Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p001040 Quercus lobata HOM05D005816 ORTHO05D006915 1.7e-58 229.2 117 100.0
Ciclev10033717m.g Citrus clementina HOM05D005816 ORTHO05D006915 9.8e-27 123.6 124 58.1
Lalb_Chr21g0313371 Lupinus albus HOM05D005816 ORTHO05D006915 1.4e-25 119.8 117 57.3
Duzib251G0462 Durio zibethinus HOM05D005816 ORTHO05D006915 4.6e-24 114.8 117 58.1
Atru.chr11.1371 Acer truncatum HOM05D005816 ORTHO05D006915 1.0e-23 113.6 127 59.1
Lalb_Chr10g0099661 Lupinus albus HOM05D005816 ORTHO05D006915 1.7e-23 112.8 118 55.1
Thecc.02G362100 Theobroma cacao HOM05D005816 ORTHO05D006915 1.7e-23 112.8 118 57.6
Glyma.20G185400 Glycine max HOM05D005816 ORTHO05D006915 5.0e-23 111.3 117 53.8
Glyma.10G205100 Glycine max HOM05D005816 ORTHO05D006915 6.6e-23 110.9 118 55.9
Phvul.007G101800 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 6.6e-23 110.9 117 53.8
CiPaw.16G002600 Carya illinoinensis HOM05D005816 ORTHO05D006915 1.1e-22 110.2 121 57.0
Potri.010G130400 Populus trichocarpa HOM05D005816 ORTHO05D006915 3.3e-22 108.6 120 52.5
MELO3C005357.2 Cucumis melo HOM05D005816 ORTHO05D006915 9.5e-22 107.1 120 55.8
Duzib248G0754 Durio zibethinus HOM05D005816 ORTHO05D006915 3.6e-21 105.1 118 55.1
COL.COLO4_07860 Corchorus olitorius HOM05D005816 ORTHO05D006915 8.0e-21 104.0 119 53.8
CiPaw.15G002700 Carya illinoinensis HOM05D005816 ORTHO05D006915 1.8e-20 102.8 128 54.7
TPR.G9813 Trifolium pratense HOM05D005816 ORTHO05D006915 1.8e-20 102.8 117 50.4
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla HOM05D005816 ORTHO05D006915 2.3e-20 102.4 118 50.8
Manes.14G096700 Manihot esculenta HOM05D005816 ORTHO05D006915 4.0e-20 101.7 120 55.0
TAR629G1032 Trochodendron aralioides HOM05D005816 ORTHO05D006915 4.0e-20 101.7 121 52.9
Medtr1g093800 Medicago truncatula HOM05D005816 ORTHO05D006915 5.2e-20 101.3 117 52.1
Sabra08G0087500 Salix brachista HOM05D005816 ORTHO05D006915 8.9e-20 100.5 124 50.0
Potri.008G115600 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.5e-19 99.8 118 55.1
VMungo0720G2795 Vigna mungo HOM05D005816 ORTHO05D006915 2.6e-19 99.0 118 52.5
Sed0000064 Sechium edule HOM05D005816 ORTHO05D006915 7.5e-19 97.4 118 52.5
Manes.06G073000 Manihot esculenta HOM05D005816 ORTHO05D006915 9.8e-19 97.1 121 48.8
Carub.0002s1536 Capsella rubella HOM05D005816 ORTHO05D006915 1.3e-18 96.7 124 45.2
PGR119G1376 Punica granatum HOM05D005816 ORTHO05D006915 1.7e-18 96.3 122 51.6
ClCG01G005730 Citrullus lanatus HOM05D005816 ORTHO05D006915 1.1e-17 93.6 108 50.9
AL2G27750 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 1.4e-17 93.2 122 47.5
Aqoxy3G00384 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 3.2e-17 92.0 118 46.6
