Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g208600 Pisum sativum HOM05D008235 ORTHO05D009358 1.2e-169 599.7 300 100.0
Ca_20789_v3 Cicer arietinum L. HOM05D008235 ORTHO05D009358 7.2e-90 334.7 403 52.4
Medtr4g067260 Medicago truncatula HOM05D008235 ORTHO05D009358 8.2e-78 294.7 419 47.7
TPR.G34237 Trifolium pratense HOM05D008235 ORTHO05D009358 1.2e-76 290.8 328 55.8
Glyma.11G127600 Glycine max HOM05D008235 ORTHO05D009358 1.4e-61 240.7 389 43.7
Glyma.12G052200 Glycine max HOM05D008235 ORTHO05D009358 1.2e-60 237.7 392 43.1
Lj3g0014084 Lotus japonicus HOM05D008235 ORTHO05D009358 1.2e-52 211.1 424 38.9
VMungo1127G1046 Vigna mungo HOM05D008235 ORTHO05D009358 3.5e-52 209.5 401 39.4
Phvul.011G054200 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 6.6e-51 205.3 402 38.8
Lalb_Chr22g0352131 Lupinus albus HOM05D008235 ORTHO05D009358 1.1e-50 204.5 398 39.9
arahy.Tifrunner.gnm1.ann1.TK6P88 Arachis hypogaea HOM05D008235 ORTHO05D009358 3.7e-46 189.5 406 37.7
arahy.Tifrunner.gnm1.ann1.V6VI7P Arachis hypogaea HOM05D008235 ORTHO05D009358 3.7e-46 189.5 406 37.7
Phvul.005G153000 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 2.0e-23 114.0 310 32.6
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 3.8e-22 109.8 399 29.6
Glyma.13G344300 Glycine max HOM05D008235 ORTHO05D009358 6.4e-22 109.0 162 44.4
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 3.2e-21 106.7 389 29.3
MD04G1040900 Malus domestica HOM05D008235 ORTHO05D009358 3.0e-19 100.1 368 28.5
TAR636G0036 Trochodendron aralioides HOM05D008235 ORTHO05D009358 1.4e-13 81.3 107 42.1
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 5.4e-13 79.3 159 36.5
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 1.2e-12 78.2 364 25.5
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 2.7e-12 77.0 237 28.3
Glyma.15G030050 Glycine max HOM05D008235 ORTHO05D009358 4.6e-12 76.3 123 47.2
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 4.6e-12 76.3 107 41.1
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 2.5e-10 70.5 187 32.1
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 4.3e-10 69.7 103 39.8
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 9.6e-10 68.6 72 50.0
COL.COLO4_07668 Corchorus olitorius HOM05D008235 ORTHO05D009358 9.6e-10 68.6 172 32.0
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 1.6e-09 67.8 387 25.1
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 4.8e-09 66.2 168 28.0
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 8.1e-09 65.5 366 26.0
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 8.1e-09 65.5 116 38.8
Actinidia34601 Actinidia chinensis HOM05D008235 ORTHO05D009358 1.4e-08 64.7 118 38.1
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 3.1e-08 63.5 97 39.2
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 1.5e-07 61.2 208 28.8
GSVIVG01010760001 Vitis vinifera HOM05D008235 ORTHO05D009358 1.5e-07 61.2 96 40.6
Sed0015774 Sechium edule HOM05D008235 ORTHO05D009358 2.0e-07 60.8 80 40.0
Nn1g09629 Nelumbo nucifera HOM05D008235 ORTHO05D009358 2.6e-07 60.5 83 43.4
Actinidia35979 Actinidia chinensis HOM05D008235 ORTHO05D009358 3.4e-07 60.1 105 39.0
ClCG07G015680 Citrullus lanatus HOM05D008235 ORTHO05D009358 3.4e-07 60.1 98 36.7
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 3.4e-07 60.1 90 37.8
CsaV3_4G003430 Cucumis sativus L. HOM05D008235 ORTHO05D009358 4.5e-07 59.7 98 34.7
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 7.6e-07 58.9 86 38.4
MELO3C017713.2 Cucumis melo HOM05D008235 ORTHO05D009358 9.9e-07 58.5 72 40.3
Peaxi162Scf01052g00325 Petunia axillaris HOM05D014650 ORTHO05D009358 1.3e-06 58.2 142 32.4
vmacro00622 Vaccinium macrocarpon HOM05D008235 ORTHO05D009358 1.3e-06 58.2 167 30.5
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 2.2e-06 57.4 184 31.5
RhsimUnG0195000 Rhododendron simsii HOM05D008235 ORTHO05D009358 2.2e-06 57.4 184 31.5
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 3.8e-06 56.6 82 37.8
CSS0049607 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 3.8e-06 56.6 82 37.8
Nitab4.5_0002598g0040 Nicotiana tabacum HOM05D014650 ORTHO05D009358 3.8e-06 56.6 191 30.9
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 4.9e-06 56.2 72 41.7
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 4.9e-06 56.2 72 41.7
Manes.11G121000 Manihot esculenta HOM05D008235 ORTHO05D009358 8.4e-06 55.5 52 50.0


User provided reference genes

Program Settings