Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g215560 Pisum sativum HOM05D000480 ORTHO05D000313 7.4e-75 283.9 152 100.0
Psat4g133880 Pisum sativum HOM05D000480 ORTHO05D000313 3.6e-37 158.7 160 61.9
Ca_26580_v3 Cicer arietinum L. HOM05D000480 ORTHO05D000313 9.1e-33 144.1 156 57.1
Psat4g134080 Pisum sativum HOM05D000480 ORTHO05D000313 9.8e-27 124.0 136 57.4
Psat4g128440 Pisum sativum HOM05D000480 ORTHO05D000313 2.2e-26 122.9 147 53.1
TPR.G26544 Trifolium pratense HOM05D000480 ORTHO05D000313 1.1e-25 120.6 148 56.8
Medtr8g066670 Medicago truncatula HOM05D000001 ORTHO05D000003 2.4e-25 119.4 156 48.7
Medtr8g072510 Medicago truncatula HOM05D000480 ORTHO05D000313 3.1e-25 119.0 146 51.4
TPR.G15136 Trifolium pratense HOM05D000480 ORTHO05D000313 1.6e-24 116.7 151 51.0
Medtr8g069880 Medicago truncatula HOM05D000480 ORTHO05D000313 2.0e-24 116.3 162 50.6
Medtr8g062410 Medicago truncatula HOM05D000480 ORTHO05D000313 3.8e-23 112.1 153 50.3
Medtr3g016210 Medicago truncatula HOM05D000480 ORTHO05D000313 1.5e-22 110.2 152 51.3
TPR.G17371 Trifolium pratense HOM05D000480 ORTHO05D000313 1.9e-22 109.8 156 47.4
TPR.G33840 Trifolium pratense HOM05D000480 ORTHO05D000313 1.2e-21 107.1 159 47.2
Glyma.12G162927 Glycine max HOM05D000480 ORTHO05D000313 8.0e-21 104.4 165 45.5
Ca_26582_v3 Cicer arietinum L. HOM05D000480 ORTHO05D000313 1.4e-20 103.6 94 67.0
TPR.G36285 Trifolium pratense HOM05D000480 ORTHO05D000313 1.4e-20 103.6 85 70.6
Ca_22756_v3 Cicer arietinum L. HOM05D000480 ORTHO05D000313 6.8e-20 101.3 100 60.0
Medtr8g467780 Medicago truncatula HOM05D000480 ORTHO05D000313 1.2e-19 100.5 117 53.8
Medtr8g040930 Medicago truncatula HOM05D000480 ORTHO05D000313 4.4e-19 98.6 121 46.3
Medtr8g041240 Medicago truncatula HOM05D000480 ORTHO05D000313 4.4e-19 98.6 121 46.3
Medtr8g039620 Medicago truncatula HOM05D000480 ORTHO05D000313 1.7e-18 96.7 140 45.0
Phvul.011G163400 Phaseolus vulgaris HOM05D000480 ORTHO05D000313 1.7e-18 96.7 168 42.9
TPR.G13724 Trifolium pratense HOM05D000480 ORTHO05D000313 1.7e-18 96.7 151 43.0
Glyma.06G237900 Glycine max HOM05D000480 ORTHO05D000313 4.9e-18 95.1 137 43.1
TPR.G29443 Trifolium pratense HOM05D000480 ORTHO05D000313 6.3e-18 94.7 152 42.8
Psat4g128400 Pisum sativum HOM05D000480 ORTHO05D000313 1.1e-17 94.0 144 46.5
TPR.G22961 Trifolium pratense HOM05D000480 ORTHO05D000313 1.8e-17 93.2 157 41.4
Psat4g105000 Pisum sativum HOM05D000480 ORTHO05D000313 7.0e-17 91.3 151 41.7
Medtr7g021090 Medicago truncatula HOM05D000480 ORTHO05D000313 2.7e-16 89.4 115 49.6
Medtr1g059930 Medicago truncatula HOM05D000480 ORTHO05D000313 1.3e-15 87.0 89 56.2