Thhalv10019343m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 3.2e-17 92.0 120 47.5
Nn3g17700 Nelumbo nucifera HOM05D005816 ORTHO05D006915 4.1e-17 91.7 122 45.1
Prupe.1G304500 Prunus persica HOM05D005816 ORTHO05D006915 7.0e-17 90.9 136 47.1
CARHR061620 Cardamine hirsuta HOM05D005816 ORTHO05D006915 2.7e-16 89.0 117 46.2
Gohir.A13G071300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 2.7e-16 89.0 125 50.4
HanXRQChr16g0528861 Helianthus annuus HOM05D005816 ORTHO05D006915 2.7e-16 89.0 117 46.2
SalBow8G0077 Salvia bowleyana HOM05D005816 ORTHO05D006915 2.7e-16 89.0 123 45.5
Lsat_1_v5_gn_4_19200 Lactuca sativa HOM05D005816 ORTHO05D006915 3.5e-16 88.6 117 46.2
Gorai.013G079400 Gossypium raimondii HOM05D005816 ORTHO05D006915 4.6e-16 88.2 125 51.2
MD06G1210600 Malus domestica HOM05D005816 ORTHO05D006915 4.6e-16 88.2 120 48.3
Prupe.5G216700 Prunus persica HOM05D005816 ORTHO05D006915 1.0e-15 87.0 127 45.7
Gohir.D13G069300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.3e-15 86.7 125 48.8
AT1G68795 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 1.7e-15 86.3 118 46.6
BcaC08g46328 Brassica carinata HOM05D005816 ORTHO05D006915 3.0e-15 85.5 121 43.8
BolC6t39316H Brassica oleracea HOM05D005816 ORTHO05D006915 3.0e-15 85.5 121 43.8
COL.COLO4_22708 Corchorus olitorius HOM05D005816 ORTHO05D006915 8.6e-15 84.0 111 47.7
FAN17G1568 Fragaria x ananassa HOM05D005816 ORTHO05D006915 8.6e-15 84.0 111 47.7
HanXRQChr05g0149681 Helianthus annuus HOM05D005816 ORTHO05D006915 1.9e-14 82.8 116 44.8
Duzib205G0672 Durio zibethinus HOM05D005816 ORTHO05D006915 3.3e-14 82.0 120 45.8
Lalb_Chr07g0178581 Lupinus albus HOM05D005816 ORTHO05D006915 5.6e-14 81.3 121 44.6
FvH4_4g28190 Fragaria vesca HOM05D005816 ORTHO05D006915 7.3e-14 80.9 117 47.0
FAN12G1213 Fragaria x ananassa HOM05D005816 ORTHO05D006915 7.3e-14 80.9 117 47.0
TPR.G26768 Trifolium pratense HOM05D005816 ORTHO05D006915 7.3e-14 80.9 121 45.5
BcaB05g24412 Brassica carinata HOM05D005816 ORTHO05D006915 1.2e-13 80.1 122 43.4
FAN07G2890 Fragaria x ananassa HOM05D005816 ORTHO05D006915 1.2e-13 80.1 115 46.1
MD14G1221300 Malus domestica HOM05D005816 ORTHO05D006915 1.2e-13 80.1 118 47.5
Lj5g0018872 Lotus japonicus HOM05D005816 ORTHO05D006915 4.7e-13 78.2 108 51.9
Atru.chr9.746 Acer truncatum HOM05D005816 ORTHO05D006915 6.2e-13 77.8 74 56.8
BcaB03g15849 Brassica carinata HOM05D005816 ORTHO05D006915 6.2e-13 77.8 124 44.4
Gohir.D07G042900 Gossypium hirsutum HOM05D005816 ORTHO05D006915 6.2e-13 77.8 122 45.9
Gorai.001G045900 Gossypium raimondii HOM05D005816 ORTHO05D006915 6.2e-13 77.8 122 45.9
RcHm_v2.0_Chr4g0435951 Rosa chinensis HOM05D005816 ORTHO05D006915 8.1e-13 77.4 117 47.0
CSS0007623 Camellia sinensis var. sinensis HOM05D005816 ORTHO05D006915 1.4e-12 76.6 118 43.2
