Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 1.1e-144 516.5 255 100.0
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 2.2e-124 449.1 251 88.0
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 2.2e-124 449.1 251 89.2
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 2.5e-123 445.7 257 86.0
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 4.2e-123 444.9 259 84.9
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 2.7e-122 442.2 258 84.1
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 2.3e-121 439.1 258 83.7
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 2.8e-119 432.2 258 81.8
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 3.7e-119 431.8 255 83.1
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 6.3e-119 431.0 259 82.2
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 1.1e-118 430.3 260 83.8
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 3.1e-118 428.7 252 81.7
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 5.3e-118 427.9 257 82.1
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 6.9e-118 427.6 256 81.2
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 1.2e-117 426.8 256 81.2
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 2.0e-109 399.4 250 77.2
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 5.9e-109 397.9 252 76.6
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 2.9e-108 395.6 256 73.0
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 2.9e-108 395.6 252 77.8
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 1.1e-107 393.7 256 73.4
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 1.4e-107 393.3 256 73.4
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 3.2e-107 392.1 256 72.3
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 4.2e-107 391.7 251 76.9
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 4.2e-107 391.7 256 72.3
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 4.2e-107 391.7 251 76.1
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 2.1e-106 389.4 252 74.2
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 3.6e-106 388.7 251 73.7
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 6.1e-106 387.9 252 73.8
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 3.9e-105 385.2 246 76.4
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 5.1e-105 384.8 252 74.6
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 8.8e-105 384.0 254 73.6
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 5.7e-104 381.3 253 73.5
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 6.3e-103 377.9 251 70.5
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 3.1e-102 375.6 250 74.4
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 4.1e-102 375.2 254 73.2
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 5.3e-102 374.8 252 73.0
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 1.2e-101 373.6 251 73.7
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 1.2e-101 373.6 254 72.8
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.5e-101 373.2 254 73.6
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 3.5e-101 372.1 220 80.5
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 1.7e-100 369.8 254 70.9
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 2.2e-100 369.4 251 72.9
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 2.2e-100 369.4 220 80.0
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 5.0e-100 368.2 220 80.0
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 5.0e-100 368.2 220 80.0
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 1.1e-99 367.1 241 71.8
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 1.1e-99 367.1 220 80.0
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.5e-99 366.7 252 70.6
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.9e-99 366.3 254 71.7
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 3.2e-99 365.5 254 71.7
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 4.2e-99 365.2 215 79.5
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.1e-98 362.8 254 71.3
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.7e-98 362.5 254 71.3
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 2.7e-98 362.5 254 72.0
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 2.7e-98 362.5 248 71.0
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 6.1e-98 361.3 252 68.7
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 6.1e-98 361.3 253 69.6
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 8.0e-98 360.9 217 78.8
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 1.0e-97 360.5 247 69.6
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 1.0e-97 360.5 253 71.1
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 1.4e-97 360.1 219 79.0
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.3e-97 359.4 254 71.3
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 3.9e-97 358.6 250 68.0
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 8.8e-97 357.5 251 70.1
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 8.8e-97 357.5 248 69.8
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 2.0e-96 356.3 255 68.2
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 2.6e-96 355.9 245 71.0
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 9.7e-96 354.0 220 77.3
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 1.7e-95 353.2 257 67.7
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 1.1e-94 350.5 215 78.6
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 1.4e-94 350.1 226 72.6
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 3.1e-94 349.0 257 67.3
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 3.1e-94 349.0 247 68.4
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 7.0e-94 347.8 211 76.8
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 9.1e-94 347.4 255 68.2
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 2.0e-93 346.3 250 68.4
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 3.5e-93 345.5 251 68.1
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 3.8e-92 342.0 251 66.1
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 1.9e-91 339.7 247 68.8
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.5e-91 339.3 250 67.2
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 4.2e-91 338.6 227 72.2
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 5.5e-91 338.2 226 73.0
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.4e-89 333.6 215 72.6
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 1.8e-89 333.2 230 70.4
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 2.3e-89 332.8 211 73.5
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 3.0e-89 332.4 246 67.9
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 6.8e-89 331.3 225 72.0
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 6.8e-89 331.3 222 73.4
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 6.8e-89 331.3 217 73.3
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 2.0e-88 329.7 244 67.6
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 2.6e-88 329.3 246 67.9
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 2.6e-88 329.3 251 63.7
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 5.7e-88 328.2 228 71.1
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 5.7e-88 328.2 228 71.1
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 5.7e-88 328.2 228 71.1
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 6.3e-87 324.7 224 70.1
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 8.3e-87 324.3 225 71.1
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 1.4e-86 323.6 225 70.7
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 1.8e-86 323.2 246 67.5
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 2.7e-85 319.3 224 70.5
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 3.5e-85 318.9 245 63.3
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 1.0e-84 317.4 225 68.9
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 1.0e-84 317.4 243 62.1
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 2.9e-84 315.8 244 66.0
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 6.5e-84 314.7 223 69.1
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 6.5e-84 314.7 223 69.1
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 1.9e-83 313.2 209 71.3
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 4.2e-83 312.0 225 67.6
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 2.1e-82 309.7 242 61.2
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 6.8e-81 304.7 245 58.8
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 1.7e-79 300.1 186 76.9
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 2.8e-79 299.3 227 65.2
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 8.3e-79 297.7 210 65.2
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 4.5e-77 292.0 246 57.3
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 1.0e-76 290.8 210 64.8
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.3e-76 290.4 250 60.4
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 2.1e-74 283.1 214 60.7
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 3.0e-73 279.3 215 65.6
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 8.9e-65 251.1 186 64.0
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 7.0e-62 241.5 163 69.9
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 2.9e-47 193.0 139 68.3
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 1.4e-46 190.7 175 57.1
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 2.4e-46 189.9 144 62.5
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 2.3e-44 183.3 218 43.6
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 9.9e-40 167.9 114 71.1
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 5.8e-32 142.1 170 42.9
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 7.6e-32 141.7 193 44.0
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 3.2e-30 136.3 100 63.0
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 3.0e-12 76.6 50 70.0
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 6.3e-10 68.9 54 61.1
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 6.5e-07 58.9 46 56.5
Cfa025913 Carpinus fangiana HOM05D006345 ORTHO05D007428 8.4e-07 58.5 217 27.2
Psat5g082160 Pisum sativum HOM05D006345 ORTHO05D007428 1.1e-06 58.2 29 86.2


User provided reference genes

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