Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 1.1e-69 266.5 133 100.0
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 1.1e-55 219.9 129 85.3
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 2.0e-55 219.2 133 80.5
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 6.3e-38 161.0 133 65.4
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 1.6e-36 156.4 134 59.0
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 4.7e-33 144.8 129 61.2
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 1.2e-31 140.2 134 59.7
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 5.3e-29 131.3 135 57.8
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 5.0e-27 124.8 137 52.6
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 1.1e-26 123.6 102 58.8
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 2.3e-24 115.9 147 46.3
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 6.8e-24 114.4 133 45.1
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 3.4e-23 112.1 129 45.0
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 5.4e-21 104.8 139 41.7
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 1.6e-20 103.2 132 43.9
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 3.5e-20 102.1 87 52.9
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 1.0e-19 100.5 132 43.9
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 1.3e-19 100.1 107 45.8
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 5.5e-18 94.7 138 44.2
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 9.5e-18 94.0 139 41.7
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 2.8e-17 92.4 88 50.0
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 6.1e-17 91.3 89 52.8
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 6.8e-16 87.8 99 46.5
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 1.2e-15 87.0 132 40.9
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 1.3e-14 83.6 83 49.4
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 1.1e-13 80.5 99 41.4
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 1.4e-13 80.1 98 42.9
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 2.4e-13 79.3 110 43.6
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 5.9e-12 74.7 134 39.6
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 7.8e-12 74.3 80 43.8
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 7.8e-12 74.3 134 38.8
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.7e-11 73.2 89 46.1
Sc07g0007160 Simmondsia chinensis HOM05D009134 ORTHO05D011284 5.0e-11 71.6 119 35.3
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.4e-08 63.5 123 38.2
Thhalv10001781m.g Eutrema salsugineum HOM05D012296 ORTHO05D014409 9.8e-07 57.4 85 37.6
Sabra07G0105900 Salix brachista HOM05D000578 ORTHO05D000422 8.3e-06 54.3 61 44.3


User provided reference genes

Program Settings