Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g238760 Pisum sativum HOM05D000855 ORTHO05D015734 2.7e-281 971.5 532 100.0
Psat7g238720 Pisum sativum HOM05D000855 ORTHO05D015734 4.8e-145 518.8 398 80.4
Psat1g092360 Pisum sativum HOM05D001093 ORTHO05D000743 2.0e-66 257.7 181 80.1
Psat2g110360 Pisum sativum HOM05D002628 ORTHO05D002785 6.6e-62 242.7 167 81.4
Psat6g140320 Pisum sativum HOM05D000855 ORTHO05D002321 2.6e-42 177.6 94 92.6
Psat2g053480 Pisum sativum HOM05D000855 ORTHO05D002321 1.3e-36 158.7 93 83.9
Psat6g130920 Pisum sativum HOM05D000855 ORTHO05D020975 3.1e-35 154.1 105 82.9
Ca_09783_v3 Cicer arietinum L. HOM05D000855 ORTHO05D002321 4.0e-35 153.7 121 65.3
TPR.G18567 Trifolium pratense HOM05D000855 ORTHO05D002321 1.3e-33 148.7 140 57.1
Psat2g053520 Pisum sativum HOM05D004426 ORTHO05D005417 1.5e-29 135.2 75 86.7
Medtr1g072780 Medicago truncatula HOM05D000855 ORTHO05D002321 7.4e-29 132.9 97 67.0
Lj5g0013876 Lotus japonicus HOM05D000855 ORTHO05D002321 7.6e-26 122.9 116 55.2
Psat1g105760 Pisum sativum HOM05D003876 ORTHO05D004560 9.9e-26 122.5 125 78.4
Psat7g035480 Pisum sativum HOM05D003876 ORTHO05D004560 2.2e-25 121.3 167 47.3
Phvul.007G134100 Phaseolus vulgaris HOM05D000855 ORTHO05D002321 3.2e-24 117.5 120 51.7
Glyma.20G198402 Glycine max HOM05D000855 ORTHO05D002321 9.3e-24 115.9 148 47.3
VMungo0720G2399 Vigna mungo HOM05D000855 ORTHO05D002321 2.7e-23 114.4 112 54.5
arahy.Tifrunner.gnm1.ann1.5RAP3T Arachis hypogaea HOM05D002303 ORTHO05D006504 5.6e-21 106.7 114 55.3
Lalb_Chr03g0036491 Lupinus albus HOM05D000855 ORTHO05D002321 9.6e-21 105.9 88 60.2
arahy.Tifrunner.gnm1.ann1.FDC534 Arachis hypogaea HOM05D002303 ORTHO05D006504 4.8e-20 103.6 90 62.2
VMungo0720G0251 Vigna mungo HOM05D000855 ORTHO05D002321 1.8e-19 101.7 121 47.1
Psat5g173160 Pisum sativum HOM05D003435 ORTHO05D020975 1.2e-18 99.0 91 65.9
Lalb_Chr03g0036481 Lupinus albus HOM05D000855 ORTHO05D002321 2.0e-18 98.2 88 56.8
Psat0s667g0160 Pisum sativum HOM05D001093 ORTHO05D000743 3.4e-18 97.4 141 49.6
Glyma.10G116800 Glycine max HOM05D000855 ORTHO05D002321 8.4e-17 92.8 75 60.0
Phvul.007G240300 Phaseolus vulgaris HOM05D000855 ORTHO05D002321 1.4e-16 92.0 77 55.8
Psat7g035440 Pisum sativum HOM05D000278 ORTHO05D002321 2.5e-16 91.3 80 63.8
Prupe.2G219200 Prunus persica HOM05D000855 ORTHO05D002321 7.1e-16 89.7 114 44.7
QL08p056900 Quercus lobata HOM05D000855 ORTHO05D002321 7.1e-16 89.7 101 49.5
Glyma.02G087500 Glycine max HOM05D000855 ORTHO05D002321 2.1e-15 88.2 107 47.7
TAR623G1395 Trochodendron aralioides HOM05D000855 ORTHO05D002321 2.1e-15 88.2 85 54.1
Psat5g173200 Pisum sativum HOM05D000518 ORTHO05D000737 1.0e-14 85.9 51 90.2
Medtr4g036445 Medicago truncatula HOM05D000855 ORTHO05D002321 1.3e-14 85.5 89 52.8