Oeu044626.1 Olea europaea HOM05D005816 ORTHO05D006915 2.3e-12 75.9 119 42.0
Phvul.003G177600 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 2.3e-12 75.9 117 40.2
CiPaw.16G083700 Carya illinoinensis HOM05D005816 ORTHO05D006915 4.0e-12 75.1 117 43.6
Gohir.A07G038800 Gossypium hirsutum HOM05D005816 ORTHO05D006915 4.0e-12 75.1 122 44.3
Manes.05G118800 Manihot esculenta HOM05D005816 ORTHO05D006915 6.8e-12 74.3 117 42.7
Oeu024099.1 Olea europaea HOM05D005816 ORTHO05D006915 6.8e-12 74.3 119 42.9
Thecc.03G027700 Theobroma cacao HOM05D005816 ORTHO05D006915 6.8e-12 74.3 122 43.4
Aqoxy3G03898 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 1.2e-11 73.6 117 42.7
Oeu041876.1 Olea europaea HOM05D005816 ORTHO05D006915 1.5e-11 73.2 120 43.3
Nn4g23710 Nelumbo nucifera HOM05D005816 ORTHO05D006915 2.0e-11 72.8 126 41.3
Cc11_g10680 Coffea canephora HOM05D005816 ORTHO05D006915 2.6e-11 72.4 113 45.1
Gorai.007G007600 Gossypium raimondii HOM05D005816 ORTHO05D006915 2.6e-11 72.4 120 43.3
Migut.L01100 Erythranthe guttata HOM05D005816 ORTHO05D006915 3.4e-11 72.0 117 41.0
Sp5g23900 Schrenkiella parvula HOM05D005816 ORTHO05D006915 3.4e-11 72.0 122 41.8
Eucgr.G02356 Eucalyptus grandis HOM05D005816 ORTHO05D006915 5.8e-11 71.2 136 40.4
Gohir.D11G006300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 5.8e-11 71.2 120 43.3
Solyc05g009915.1 Solanum lycopersicum HOM05D005816 ORTHO05D006915 7.5e-11 70.9 122 44.3
BcaC03g14990 Brassica carinata HOM05D005816 ORTHO05D006915 9.9e-11 70.5 122 40.2
MBI16_g06255_MAGBIO Magnolia biondii HOM05D005816 ORTHO05D006915 1.3e-10 70.1 118 44.9
Medtr8g076990 Medicago truncatula HOM05D005816 ORTHO05D006915 1.7e-10 69.7 69 53.6
Aa31sc79G90 Aethionema arabicum HOM05D005816 ORTHO05D006915 2.2e-10 69.3 117 42.7
PGSC0003DMG400000830 Solanum tuberosum HOM05D005816 ORTHO05D006915 2.2e-10 69.3 119 44.5
Migut.E00293 Erythranthe guttata HOM05D005816 ORTHO05D006915 6.4e-10 67.8 87 46.0
Gohir.A11G007200 Gossypium hirsutum HOM05D005816 ORTHO05D006915 8.3e-10 67.4 122 43.4
QL10p023002 Quercus lobata HOM05D005816 ORTHO05D006915 8.3e-10 67.4 122 40.2
THA.LOC104821965 Tarenaya hassleriana HOM05D005816 ORTHO05D006915 8.3e-10 67.4 118 43.2
Dinv36900 Davidia involucrata HOM05D005816 ORTHO05D006915 1.1e-09 67.0 92 43.5
AL2G33800 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 1.9e-09 66.2 116 44.8
FvH4_5g12751 Fragaria vesca HOM05D005816 ORTHO05D006915 1.9e-09 66.2 118 39.8
C06p48080 Brassica napus HOM05D005816 ORTHO05D006915 2.4e-09 65.9 114 40.4
Glyma.17G121800 Glycine max HOM05D005816 ORTHO05D006915 3.2e-09 65.5 120 40.0
Lsat_1_v5_gn_3_58221 Lactuca sativa HOM05D005816 ORTHO05D006915 3.2e-09 65.5 118 38.1
