Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 9.6e-303 1042.7 536 100.0
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 3.8e-235 818.1 532 79.9
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 4.6e-196 688.3 532 69.9
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 3.6e-193 678.7 529 66.2
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 3.4e-191 672.2 495 67.5
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 3.2e-189 665.6 464 72.8
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 9.2e-189 664.1 444 75.5
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 1.3e-187 660.2 460 72.0
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 1.9e-186 656.4 462 70.8
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 5.6e-186 654.8 454 71.4
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 2.4e-184 649.4 495 65.7
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 1.2e-183 647.1 456 69.5
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 2.0e-183 646.4 495 67.9
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 1.8e-176 623.2 493 62.7
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 2.6e-175 619.4 481 66.7
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 3.8e-174 615.5 407 74.9
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 3.2e-173 612.5 461 65.3
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 3.3e-170 602.4 467 63.6
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 4.3e-170 602.1 534 59.4
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 3.6e-169 599.0 484 62.6
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 8.1e-169 597.8 467 63.4
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 1.1e-168 597.4 454 63.7
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.4e-168 597.0 467 63.8
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 2.4e-168 596.3 476 63.2
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 5.3e-168 595.1 470 62.8
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.4e-166 587.8 505 60.0
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 5.5e-165 585.1 471 61.4
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 1.0e-163 580.9 475 62.3
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 4.6e-140 502.3 495 54.7
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 3.2e-133 479.6 311 74.9
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 5.7e-114 415.6 482 46.5
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 2.3e-110 403.7 460 47.0
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 1.4e-107 394.4 503 44.1
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 7.8e-103 378.6 281 66.5
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 2.8e-100 370.2 393 51.4
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 8.0e-100 368.6 270 67.0
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 5.7e-98 362.5 445 45.2
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.2e-66 258.5 319 51.4
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 2.6e-66 257.3 198 61.6
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 4.9e-65 253.1 224 59.8
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.2e-64 250.4 236 57.2
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 7.1e-64 249.2 245 50.6
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 7.1e-64 249.2 245 50.6
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 7.3e-61 239.2 180 68.9
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 7.3e-61 239.2 499 34.3
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.9e-57 227.3 187 62.0
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.7e-54 216.1 182 59.9
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.7e-54 215.7 182 60.4
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.5e-53 214.9 182 60.4
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 4.3e-53 213.4 264 49.6
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 8.1e-52 209.1 259 49.8
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.1e-52 209.1 174 60.9
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.4e-48 197.6 167 59.9
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.2e-48 196.8 179 57.0
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 3.4e-42 177.2 240 43.3
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.8e-41 173.7 181 51.4
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 4.2e-40 170.2 158 55.7
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.1e-40 169.5 142 59.2
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.7e-39 167.5 142 59.2
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.1e-35 155.6 121 61.2
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 9.1e-27 125.9 355 30.7
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.0e-26 124.8 123 54.5
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 7.7e-26 122.9 307 31.9
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 1.0e-25 122.5 113 55.8
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.4e-22 112.1 128 46.9
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 5.1e-22 110.2 71 66.2
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 3.3e-21 107.5 194 37.1
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 7.4e-21 106.3 172 40.1
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 5.3e-19 100.1 75 65.3
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 5.2e-14 83.6 120 43.3
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 3.3e-13 80.9 139 38.8
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 4.8e-12 77.0 140 39.3
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 7.0e-11 73.2 102 38.2
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 3.5e-10 70.9 56 60.7
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 8.5e-09 66.2 393 25.7
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 2.1e-07 61.6 79 39.2
SMO147G0132 Selaginella moellendorffii HOM05D005554 ORTHO05D007823 2.7e-07 61.2 364 22.5
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 3.6e-07 60.8 112 33.0
unitig_26.g9706 Utricularia gibba HOM05D005554 ORTHO05D007823 5.2e-06 57.0 108 32.4
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 5.2e-06 57.0 356 23.0
Gohir.A03G016800 Gossypium hirsutum HOM05D005554 ORTHO05D007823 6.7e-06 56.6 223 25.6
Peaxi162Scf00119g01015 Petunia axillaris HOM05D005554 ORTHO05D007823 6.7e-06 56.6 222 23.4


User provided reference genes

Program Settings