RcHm_v2.0_Chr1g0364181 Rosa chinensis HOM05D000855 ORTHO05D002321 1.3e-14 85.5 137 36.5
Dinv31342 Davidia involucrata HOM05D000855 ORTHO05D002321 1.8e-14 85.1 122 44.3
CiPaw.02G176700 Carya illinoinensis HOM05D000855 ORTHO05D002321 2.3e-14 84.7 105 45.7
Haze_16938 Corylus avellana HOM05D000855 ORTHO05D002321 2.3e-14 84.7 85 50.6
Cfa001590 Carpinus fangiana HOM05D000855 ORTHO05D002321 3.0e-14 84.3 85 54.1
Duzib114G0150 Durio zibethinus HOM05D000855 ORTHO05D002321 3.0e-14 84.3 123 43.1
Thecc.10G067400 Theobroma cacao HOM05D000855 ORTHO05D002321 3.0e-14 84.3 123 40.7
Medtr1g049120 Medicago truncatula HOM05D000855 ORTHO05D002321 1.1e-13 82.4 93 48.4
AUR62026103 Chenopodium quinoa HOM05D000855 ORTHO05D002321 1.9e-13 81.6 118 40.7
FAN01G0071 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.9e-13 81.6 136 35.3
FAN03G2424 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.9e-13 81.6 136 35.3
Lj6g0011965 Lotus japonicus HOM05D000855 ORTHO05D002321 1.9e-13 81.6 168 36.3
CsaV3_5G006280 Cucumis sativus L. HOM05D000855 ORTHO05D002321 2.5e-13 81.3 59 62.7
MELO3C011728.2 Cucumis melo HOM05D000855 ORTHO05D002321 3.3e-13 80.9 59 62.7
Ca_27423_v3 Cicer arietinum L. HOM05D000855 ORTHO05D002321 4.3e-13 80.5 88 50.0
ClCG02G013880 Citrullus lanatus HOM05D000855 ORTHO05D002321 4.3e-13 80.5 59 62.7
Nn2g12991 Nelumbo nucifera HOM05D000855 ORTHO05D002321 4.3e-13 80.5 85 50.6
FAN03G1459 Fragaria x ananassa HOM05D000855 ORTHO05D002321 5.7e-13 80.1 136 34.6
Sabra10G0167800 Salix brachista HOM05D000855 ORTHO05D002321 7.4e-13 79.7 79 51.9
CiPaw.02G176900 Carya illinoinensis HOM05D000855 ORTHO05D002321 9.6e-13 79.3 120 44.2
AUR62024512 Chenopodium quinoa HOM05D000855 ORTHO05D002321 9.6e-13 79.3 90 48.9
GSVIVG01016344001 Vitis vinifera HOM05D000855 ORTHO05D002321 9.6e-13 79.3 113 43.4
COL.COLO4_23754 Corchorus olitorius HOM05D000855 ORTHO05D002321 1.3e-12 79.0 74 54.1
FAN06G2522 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.3e-12 79.0 136 33.8
Sed0014953 Sechium edule HOM05D000855 ORTHO05D002321 1.3e-12 79.0 59 61.0
EL10Ac3g07139 Beta vulgaris HOM05D000855 ORTHO05D002321 1.6e-12 78.6 82 50.0
Dinv31338 Davidia involucrata HOM05D000855 ORTHO05D002321 1.6e-12 78.6 122 42.6
FAN10G3244 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.6e-12 78.6 136 33.8
CSS0010994 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D002321 2.1e-12 78.2 94 45.7
FvH4_7g20250 Fragaria vesca HOM05D000855 ORTHO05D002321 2.1e-12 78.2 136 33.8
Potri.008G044600 Populus trichocarpa HOM05D000855 ORTHO05D002321 2.1e-12 78.2 90 47.8
Thecc.02G022000 Theobroma cacao HOM05D000855 ORTHO05D002321 2.1e-12 78.2 116 41.4
Ciclev10030525m.g Citrus clementina HOM05D000855 ORTHO05D002321 3.7e-12 77.4 105 41.9
