Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g121640 Pisum sativum HOM05D004910 ORTHO05D030483 2.3e-63 245.4 120 100.0
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 4.8e-45 184.5 114 83.3
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 7.9e-40 167.2 114 73.7
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 3.9e-39 164.9 114 76.3
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 3.6e-32 141.7 114 61.4
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 3.0e-31 138.7 114 60.5
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 3.3e-30 135.2 114 67.5
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 8.2e-29 130.6 114 57.9
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 2.5e-25 119.0 114 56.1
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 1.2e-24 116.7 114 56.1
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 2.6e-22 109.0 111 55.9
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 4.4e-22 108.2 108 52.8
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 4.4e-22 108.2 108 52.8
Psat6g100000 Pisum sativum HOM05D004910 ORTHO05D030483 2.0e-19 99.4 113 49.6
Psat0s999g0120 Pisum sativum HOM05D004910 ORTHO05D030483 3.8e-18 95.1 51 88.2
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 1.0e-15 87.0 117 43.6
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 2.3e-15 85.9 106 44.3
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 7.5e-14 80.9 114 46.5
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 1.7e-13 79.7 114 39.5
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 1.2e-11 73.6 112 43.8
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 3.5e-11 72.0 114 37.7
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 4.5e-11 71.6 114 36.8
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 7.7e-11 70.9 112 39.3
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 5.0e-10 68.2 108 38.0
Psat0s2415g0080 Pisum sativum HOM05D036449 ORTHO05D327484 8.6e-10 67.4 33 97.0
Psat0s4644g0040 Pisum sativum HOM05D063655 ORTHO05D030483 8.6e-10 67.4 33 97.0
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.1e-09 67.0 103 35.9
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 1.1e-09 67.0 111 40.5
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 1.5e-09 66.6 108 37.0
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 5.5e-09 64.7 113 43.4
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 7.2e-09 64.3 113 42.5
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 7.2e-09 64.3 115 35.7
Psat0s2416g0040 Pisum sativum HOM05D063655 ORTHO05D328616 7.2e-09 64.3 33 93.9
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 1.2e-08 63.5 113 43.4
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.2e-08 63.5 113 43.4
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 2.1e-08 62.8 110 34.5
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 4.7e-08 61.6 115 36.5
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.0e-07 60.5 113 42.5
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 5.2e-07 58.2 107 36.4
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 6.8e-07 57.8 109 32.1
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 8.9e-07 57.4 107 33.6
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.0e-06 56.2 103 34.0
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 4.4e-06 55.1 105 38.1
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 5.7e-06 54.7 108 33.3


User provided reference genes

Program Settings