t42602H Brassica oleracea HOM05D039980 ORTHO05D032147 9.4e-06 54.3 82 50.0


User provided reference genes

Program Settings