Lj2g0008242 Lotus japonicus HOM05D001093 ORTHO05D000743 3.7e-12 77.4 148 38.5
Atru.chr12.632 Acer truncatum HOM05D000855 ORTHO05D002321 4.8e-12 77.0 117 40.2
Eucgr.G02799 Eucalyptus grandis HOM05D000855 ORTHO05D002321 4.8e-12 77.0 98 42.9
TPR.G35697 Trifolium pratense HOM05D000855 ORTHO05D002321 4.8e-12 77.0 134 38.8
Potri.010G216900 Populus trichocarpa HOM05D000855 ORTHO05D002321 6.3e-12 76.6 79 49.4
PGR044G1213 Punica granatum HOM05D000855 ORTHO05D002321 6.3e-12 76.6 76 50.0
TPR.G39346 Trifolium pratense HOM05D001093 ORTHO05D000743 6.3e-12 76.6 137 43.8
TWI38G0064 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 8.2e-12 76.3 111 40.5
TAR633G0412 Trochodendron aralioides HOM05D000855 ORTHO05D002321 8.2e-12 76.3 91 46.2
Manes.10G041900 Manihot esculenta HOM05D000855 ORTHO05D002321 1.1e-11 75.9 88 51.1
Manes.10G041700 Manihot esculenta HOM05D000855 ORTHO05D002321 1.4e-11 75.5 120 40.8
Psat6g049760 Pisum sativum HOM05D000855 ORTHO05D002321 1.8e-11 75.1 143 38.5
Gohir.A05G344100 Gossypium hirsutum HOM05D000855 ORTHO05D002321 2.4e-11 74.7 59 61.0
Lj1C924G11 Lonicera japonica HOM05D000855 ORTHO05D001431 2.4e-11 74.7 118 39.8
Sc20g0002090 Simmondsia chinensis HOM05D000855 ORTHO05D002321 3.1e-11 74.3 92 44.6
AUR62017379 Chenopodium quinoa HOM05D000855 ORTHO05D002321 4.1e-11 73.9 62 54.8
MD01G1112200 Malus domestica HOM05D000855 ORTHO05D002321 4.1e-11 73.9 97 45.4
Psat7g011440 Pisum sativum HOM05D000252 ORTHO05D015734 4.1e-11 73.9 43 81.4
Sed0010715 Sechium edule HOM05D000855 ORTHO05D002321 4.1e-11 73.9 59 57.6
EL10Ac5g12631 Beta vulgaris HOM05D000855 ORTHO05D002321 1.2e-10 72.4 63 55.6
Actinidia38246 Actinidia chinensis HOM05D000855 ORTHO05D002321 2.0e-10 71.6 167 32.3
Gohir.A05G344300 Gossypium hirsutum HOM05D000855 ORTHO05D002321 2.0e-10 71.6 59 57.6
Gorai.012G093500 Gossypium raimondii HOM05D000855 ORTHO05D002321 2.0e-10 71.6 59 57.6
Psat5g140120 Pisum sativum HOM05D019138 ORTHO05D015734 2.0e-10 71.6 43 74.4
AUR62010520 Chenopodium quinoa HOM05D000855 ORTHO05D002321 3.4e-10 70.9 103 41.7
Ca_19334_v3 Cicer arietinum L. HOM05D001093 ORTHO05D000743 3.4e-10 70.9 106 47.2
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 3.4e-10 70.9 71 53.5
Gohir.D04G082800 Gossypium hirsutum HOM05D000855 ORTHO05D002321 3.4e-10 70.9 59 57.6
Psat4g211480 Pisum sativum HOM05D001107 ORTHO05D001095 3.4e-10 70.9 43 74.4
Gorai.012G093200 Gossypium raimondii HOM05D000855 ORTHO05D002321 5.9e-10 70.1 59 59.3
Gohir.D04G082500 Gossypium hirsutum HOM05D000855 ORTHO05D002321 1.0e-09 69.3 59 59.3
Lj3C979T7 Lonicera japonica HOM05D000855 ORTHO05D002321 1.0e-09 69.3 85 45.9
Prupe.6G241400 Prunus persica HOM05D000855 ORTHO05D002321 1.0e-09 69.3 87 42.5
Rhsim09G0154300 Rhododendron simsii HOM05D000855 ORTHO05D002321 1.0e-09 69.3 127 33.9
