Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.3e-57 226.1 107 100.0
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 9.2e-56 219.9 107 97.2
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 5.4e-48 194.1 107 86.0
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 4.6e-47 191.0 107 84.1
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 6.8e-43 177.2 108 76.9
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 1.5e-42 176.0 108 76.9
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 1.2e-39 166.4 108 74.1
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 6.0e-39 164.1 104 76.0
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.3e-38 162.9 109 74.3
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 5.6e-37 157.5 107 69.2
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 7.3e-37 157.1 99 71.7
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 6.2e-36 154.1 107 70.1
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.1e-35 153.3 107 68.2
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 1.1e-35 153.3 103 68.9
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.8e-35 152.5 106 67.0
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 1.8e-35 152.5 107 68.2
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 2.4e-35 152.1 102 67.6
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 2.4e-35 152.1 107 68.2
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 3.1e-35 151.8 107 66.4
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 4.0e-35 151.4 103 68.9
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 4.0e-35 151.4 107 65.4
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 9.0e-35 150.2 106 67.9
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 9.0e-35 150.2 106 67.0
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 9.0e-35 150.2 106 67.0
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.2e-34 149.8 107 68.2
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 1.5e-34 149.4 103 68.9
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 2.0e-34 149.1 104 64.4
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 3.4e-34 148.3 103 68.0
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 3.4e-34 148.3 107 66.4
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 3.4e-34 148.3 104 68.3
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 3.4e-34 148.3 107 66.4
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 4.4e-34 147.9 107 65.4
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 4.4e-34 147.9 107 62.6
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.4e-34 147.9 106 66.0
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.4e-34 147.9 96 68.8
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 4.4e-34 147.9 104 67.3
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 7.6e-34 147.1 107 67.3
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 7.6e-34 147.1 105 64.8
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 7.6e-34 147.1 107 65.4
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 7.6e-34 147.1 107 67.3
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 1.3e-33 146.4 107 63.6
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.3e-33 146.4 106 65.1
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 1.7e-33 146.0 107 61.7
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 2.2e-33 145.6 104 65.4
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 2.9e-33 145.2 104 61.5
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 3.8e-33 144.8 111 63.1
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 4.9e-33 144.4 103 66.0
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.4e-33 144.1 106 65.1
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 8.4e-33 143.7 107 64.5
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 1.1e-32 143.3 102 67.6
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 1.4e-32 142.9 103 63.1
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 1.4e-32 142.9 107 64.5
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.9e-32 142.5 104 66.3
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.2e-32 141.4 110 63.6
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 4.2e-32 141.4 108 62.0
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 7.1e-32 140.6 106 61.3
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 7.1e-32 140.6 103 60.2
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.1e-31 139.0 106 63.2
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 2.7e-31 138.7 109 62.4
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 7.8e-31 137.1 104 62.5
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.0e-30 136.7 88 69.3
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 1.3e-30 136.3 98 64.3
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.7e-30 136.0 110 62.7
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 1.7e-30 136.0 107 59.8
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 1.7e-30 136.0 127 56.7
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.7e-30 136.0 106 59.4
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.7e-30 136.0 106 59.4
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 1.7e-30 136.0 105 61.9
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 6.6e-30 134.0 100 61.0
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.9e-29 132.5 88 68.2
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 3.3e-29 131.7 107 60.7
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.6e-29 131.0 92 63.0
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 9.6e-29 130.2 77 75.3
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.3e-28 129.8 107 59.8
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 1.6e-28 129.4 173 41.6
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 2.4e-27 125.6 141 45.4
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 6.9e-27 124.0 107 56.1
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 9.0e-27 123.6 114 57.0
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.5e-26 122.9 88 61.4
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 1.5e-26 122.9 98 58.2
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 2.6e-26 122.1 107 55.1
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 9.9e-26 120.2 108 52.8
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 1.3e-25 119.8 107 56.1
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 1.3e-25 119.8 107 54.2
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 1.3e-25 119.8 94 59.6
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.7e-25 119.4 107 54.2
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 1.7e-25 119.4 107 56.1
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 4.9e-25 117.9 102 49.0
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.1e-24 116.7 78 66.7
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 1.4e-24 116.3 107 52.3
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.4e-24 116.3 78 66.7
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.9e-24 115.9 107 54.2
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.9e-24 115.9 78 66.7
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 3.2e-24 115.2 107 51.4
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 3.2e-24 115.2 78 66.7
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 4.2e-24 114.8 74 66.2
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 5.4e-24 114.4 98 46.9
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 5.4e-24 114.4 74 67.6
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 7.1e-24 114.0 124 48.4
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 7.1e-24 114.0 78 69.2
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 7.1e-24 114.0 93 50.5
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 9.3e-24 113.6 73 68.5
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.6e-23 112.8 78 65.4
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 2.1e-23 112.5 67 76.1
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 2.1e-23 112.5 124 47.6
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 2.1e-23 112.5 124 47.6
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 1.0e-22 110.2 129 45.7
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 1.3e-22 109.8 124 46.0
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 3.0e-22 108.6 126 46.8
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 5.1e-22 107.8 74 66.2
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 4.3e-21 104.8 71 71.8
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 5.6e-21 104.4 124 44.4
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 1.3e-20 103.2 69 63.8
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 1.6e-20 102.8 67 73.1
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.8e-20 102.1 70 62.9
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 8.1e-20 100.5 69 66.7
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 3.1e-19 98.6 73 60.3
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 6.9e-19 97.4 73 63.0
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 6.0e-15 84.3 51 78.4
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 1.0e-14 83.6 78 48.7
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.3e-14 82.4 74 54.1
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 8.7e-14 80.5 124 38.7
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 4.3e-13 78.2 87 36.8
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 1.1e-11 73.6 40 77.5
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 4.0e-11 71.6 59 55.9
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 2.2e-09 65.9 96 35.4


User provided reference genes

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