Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 1.2e-250 869.4 443 100.0
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 4.2e-203 711.4 448 80.8
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 4.2e-203 711.4 448 80.8
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 9.0e-190 667.2 430 79.5
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.3e-180 636.7 448 74.3
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 3.2e-179 632.1 405 75.3
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 5.7e-176 621.3 449 69.9
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.5e-173 613.2 406 74.1
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 7.7e-173 610.9 433 71.1
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.7e-172 609.8 431 71.7
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 2.9e-172 609.0 428 70.6
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 5.0e-172 608.2 401 74.1
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.7e-170 601.7 440 68.9
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 1.0e-169 600.5 424 71.0
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 8.8e-169 597.4 453 68.2
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 7.4e-168 594.3 412 71.4
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 1.3e-167 593.6 411 71.0
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 2.8e-167 592.4 412 71.4
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 3.7e-167 592.0 455 67.3
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.1e-166 588.6 406 71.9
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 4.1e-166 588.6 456 66.7
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 2.2e-164 582.8 412 69.4
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 1.1e-163 580.5 425 67.8
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 9.4e-163 577.4 405 70.4
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.2e-162 577.0 417 69.5
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.6e-162 576.6 425 68.0
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 1.0e-161 573.9 426 67.1
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 1.4e-161 573.5 404 70.5
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.1e-160 570.5 420 68.8
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 2.6e-160 569.3 424 66.0
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 3.3e-160 568.9 442 66.5
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 1.3e-159 567.0 461 64.0
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 2.2e-159 566.2 440 66.6
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.8e-159 565.1 406 70.2
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 8.2e-159 564.3 404 68.6
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 7.0e-158 561.2 412 68.0
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 9.1e-158 560.8 419 68.0
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.3e-156 557.0 413 68.8
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 2.2e-156 556.2 412 67.2
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 3.8e-156 555.4 456 62.9
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 6.5e-156 554.7 407 68.3
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 8.5e-156 554.3 418 67.9
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 1.9e-155 553.1 418 67.9
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 1.9e-155 553.1 441 65.5
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 3.0e-153 545.8 444 63.1
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 5.2e-153 545.0 447 62.9
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 5.2e-153 545.0 428 64.7
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 5.7e-152 541.6 409 65.8
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 7.5e-152 541.2 426 64.3
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 4.8e-151 538.5 448 62.5
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 4.8e-151 538.5 400 68.5
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 2.4e-150 536.2 401 66.1
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 5.3e-150 535.0 449 61.2
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 2.7e-149 532.7 379 69.7
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 5.9e-149 531.6 446 59.6
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 1.3e-148 530.4 399 67.2
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 2.9e-148 529.3 435 61.6
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 5.0e-148 528.5 432 61.8
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 5.0e-148 528.5 435 61.6
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 6.5e-148 528.1 433 61.2
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 1.9e-147 526.6 435 60.9
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 2.5e-147 526.2 438 62.6
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 7.2e-147 524.6 413 62.5
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 1.0e-145 520.8 406 64.8
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 3.0e-145 519.2 374 68.2
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 8.8e-145 517.7 375 67.7
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 4.4e-144 515.4 361 70.6
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 9.8e-144 514.2 436 60.3
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 1.3e-143 513.8 461 58.8
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 2.2e-143 513.1 434 59.7
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 6.3e-143 511.5 453 59.4
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 1.1e-142 510.8 453 59.2
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 5.4e-142 508.4 493 56.6
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 4.5e-141 505.4 411 63.0
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 1.0e-140 504.2 430 60.9
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 1.3e-140 503.8 469 58.0
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 2.9e-140 502.7 430 60.5
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 2.8e-138 496.1 330 74.8
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 1.4e-137 493.8 330 73.3
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 2.5e-131 473.0 409 60.1
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 8.9e-129 464.5 457 54.9
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 9.8e-128 461.1 416 57.9
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 3.7e-127 459.1 399 60.4
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 1.1e-123 447.6 355 60.6
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 1.5e-123 447.2 331 66.2
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 1.5e-120 437.2 329 66.6
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 2.3e-116 423.3 398 54.5
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 1.5e-115 420.6 401 55.1
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 3.3e-115 419.5 294 71.1
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 1.6e-114 417.2 294 70.4
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 3.1e-113 412.9 378 57.4
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 4.6e-109 399.1 293 64.5
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 1.7e-103 380.6 445 47.2
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 4.6e-101 372.5 279 67.4
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 6.0e-101 372.1 265 70.6
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.1e-99 367.9 364 51.9
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 2.1e-98 363.6 260 70.0
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.5e-96 357.5 423 45.6
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 7.8e-93 345.1 426 43.7
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 3.8e-87 326.2 331 50.5
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 3.0e-84 316.6 225 70.2
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 7.4e-83 312.0 408 41.2
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.8e-52 211.1 248 46.8
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.3e-52 210.7 154 66.2
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.0e-52 210.3 145 71.7
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 2.2e-50 204.1 163 61.3
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 2.3e-44 184.1 169 57.4
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 6.7e-44 182.6 146 59.6
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 5.7e-43 179.5 147 63.9
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.0e-35 154.5 110 70.9
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.2e-30 136.0 96 66.7
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 2.3e-28 131.0 109 58.7
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.3e-26 125.2 123 57.7
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.2e-26 124.4 119 59.7
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 4.1e-25 120.2 91 61.5
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.3e-07 62.0 48 62.5
CSS0033674 Camellia sinensis var. sinensis HOM05D050661 ORTHO05D112259 8.6e-07 59.3 33 75.8
TAR626G1040 Trochodendron aralioides HOM05D006903 ORTHO05D416170 5.6e-06 56.6 86 39.5


User provided reference genes

Program Settings