Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p000876 Quercus lobata HOM05D008579 ORTHO05D010245 4.0e-50 201.1 96 100.0
Prupe.1G303500 Prunus persica HOM05D008579 ORTHO05D010245 2.5e-20 102.1 99 51.5
Haze_17414 Corylus avellana HOM05D008579 ORTHO05D010245 5.2e-18 94.4 98 56.1
Gohir.A12G172600 Gossypium hirsutum HOM05D008579 ORTHO05D010245 9.9e-17 90.1 95 46.3
Gohir.D12G175100 Gossypium hirsutum HOM05D008579 ORTHO05D010245 9.9e-17 90.1 95 46.3
Thecc.02G363200 Theobroma cacao HOM05D008579 ORTHO05D010245 2.2e-16 89.0 102 47.1
RcHm_v2.0_Chr4g0436131 Rosa chinensis HOM05D008579 ORTHO05D010245 2.4e-15 85.5 73 57.5
Gorai.008G187700 Gossypium raimondii HOM05D008579 ORTHO05D010245 3.2e-15 85.1 98 44.9
Ciclev10033191m.g Citrus clementina HOM05D008579 ORTHO05D010245 1.2e-14 83.2 96 46.9
Hma1.2p1_0605F.1_g187880 Hydrangea macrophylla HOM05D008579 ORTHO05D010245 1.0e-13 80.1 101 45.5
Potri.008G114600 Populus trichocarpa HOM05D008579 ORTHO05D010245 1.0e-13 80.1 77 46.8
Nn4g23678 Nelumbo nucifera HOM05D008579 ORTHO05D010245 1.5e-12 76.3 76 48.7
Potri.010G131500 Populus trichocarpa HOM05D008579 ORTHO05D010245 3.3e-12 75.1 73 43.8
TPR.G9816 Trifolium pratense HOM05D008579 ORTHO05D010245 7.3e-12 73.9 97 47.4
ClCG05G023140 Citrullus lanatus HOM05D008579 ORTHO05D010245 1.6e-11 72.8 80 48.8
Phvul.007G101400 Phaseolus vulgaris HOM05D008579 ORTHO05D010245 8.1e-11 70.5 91 45.1
Lj3g0023630 Lotus japonicus HOM05D008579 ORTHO05D010245 1.4e-10 69.7 94 41.5
Lj5g0012204 Lotus japonicus HOM05D008579 ORTHO05D010245 1.4e-10 69.7 94 41.5
Medtr1g093920 Medicago truncatula HOM05D008579 ORTHO05D010245 1.4e-10 69.7 94 46.8
Glyma.02G131300 Glycine max HOM05D008579 ORTHO05D010245 1.8e-10 69.3 95 43.2
COL.COLO4_07854 Corchorus olitorius HOM05D008579 ORTHO05D010245 2.4e-10 68.9 46 60.9
Glyma.20G185000 Glycine max HOM05D008579 ORTHO05D010245 3.1e-10 68.6 94 40.4
Glyma.01G090400 Glycine max HOM05D008579 ORTHO05D010245 6.8e-10 67.4 93 41.9
TPR.G2700 Trifolium pratense HOM05D008579 ORTHO05D010245 1.5e-09 66.2 92 44.6
Manes.06G074200 Manihot esculenta HOM05D008579 ORTHO05D010245 2.0e-09 65.9 90 37.8
Lalb_Chr17g0341821 Lupinus albus HOM05D008579 ORTHO05D010245 4.4e-09 64.7 96 39.6
Sed0026635 Sechium edule HOM05D008579 ORTHO05D010245 5.8e-09 64.3 96 44.8
Glyma.10G205400 Glycine max HOM05D008579 ORTHO05D010245 7.6e-09 63.9 94 40.4
Lalb_Chr02g0151861 Lupinus albus HOM05D008579 ORTHO05D010245 9.9e-09 63.5 93 41.9
Nn3g17676 Nelumbo nucifera HOM05D008579 ORTHO05D010245 1.3e-08 63.2 72 45.8
Sed0027044 Sechium edule HOM05D008579 ORTHO05D010245 1.3e-08 63.2 75 44.0
CsaV3_5G033860 Cucumis sativus L. HOM05D008579 ORTHO05D010245 4.9e-08 61.2 88 40.9
Lsat_1_v5_gn_4_17220 Lactuca sativa HOM05D008579 ORTHO05D010245 1.4e-07 59.7 81 42.0
Sabra08G0086800 Salix brachista HOM05D008579 ORTHO05D010245 1.4e-07 59.7 64 42.2
CiPaw.15G002000 Carya illinoinensis HOM05D008579 ORTHO05D010245 4.2e-07 58.2 70 47.1
MELO3C012204.2 Cucumis melo HOM05D008579 ORTHO05D010245 4.2e-07 58.2 69 47.8
Eucgr.G02368 Eucalyptus grandis HOM05D008579 ORTHO05D010245 4.2e-07 58.2 78 39.7
Lj2g0027990 Lotus japonicus HOM05D008579 ORTHO05D010245 4.2e-07 58.2 94 40.4
Peaxi162Scf00367g00073 Petunia axillaris HOM05D022312 ORTHO05D014564 7.1e-07 57.4 90 36.7
Manes.14G096100 Manihot esculenta HOM05D008579 ORTHO05D010245 1.2e-06 56.6 91 37.4
CSS0039536 Camellia sinensis var. sinensis HOM05D008579 ORTHO05D010245 4.6e-06 54.7 72 41.7
Phvul.003G025100 Phaseolus vulgaris HOM05D008579 ORTHO05D010245 4.6e-06 54.7 79 39.2


User provided reference genes

Program Settings