Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 0.0e+00 1281.2 684 100.0
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 1.6e-254 882.9 698 71.3
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 3.0e-240 835.5 683 67.8
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 8.9e-229 797.3 688 66.9
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 5.4e-218 761.5 651 67.6
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 2.1e-185 653.3 688 56.0
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 5.3e-173 612.1 673 56.8
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 5.3e-173 612.1 673 56.8
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 5.3e-173 612.1 690 54.2
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 2.9e-171 606.3 688 53.3
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 1.4e-170 604.0 696 52.9
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 2.3e-168 596.7 683 51.8
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 6.8e-152 542.0 676 48.4
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 2.9e-147 526.6 676 48.2
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 2.9e-126 456.8 714 41.7
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 4.0e-112 409.8 687 39.6
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 8.9e-112 408.7 722 41.3
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 1.0e-107 395.2 675 39.0
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 1.9e-106 391.0 707 40.6
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 4.0e-104 383.3 661 41.3
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 7.6e-103 379.0 632 42.1
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 3.2e-101 373.6 672 37.2
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.7e-99 367.9 680 38.4
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 1.9e-98 364.4 683 36.5
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 4.8e-97 359.8 680 37.6
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 9.0e-96 355.5 669 36.6
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 1.2e-95 355.1 676 37.4
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 3.4e-95 353.6 674 38.9
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 7.6e-95 352.4 651 36.4
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 3.8e-94 350.1 668 37.6
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 1.1e-93 348.6 694 38.6
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 1.2e-92 345.1 736 34.9
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 2.1e-92 344.4 661 38.1
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 2.7e-92 344.0 685 37.7
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 1.0e-91 342.0 667 38.4
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 6.7e-91 339.3 665 36.1
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.1e-90 338.6 665 36.2
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 1.9e-90 337.8 674 36.4
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 5.6e-90 336.3 657 37.9
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 1.6e-89 334.7 665 36.1
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 2.1e-89 334.3 682 35.5
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 4.8e-89 333.2 681 35.5
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 6.2e-89 332.8 699 35.2
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 5.3e-88 329.7 725 34.3
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 2.6e-87 327.4 672 36.8
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 6.4e-86 322.8 643 35.5
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 1.4e-85 321.6 705 33.9
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 1.2e-84 318.5 672 36.0
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 3.7e-81 307.0 696 33.9
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 3.7e-81 307.0 718 33.6
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 4.8e-81 306.6 695 32.9
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 4.0e-80 303.5 702 35.8
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 9.0e-80 302.4 697 33.7
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 7.6e-79 299.3 683 35.0
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 2.9e-78 297.4 411 43.6
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 6.5e-78 296.2 688 32.1
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 9.3e-77 292.4 617 34.4
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 1.8e-75 288.1 660 33.0
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 2.1e-73 281.2 707 33.2
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 1.4e-72 278.5 674 32.8
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 2.4e-72 277.7 683 32.5
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 3.1e-72 277.3 694 32.6
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 1.5e-71 275.0 651 33.3
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 2.0e-71 274.6 692 32.8
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 2.0e-71 274.6 616 34.9
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 4.5e-71 273.5 692 32.7
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 1.7e-70 271.6 697 31.9
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 2.5e-69 267.7 715 31.7
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 1.3e-67 261.9 723 32.1
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 2.3e-67 261.2 693 31.2
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 1.1e-66 258.8 711 32.6
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 2.5e-66 257.7 587 32.5
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 2.5e-66 257.7 711 32.1
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 9.7e-66 255.8 636 31.6
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 1.6e-65 255.0 621 34.5
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 2.2e-65 254.6 678 32.6
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.1e-64 252.3 493 35.1
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 2.4e-64 251.1 576 34.4
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 5.3e-64 250.0 550 36.9
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 5.3e-64 250.0 647 31.7
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 1.5e-63 248.4 664 31.9
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 2.0e-63 248.1 550 37.3
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 7.2e-61 239.6 655 29.3
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 3.6e-60 237.3 661 29.2
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 1.4e-59 235.3 678 31.1
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 1.4e-59 235.3 647 30.4
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 3.0e-59 234.2 687 30.9
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 8.8e-59 232.6 569 34.3
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 2.2e-57 228.0 635 29.8
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 1.4e-56 225.3 411 36.3
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 5.9e-55 219.9 671 31.4
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 1.7e-54 218.4 707 28.3
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 4.2e-53 213.8 278 47.1
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 3.0e-51 207.6 359 37.9
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 4.8e-49 200.3 409 36.7
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 1.0e-46 192.6 677 27.0
FAN28G2072 Fragaria x ananassa HOM05D006730 ORTHO05D008189 6.1e-44 183.3 342 37.4
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 4.0e-43 180.6 653 27.3
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 1.4e-40 172.2 671 26.7
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 4.1e-40 170.6 283 39.6
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 1.2e-39 169.1 323 37.2
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 4.0e-35 154.1 523 31.9
Zm00001eb184290 Zea mays HOM05D006730 ORTHO05D008189 1.2e-31 142.5 433 29.3
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 9.5e-29 132.9 455 27.7
FAN28G2984 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.7e-25 122.1 330 32.4
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 5.4e-24 117.1 430 26.7
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 1.6e-20 105.5 416 27.9
HPP92_022486 Vanilla planifolia HOM05D001064 ORTHO05D000885 2.4e-16 91.7 223 28.3
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 3.5e-15 87.8 347 25.6
PSO063G4508 Papaver somniferum HOM05D006730 ORTHO05D008189 6.2e-12 77.0 332 25.6
Actinidia26680 Actinidia chinensis HOM05D006730 ORTHO05D008189 8.0e-12 76.6 137 38.7
Ah.10g027090 Amaranthus hybridus HOM05D006730 ORTHO05D008189 5.8e-10 70.5 136 36.8
Gohir.A02G010550 Gossypium hirsutum HOM05D006730 ORTHO05D008189 5.0e-06 57.4 82 34.1


User provided reference genes

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