Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g208840 Pisum sativum HOM05D002816 ORTHO05D020972 6.7e-125 450.7 225 100.0
Psat7g208880 Pisum sativum HOM05D002816 ORTHO05D020972 4.9e-99 364.8 223 85.2
Psat0s4110g0040 Pisum sativum HOM05D002816 ORTHO05D020972 1.5e-92 343.2 217 82.5
Psat6g115360 Pisum sativum HOM05D002816 ORTHO05D020972 3.6e-86 322.0 218 78.4
Psat1g045080 Pisum sativum HOM05D002816 ORTHO05D005633 1.1e-53 214.2 148 80.4
Psat3g108720 Pisum sativum HOM05D002816 ORTHO05D020972 3.1e-53 212.6 143 82.5
Psat1g045000 Pisum sativum HOM05D002816 ORTHO05D020972 9.0e-53 211.1 161 73.3
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 6.9e-45 184.9 159 69.2
Psat6g177280 Pisum sativum HOM05D002816 ORTHO05D020972 6.9e-45 184.9 145 73.8
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 4.2e-42 175.6 148 68.2
TPR.G18843 Trifolium pratense HOM05D002816 ORTHO05D005633 4.2e-42 175.6 148 68.9
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 1.2e-36 157.5 176 56.2
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 7.6e-36 154.8 173 57.2
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 2.2e-35 153.3 173 56.6
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 7.2e-34 148.3 120 66.7
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 4.8e-30 135.6 176 48.3
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 6.3e-30 135.2 117 62.4
Lj3g0024115 Lotus japonicus HOM05D002816 ORTHO05D005633 5.9e-28 128.6 142 54.2
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 1.0e-27 127.9 171 48.0
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 1.7e-27 127.1 171 47.4
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 2.2e-27 126.7 119 58.0
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 1.4e-26 124.0 116 53.4
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 2.5e-26 123.2 173 46.2
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 7.2e-26 121.7 148 49.3
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 1.6e-25 120.6 112 54.5
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 1.6e-25 120.6 171 39.8
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 2.1e-25 120.2 115 53.9
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 4.6e-25 119.0 171 40.4
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 6.1e-25 118.6 151 46.4
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 6.1e-25 118.6 116 51.7
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 7.9e-25 118.2 116 56.0
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 1.0e-24 117.9 117 50.4
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 1.4e-24 117.5 159 45.9
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 1.4e-24 117.5 148 50.0
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 1.4e-24 117.5 115 52.2
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 1.8e-24 117.1 148 50.0
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 1.8e-24 117.1 115 52.2
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 2.3e-24 116.7 114 50.9
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 2.3e-24 116.7 128 50.8
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 5.1e-24 115.5 151 45.7
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 6.7e-24 115.2 114 49.1
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 2.0e-23 113.6 114 51.8
CSS0039119 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 3.3e-23 112.8 118 51.7
MBI04_g14277_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 5.7e-23 112.1 112 53.6
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 5.7e-23 112.1 114 50.9
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 1.3e-22 110.9 172 42.4
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 1.7e-22 110.5 172 41.9
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 1.7e-22 110.5 114 49.1
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 2.2e-22 110.2 116 48.3
Atru.chr3.2513 Acer truncatum HOM05D002816 ORTHO05D005633 2.8e-22 109.8 114 52.6
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 2.8e-22 109.8 118 51.7
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 3.7e-22 109.4 115 48.7
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 4.8e-22 109.0 118 49.2
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 6.3e-22 108.6 172 41.3
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 8.2e-22 108.2 118 48.3
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 8.2e-22 108.2 174 39.7
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 1.1e-21 107.8 159 42.1
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 1.1e-21 107.8 114 49.1
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 1.4e-21 107.5 117 46.2
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 1.8e-21 107.1 169 36.7
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 2.4e-21 106.7 115 53.9
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 3.1e-21 106.3 175 42.3
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 5.3e-21 105.5 149 40.9
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 5.3e-21 105.5 136 43.4
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 5.3e-21 105.5 114 51.8
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 6.9e-21 105.1 116 47.4
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 6.9e-21 105.1 114 50.9
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 6.9e-21 105.1 114 50.9
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 1.2e-20 104.4 174 36.8
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 1.5e-20 104.0 156 41.0
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 2.0e-20 103.6 116 49.1
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 2.0e-20 103.6 113 50.4
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 2.6e-20 103.2 172 39.5
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 7.7e-20 101.7 178 37.1
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 1.0e-19 101.3 132 47.0
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 1.0e-19 101.3 114 48.2
MBI04_g27134_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 2.2e-19 100.1 112 50.0
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 2.2e-19 100.1 113 49.6
Phvul.011G056700 Phaseolus vulgaris HOM05D002816 ORTHO05D005633 2.9e-19 99.8 82 63.4
CSS0015622 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 3.8e-19 99.4 142 43.7
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 5.0e-19 99.0 178 37.1
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 8.5e-19 98.2 176 36.4
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 2.5e-18 96.7 172 36.6
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 3.2e-18 96.3 116 43.1
FAN11G3609 Fragaria x ananassa HOM05D002816 ORTHO05D005633 3.2e-18 96.3 116 43.1
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 3.2e-18 96.3 116 43.1
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 4.2e-18 95.9 113 43.4
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 7.2e-18 95.1 113 46.9
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 1.2e-17 94.4 119 45.4
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 1.6e-17 94.0 115 44.3
Lj1A364T31 Lonicera japonica HOM05D002816 ORTHO05D005633 4.7e-17 92.4 88 54.5
Actinidia16293 Actinidia chinensis HOM05D002816 ORTHO05D005633 7.9e-17 91.7 86 55.8
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 1.4e-16 90.9 148 37.2
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 5.1e-16 89.0 171 33.3
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 5.1e-16 89.0 148 39.9
Lsat_1_v5_gn_6_50161 Lactuca sativa HOM05D002816 ORTHO05D005633 6.7e-16 88.6 154 38.3
Lju1319A3T41 Lonicera japonica HOM05D002816 ORTHO05D005633 6.7e-16 88.6 114 45.6
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 3.3e-15 86.3 108 45.4
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 4.4e-15 85.9 110 43.6
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 4.4e-15 85.9 174 32.2
CsaV3_4G023760 Cucumis sativus L. HOM05D002816 ORTHO05D005633 5.7e-15 85.5 110 41.8
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 7.4e-15 85.1 123 40.7
Actinidia39380 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.3e-14 84.3 71 59.2
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 4.8e-14 82.4 110 43.6
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 2.4e-13 80.1 100 46.0
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 3.1e-13 79.7 112 41.1
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 9.1e-13 78.2 117 41.0
Solyc01g006600.3 Solanum lycopersicum HOM05D002816 ORTHO05D005633 4.5e-12 75.9 68 54.4
Cc01_g04080 Coffea canephora HOM05D002816 ORTHO05D005633 2.9e-11 73.2 129 38.0
Actinidia06322 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.5e-07 60.8 43 69.8
SEGI_27256 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 3.3e-07 59.7 99 40.4
Glyma.12G054767 Glycine max HOM05D002816 ORTHO05D005633 1.3e-06 57.8 35 80.0
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 4.8e-06 55.8 116 35.3
SMO166G0063 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 4.8e-06 55.8 116 35.3
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 8.2e-06 55.1 97 39.2


User provided reference genes

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