Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p000564 Quercus lobata HOM05D007185 ORTHO05D009016 2.7e-67 258.5 126 100.0
QL09p032521 Quercus lobata HOM05D007185 ORTHO05D009016 2.1e-27 125.9 67 92.5
COL.COLO4_33132 Corchorus olitorius HOM05D007185 ORTHO05D009016 5.1e-21 104.8 66 74.2
Thecc.02G153300 Theobroma cacao HOM05D007185 ORTHO05D009016 8.7e-21 104.0 66 80.3
Ciclev10033499m.g Citrus clementina HOM05D007185 ORTHO05D009016 1.5e-20 103.2 66 77.3
Potri.007G000801 Populus trichocarpa HOM05D007185 ORTHO05D009016 6.2e-19 97.8 66 77.3
Gohir.D02G190750 Gossypium hirsutum HOM05D007185 ORTHO05D009016 6.9e-18 94.4 66 69.7
Gorai.005G213500 Gossypium raimondii HOM05D007185 ORTHO05D009016 2.0e-17 92.8 66 68.2
Gohir.A03G167650 Gossypium hirsutum HOM05D007185 ORTHO05D009016 4.4e-17 91.7 66 68.2
Manes.04G161900 Manihot esculenta HOM05D007185 ORTHO05D009016 9.9e-17 90.5 60 71.7
Gorai.008G147600 Gossypium raimondii HOM05D007185 ORTHO05D009016 1.7e-16 89.7 52 86.5
Gohir.A12G132900 Gossypium hirsutum HOM05D007185 ORTHO05D009016 2.9e-16 89.0 52 84.6
Gohir.D12G136400 Gossypium hirsutum HOM05D007185 ORTHO05D009016 4.9e-16 88.2 52 84.6
Nn3g18559 Nelumbo nucifera HOM05D007185 ORTHO05D009016 8.4e-16 87.4 59 71.2
Cpa.g.c35461 Carica papaya HOM05D007185 ORTHO05D009016 1.1e-15 87.0 64 65.6
DCAR_023469 Daucus carota HOM05D007185 ORTHO05D009016 4.6e-14 81.6 64 57.8
TAR629G0868 Trochodendron aralioides HOM05D007185 ORTHO05D009016 4.6e-14 81.6 66 62.1
Lalb_Chr21g0307091 Lupinus albus HOM05D007185 ORTHO05D009016 2.3e-13 79.3 64 57.8
Lalb_Chr02g0143761 Lupinus albus HOM05D007185 ORTHO05D009016 6.6e-13 77.8 60 55.0
Phvul.007G012800 Phaseolus vulgaris HOM05D007185 ORTHO05D009016 1.1e-12 77.0 77 54.5
Eucgr.J00338 Eucalyptus grandis HOM05D007185 ORTHO05D009016 1.5e-12 76.6 75 61.3
DCAR_026882 Daucus carota HOM05D007185 ORTHO05D009016 3.3e-12 75.5 64 50.0
TPR.G4098 Trifolium pratense HOM05D007185 ORTHO05D009016 1.2e-09 67.0 59 52.5
PGSC0003DMG400025313 Solanum tuberosum HOM05D007185 ORTHO05D009016 1.5e-09 66.6 64 51.6
Cpa.g.sc27.90 Carica papaya HOM05D007185 ORTHO05D009016 8.4e-08 60.8 47 63.8
Thecc.06G194500 Theobroma cacao HOM05D007185 ORTHO05D009016 2.4e-07 59.3 46 60.9
RcHm_v2.0_Chr5g0007481 Rosa chinensis HOM05D007185 ORTHO05D009016 4.2e-07 58.5 46 58.7
FvH4_6g14200 Fragaria vesca HOM05D007185 ORTHO05D009016 5.5e-07 58.2 46 56.5
FAN05G3455 Fragaria x ananassa HOM05D007185 ORTHO05D009016 5.5e-07 58.2 46 56.5
FAN09G3112 Fragaria x ananassa HOM05D007185 ORTHO05D009016 5.5e-07 58.2 46 56.5
FAN14G1513 Fragaria x ananassa HOM05D007185 ORTHO05D009016 5.5e-07 58.2 46 56.5
Hma1.2p1_0835F.1_g225880 Hydrangea macrophylla HOM05D007185 ORTHO05D009016 9.3e-07 57.4 45 62.2
SGA_v2.0_scaffold22G09753 Striga asiatica HOM05D007185 ORTHO05D009016 9.3e-07 57.4 55 49.1
FAN16G0756 Fragaria x ananassa HOM05D007185 ORTHO05D009016 1.2e-06 57.0 50 54.0
FAN25G2721 Fragaria x ananassa HOM05D007185 ORTHO05D009016 1.2e-06 57.0 50 54.0
Atru.chr10.1968 Acer truncatum HOM05D007185 ORTHO05D009016 1.6e-06 56.6 46 58.7
Psat1g206960 Pisum sativum HOM05D007185 ORTHO05D009016 2.1e-06 56.2 54 53.7
COL.COLO4_31534 Corchorus olitorius HOM05D007185 ORTHO05D009016 2.7e-06 55.8 46 58.7
Gohir.D05G166000 Gossypium hirsutum HOM05D007185 ORTHO05D009016 2.7e-06 55.8 46 56.5
Gorai.009G171200 Gossypium raimondii HOM05D007185 ORTHO05D009016 2.7e-06 55.8 46 56.5
CiPaw.09G053500 Carya illinoinensis HOM05D007185 ORTHO05D009016 4.6e-06 55.1 45 60.0
Ciclev10017305m.g Citrus clementina HOM05D007185 ORTHO05D009016 4.6e-06 55.1 51 56.9
FAN21G1120 Fragaria x ananassa HOM05D007185 ORTHO05D009016 4.6e-06 55.1 50 54.0
MBI18_g13206_MAGBIO Magnolia biondii HOM05D007185 ORTHO05D009016 4.6e-06 55.1 49 55.1
FvH4_3g04560 Fragaria vesca HOM05D007185 ORTHO05D009016 6.0e-06 54.7 50 52.0
FAN11G2592 Fragaria x ananassa HOM05D007185 ORTHO05D009016 6.0e-06 54.7 50 52.0
HanXRQChr09g0263951 Helianthus annuus HOM05D007185 ORTHO05D009016 6.0e-06 54.7 51 51.0
Sed0025622 Sechium edule HOM05D007185 ORTHO05D009016 6.0e-06 54.7 47 53.2
arahy.Tifrunner.gnm1.ann1.5HQW77 Arachis hypogaea HOM05D007185 ORTHO05D009016 7.9e-06 54.3 46 52.2
arahy.Tifrunner.gnm1.ann1.D3DKTB Arachis hypogaea HOM05D007185 ORTHO05D009016 7.9e-06 54.3 46 52.2


User provided reference genes

Program Settings