PGSC0003DMG400005703 Solanum tuberosum HOM05D005816 ORTHO05D006915 3.2e-09 65.5 63 50.8
A07p39820 Brassica napus HOM05D005816 ORTHO05D006915 4.1e-09 65.1 114 40.4
BraA07t31528Z Brassica rapa HOM05D005816 ORTHO05D006915 4.1e-09 65.1 114 40.4
Gohir.D02G116175 Gossypium hirsutum HOM05D005816 ORTHO05D006915 4.1e-09 65.1 107 43.9
Sopen03g038660 Solanum pennellii HOM05D005816 ORTHO05D006915 4.1e-09 65.1 63 50.8
CARHR067080 Cardamine hirsuta HOM05D005816 ORTHO05D006915 5.4e-09 64.7 116 44.8
Thhalv10019753m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 5.4e-09 64.7 114 39.5
FAN18G0325 Fragaria x ananassa HOM05D005816 ORTHO05D006915 5.4e-09 64.7 118 39.8
HanXRQChr16g0502081 Helianthus annuus HOM05D005816 ORTHO05D006915 5.4e-09 64.7 76 47.4
Psat4g043720 Pisum sativum HOM05D005816 ORTHO05D006915 5.4e-09 64.7 119 37.0
Potri.012G059600 Populus trichocarpa HOM05D005816 ORTHO05D006915 5.4e-09 64.7 120 41.7
AT1G73965 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 7.1e-09 64.3 116 41.4
CiPaw.15G126000 Carya illinoinensis HOM05D005816 ORTHO05D006915 7.1e-09 64.3 123 43.1
Glyma.05G013600 Glycine max HOM05D005816 ORTHO05D006915 9.2e-09 63.9 126 37.3
Sp5g29165 Schrenkiella parvula HOM05D005816 ORTHO05D006915 9.2e-09 63.9 114 38.6
Carub.0002s2074 Capsella rubella HOM05D005816 ORTHO05D006915 1.6e-08 63.2 119 38.7
Cpa.g.sc13.61 Carica papaya HOM05D005816 ORTHO05D006915 2.1e-08 62.8 63 52.4
Sopen05g005720 Solanum pennellii HOM05D005816 ORTHO05D006915 2.1e-08 62.8 64 54.7
Lalb_Chr13g0302361 Lupinus albus HOM05D005816 ORTHO05D006915 2.7e-08 62.4 117 40.2
Aa31LG4G4260 Aethionema arabicum HOM05D005816 ORTHO05D006915 1.0e-07 60.5 56 57.1
BolC6t39843H Brassica oleracea HOM05D005816 ORTHO05D006915 1.0e-07 60.5 114 39.5
MELO3C017284.2 Cucumis melo HOM05D005816 ORTHO05D006915 1.0e-07 60.5 113 39.8
Gohir.A03G097050 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.0e-07 60.5 108 43.5
Lsat_1_v5_gn_4_112260 Lactuca sativa HOM05D005816 ORTHO05D006915 1.7e-07 59.7 75 52.0
BcaC08g46825 Brassica carinata HOM05D005816 ORTHO05D006915 5.1e-07 58.2 114 36.8
Sc11g0003040 Simmondsia chinensis HOM05D005816 ORTHO05D006915 5.1e-07 58.2 120 39.2
PGR044G2006 Punica granatum HOM05D005816 ORTHO05D006915 6.6e-07 57.8 117 33.3
VMungo1215G1388 Vigna mungo HOM05D005816 ORTHO05D006915 6.6e-07 57.8 120 41.7
Manes.01G021100 Manihot esculenta HOM05D005816 ORTHO05D006915 1.5e-06 56.6 64 43.8
ATR0681G007 Amborella trichopoda HOM05D005816 ORTHO05D006915 2.5e-06 55.8 36 69.4
Eucgr.B00694 Eucalyptus grandis HOM05D005816 ORTHO05D006915 2.5e-06 55.8 63 47.6
Sed0012991 Sechium edule HOM05D005816 ORTHO05D006915 5.6e-06 54.7 64 45.3


User provided reference genes

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