Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 1.7e-76 289.3 143 100.0
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.4e-67 259.6 143 87.4
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.4e-67 259.6 143 87.4
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 1.7e-65 252.7 141 86.5
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 3.6e-63 245.0 141 83.7
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 4.7e-63 244.6 141 83.7
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 3.3e-61 238.4 141 81.6
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 2.4e-59 232.3 135 83.7
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 9.1e-59 230.3 134 82.1
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 2.0e-58 229.2 133 82.7
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 2.0e-58 229.2 140 77.1
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 2.6e-58 228.8 138 78.3
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 5.9e-58 227.6 137 78.8
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 5.9e-58 227.6 141 77.3
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 5.9e-58 227.6 134 82.1
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 1.3e-57 226.5 137 78.8
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 1.3e-57 226.5 137 78.8
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 1.3e-57 226.5 137 78.8
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 1.3e-57 226.5 137 78.8
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 1.7e-57 226.1 137 78.1
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 2.2e-57 225.7 137 77.4
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 3.8e-57 224.9 141 77.3
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 6.5e-57 224.2 133 80.5
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 8.5e-57 223.8 138 78.3
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 8.5e-57 223.8 137 78.1
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 8.5e-57 223.8 137 75.9
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 8.5e-57 223.8 133 79.7
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 1.1e-56 223.4 137 76.6
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.1e-56 223.4 138 77.5
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.1e-56 223.4 138 77.5
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.5e-56 223.0 138 77.5
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 2.5e-56 222.2 138 78.3
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 2.5e-56 222.2 138 78.3
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 3.2e-56 221.9 137 77.4
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 7.2e-56 220.7 138 76.8
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 1.2e-55 219.9 137 75.2
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 2.1e-55 219.2 138 77.5
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 3.6e-55 218.4 138 76.8
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 3.6e-55 218.4 142 75.4
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 3.6e-55 218.4 138 77.5
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 4.7e-55 218.0 138 77.5
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 6.1e-55 217.6 138 74.6
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 6.1e-55 217.6 138 76.8
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 8.0e-55 217.2 142 76.8
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.0e-54 216.9 137 74.5
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 2.3e-54 215.7 136 76.5
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.3e-54 215.7 136 74.3
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 2.3e-54 215.7 138 75.4
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 4.0e-54 214.9 135 77.8
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 4.0e-54 214.9 144 72.9
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 5.2e-54 214.5 140 75.0
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 5.2e-54 214.5 138 76.1
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 8.8e-54 213.8 135 74.1
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 8.8e-54 213.8 142 73.2
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 1.2e-53 213.4 134 75.4
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 1.2e-53 213.4 138 73.9
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.5e-53 213.0 135 75.6
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 2.0e-53 212.6 138 73.9
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 2.6e-53 212.2 138 73.2
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 3.3e-53 211.8 142 71.1
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 4.4e-53 211.5 138 72.5
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 5.7e-53 211.1 138 71.7
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 5.7e-53 211.1 136 72.8
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 7.5e-53 210.7 141 73.8
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.7e-52 209.5 135 73.3
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 1.7e-52 209.5 141 73.0
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 2.8e-52 208.8 142 70.4
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 2.8e-52 208.8 135 74.8
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 2.8e-52 208.8 138 71.0
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 4.8e-52 208.0 135 74.8
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 6.3e-52 207.6 138 70.3
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 1.4e-51 206.5 135 69.6
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.4e-51 205.7 135 74.8
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 2.4e-51 205.7 135 70.4
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 3.1e-51 205.3 135 69.6
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 3.1e-51 205.3 135 71.1
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 5.3e-51 204.5 135 72.6
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 9.1e-51 203.8 138 68.8
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.6e-50 203.0 142 68.3
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 2.0e-50 202.6 135 73.3
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 2.0e-50 202.6 135 73.3
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 2.7e-50 202.2 134 70.9
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 2.7e-50 202.2 134 70.1
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 3.5e-50 201.8 136 69.9
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 4.5e-50 201.4 142 67.6
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.5e-50 201.4 142 67.6
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 7.7e-50 200.7 134 72.4
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.9e-48 196.1 137 67.9
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 4.2e-48 194.9 138 65.9
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 5.5e-48 194.5 138 66.7
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 2.3e-46 189.1 131 71.0
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 4.0e-46 188.3 127 74.0
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 5.7e-45 184.5 141 67.4
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 1.3e-41 173.3 140 63.6
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 6.5e-41 171.0 138 61.6
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 1.9e-40 169.5 105 78.1
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.3e-40 168.7 155 58.7
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 1.6e-39 166.4 116 71.6
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 4.0e-38 161.8 95 77.9
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 4.9e-36 154.8 127 64.6
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.1e-35 153.7 153 56.9
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 1.8e-35 152.9 95 74.7
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 4.1e-35 151.8 128 59.4
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 7.0e-35 151.0 138 60.1
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 9.2e-35 150.6 103 70.9
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 9.2e-35 150.6 129 55.8
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.5e-32 143.3 94 70.2
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 7.3e-32 141.0 138 55.1
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 2.8e-31 139.0 95 69.5
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 4.0e-30 135.2 97 66.0
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.5e-29 133.3 138 55.1
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 3.4e-29 132.1 134 53.7
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 3.7e-20 102.1 96 52.1
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 6.4e-20 101.3 129 44.2
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 6.4e-20 101.3 91 57.1
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 8.3e-20 100.9 138 42.0
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 7.8e-18 94.4 138 41.3
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 6.6e-17 91.3 118 41.5
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 1.9e-16 89.7 63 68.3
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 1.9e-16 89.7 46 91.3
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 2.5e-16 89.4 60 70.0
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 2.8e-15 85.9 63 65.1
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 5.2e-14 81.6 126 35.7
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 1.3e-12 77.0 49 73.5
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 5.6e-08 61.6 41 70.7
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 5.6e-08 61.6 37 75.7
SEGI_40910 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 3.6e-07 58.9 51 49.0
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 4.0e-06 55.5 32 78.1


User provided reference genes

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