RcHm_v2.0_Chr3g0468791 Rosa chinensis HOM05D000855 ORTHO05D002321 1.0e-09 69.3 88 40.9
CSS0000157 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D002321 2.2e-09 68.2 88 43.2
Psat2g115600 Pisum sativum HOM05D019138 ORTHO05D015734 2.2e-09 68.2 43 76.7
Sabra08G0030900 Salix brachista HOM05D000855 ORTHO05D002321 2.2e-09 68.2 90 44.4
Medtr6g034375 Medicago truncatula HOM05D001093 ORTHO05D000743 2.9e-09 67.8 180 35.0
MD07G1179800 Malus domestica HOM05D000855 ORTHO05D002321 5.0e-09 67.0 60 53.3
Aqoxy1G01590 Aquilegia oxysepala HOM05D000855 ORTHO05D002321 6.5e-09 66.6 115 40.9
QL07p045288 Quercus lobata HOM05D000855 ORTHO05D002321 6.5e-09 66.6 86 41.9
Haze_20651 Corylus avellana HOM05D000855 ORTHO05D002321 8.5e-09 66.2 90 38.9
Psat1g067840 Pisum sativum HOM05D000657 ORTHO05D002092 8.5e-09 66.2 42 73.8
Lj2g0025985 Lotus japonicus HOM05D001093 ORTHO05D008729 1.1e-08 65.9 176 31.8
Medtr6g044600 Medicago truncatula HOM05D001093 ORTHO05D000743 1.4e-08 65.5 176 34.1
Manes.08G003300 Manihot esculenta HOM05D000855 ORTHO05D002321 1.9e-08 65.1 87 41.4
vmacro20062 Vaccinium macrocarpon HOM05D000855 ORTHO05D002321 1.9e-08 65.1 89 42.7
HPP92_012068 Vanilla planifolia HOM05D000855 ORTHO05D002321 1.9e-08 65.1 77 44.2
HPP92_018114 Vanilla planifolia HOM05D000855 ORTHO05D002321 1.9e-08 65.1 131 32.8
Potri.016G085500 Populus trichocarpa HOM05D000855 ORTHO05D002321 2.5e-08 64.7 91 40.7
vmacro04892 Vaccinium macrocarpon HOM05D000855 ORTHO05D002321 2.5e-08 64.7 61 49.2
PSO339G4758 Papaver somniferum HOM05D000855 ORTHO05D002321 4.2e-08 63.9 90 43.3
FAN09G3879 Fragaria x ananassa HOM05D000855 ORTHO05D002321 5.5e-08 63.5 71 43.7
Sopen04g020580 Solanum pennellii HOM05D000855 ORTHO05D002321 5.5e-08 63.5 70 47.1
Aqoxy4G03191 Aquilegia oxysepala HOM05D000855 ORTHO05D002321 7.2e-08 63.2 118 34.7
PGSC0003DMG400010571 Solanum tuberosum HOM05D000855 ORTHO05D002321 7.2e-08 63.2 70 47.1
Cc06_g03560 Coffea canephora HOM05D000855 ORTHO05D002321 9.3e-08 62.8 109 37.6
FvH4_6g15320 Fragaria vesca HOM05D000855 ORTHO05D002321 9.3e-08 62.8 118 33.9
FAN14G3376 Fragaria x ananassa HOM05D000855 ORTHO05D002321 9.3e-08 62.8 118 33.9
Nitab4.5_0005387g0010 Nicotiana tabacum HOM05D000855 ORTHO05D002321 9.3e-08 62.8 57 56.1
RhsimUnG0118400 Rhododendron simsii HOM05D000855 ORTHO05D002321 9.3e-08 62.8 93 39.8
FAN05G0228 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.2e-07 62.4 88 36.4
Actinidia04696 Actinidia chinensis HOM05D000855 ORTHO05D002321 1.6e-07 62.0 65 49.2
Actinidia19715 Actinidia chinensis HOM05D000855 ORTHO05D002321 1.6e-07 62.0 65 49.2
Glyma.10G192100 Glycine max HOM05D000855 ORTHO05D002321 1.6e-07 62.0 81 44.4
MBI14_g26603_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D002321 1.6e-07 62.0 59 50.8