Phvul.011G163900 Phaseolus vulgaris HOM05D000480 ORTHO05D000313 5.0e-15 85.1 121 43.0
Medtr8g068990 Medicago truncatula HOM05D000480 ORTHO05D000313 1.5e-14 83.6 84 54.8
Medtr8g073275 Medicago truncatula HOM05D000480 ORTHO05D000313 9.5e-14 80.9 163 36.8
TPR.G10204 Trifolium pratense HOM05D000480 ORTHO05D000313 8.0e-13 77.8 140 40.7
Lj3g0000562 Lotus japonicus HOM05D000480 ORTHO05D000313 1.8e-12 76.6 110 43.6
Medtr8g073260 Medicago truncatula HOM05D000480 ORTHO05D000313 7.5e-11 71.2 166 38.6
Lj3g0016586 Lotus japonicus HOM05D000480 ORTHO05D000313 1.3e-10 70.5 115 39.1
Lj3g0015410 Lotus japonicus HOM05D000480 ORTHO05D000313 4.9e-10 68.6 63 60.3
Glyma.06G242000 Glycine max HOM05D000480 ORTHO05D000313 1.1e-09 67.4 151 35.8
TPR.G35327 Trifolium pratense HOM05D000480 ORTHO05D000313 1.8e-09 66.6 70 54.3
Glyma.06G241300 Glycine max HOM05D000480 ORTHO05D000313 7.0e-09 64.7 137 35.8
arahy.Tifrunner.gnm1.ann1.GU1UEY Arachis hypogaea HOM05D000480 ORTHO05D000313 9.2e-09 64.3 142 32.4
Glyma.06G241600 Glycine max HOM05D000480 ORTHO05D000313 1.2e-08 63.9 153 33.3
Phvul.011G163300 Phaseolus vulgaris HOM05D000480 ORTHO05D000313 1.7e-07 60.1 129 37.2
Phvul.011G164100 Phaseolus vulgaris HOM05D000480 ORTHO05D000313 2.3e-07 59.7 147 34.0
Gorai.003G176800 Gossypium raimondii HOM05D000480 ORTHO05D000313 6.6e-07 58.2 136 35.3
Thecc.10G056700 Theobroma cacao HOM05D000480 ORTHO05D000313 1.1e-06 57.4 162 32.1
Thecc.10G055800 Theobroma cacao HOM05D000480 ORTHO05D000313 1.5e-06 57.0 160 32.5
Eucgr.D01212 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.9e-06 56.6 115 40.0
Lsat_1_v5_gn_1_43561 Lactuca sativa HOM05D000250 ORTHO05D011838 4.3e-06 55.5 121 34.7
Lj1g0008219 Lotus japonicus HOM05D000480 ORTHO05D000313 4.3e-06 55.5 156 34.0
TAR375G0700 Trochodendron aralioides HOM05D000480 ORTHO05D000313 4.3e-06 55.5 92 45.7
Cfa012319 Carpinus fangiana HOM05D000480 ORTHO05D000313 5.6e-06 55.1 118 33.1
CiPaw.11G073600 Carya illinoinensis HOM05D000480 ORTHO05D000313 5.6e-06 55.1 122 36.9
Gohir.A03G004000 Gossypium hirsutum HOM05D000480 ORTHO05D000313 5.6e-06 55.1 136 34.6
Lsat_1_v5_gn_1_84340 Lactuca sativa HOM05D000448 ORTHO05D000313 5.6e-06 55.1 149 31.5
arahy.Tifrunner.gnm1.ann1.FECP0X Arachis hypogaea HOM05D000448 ORTHO05D000291 7.3e-06 54.7 141 29.8
Gohir.D03G168400 Gossypium hirsutum HOM05D000480 ORTHO05D000313 7.3e-06 54.7 141 32.6
arahy.Tifrunner.gnm1.ann1.U4K0HX Arachis hypogaea HOM05D000480 ORTHO05D000313 9.5e-06 54.3 126 34.1
Psat4g133840 Pisum sativum HOM05D000480 ORTHO05D000313 9.5e-06 54.3 31 77.4


User provided reference genes

Program Settings