PSO384G0136 Papaver somniferum HOM05D000855 ORTHO05D002321 1.6e-07 62.0 57 54.4
Peaxi162Scf00373g00021 Petunia axillaris HOM05D000855 ORTHO05D002321 1.6e-07 62.0 57 56.1
VMungo0720G0832 Vigna mungo HOM05D000855 ORTHO05D002321 2.1e-07 61.6 95 42.1
TWI74G1097 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 2.7e-07 61.2 83 41.0
CiPaw.09G180000 Carya illinoinensis HOM05D000855 ORTHO05D002321 3.6e-07 60.8 130 30.0
FAN02G1340 Fragaria x ananassa HOM05D000855 ORTHO05D002321 3.6e-07 60.8 71 42.3
Duzib128G0638 Durio zibethinus HOM05D000855 ORTHO05D002321 4.6e-07 60.5 86 39.5
Hma1.2p1_0111F.1_g053880 Hydrangea macrophylla HOM05D000855 ORTHO05D002321 4.6e-07 60.5 70 45.7
COL.COLO4_27083 Corchorus olitorius HOM05D000855 ORTHO05D002321 6.1e-07 60.1 82 39.0
Nitab4.5_0000061g0230 Nicotiana tabacum HOM05D000855 ORTHO05D002321 6.1e-07 60.1 81 46.9
ECA233G6180 Erigeron canadensis HOM05D000855 ORTHO05D002321 1.0e-06 59.3 58 46.6
MD12G1124400 Malus domestica HOM05D000855 ORTHO05D002321 1.3e-06 58.9 87 37.9
Phvul.004G100400 Phaseolus vulgaris HOM05D001093 ORTHO05D000743 1.3e-06 58.9 238 29.4
Phvul.007G163600 Phaseolus vulgaris HOM05D000855 ORTHO05D002321 1.3e-06 58.9 103 36.9
PGR004G1993 Punica granatum HOM05D000855 ORTHO05D002321 1.3e-06 58.9 77 45.5
Cpa.g.sc114.40 Carica papaya HOM05D000855 ORTHO05D002321 1.8e-06 58.5 87 40.2
Ciclev10010946m.g Citrus clementina HOM05D000855 ORTHO05D002321 1.8e-06 58.5 60 50.0
Medtr2g104120 Medicago truncatula HOM05D000855 ORTHO05D002321 1.8e-06 58.5 103 34.0
CAN.G113.8 Capsicum annuum HOM05D000855 ORTHO05D002321 2.3e-06 58.2 71 46.5
Duzib093G2126 Durio zibethinus HOM05D000855 ORTHO05D002321 2.3e-06 58.2 82 40.2
Potri.006G131800 Populus trichocarpa HOM05D000855 ORTHO05D002321 2.3e-06 58.2 85 37.6
ECA238G0012 Erigeron canadensis HOM05D000855 ORTHO05D002321 3.9e-06 57.4 65 47.7
Lalb_Chr21g0314651 Lupinus albus HOM05D000855 ORTHO05D002321 3.9e-06 57.4 92 38.0
Sabra06G0103400 Salix brachista HOM05D000855 ORTHO05D002321 3.9e-06 57.4 85 36.5
Thecc.05G053800 Theobroma cacao HOM05D000855 ORTHO05D002321 3.9e-06 57.4 127 31.5
TWI77G0883 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 3.9e-06 57.4 62 45.2
Lj5g0028198 Lotus japonicus HOM05D000855 ORTHO05D002321 5.1e-06 57.0 62 48.4
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 5.1e-06 57.0 86 36.0
MSTRG.27446 Avicennia marina HOM05D000855 ORTHO05D002321 6.7e-06 56.6 88 38.6
DCAR_006467 Daucus carota HOM05D000855 ORTHO05D002321 6.7e-06 56.6 70 45.7
Sed0017477 Sechium edule HOM05D000855 ORTHO05D002321 6.7e-06 56.6 83 39.8
Ca_10609_v3 Cicer arietinum L. HOM05D000029 ORTHO05D003879 8.7e-06 56.2 42 66.7


User provided reference genes

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