Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 1.7e-57 225.7 107 100.0
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 9.2e-56 219.9 107 97.2
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 9.9e-50 199.9 107 88.8
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 2.4e-48 195.3 107 86.0
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 1.1e-43 179.9 108 78.7
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 1.4e-43 179.5 108 77.8
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 3.8e-41 171.4 108 75.9
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 5.4e-40 167.5 104 76.9
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.2e-39 166.4 109 75.2
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 6.6e-38 160.6 99 72.7
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.9e-37 159.1 107 72.9
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 1.9e-37 159.1 107 69.2
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 7.3e-37 157.1 107 70.1
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 9.6e-37 156.8 102 69.6
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 9.6e-37 156.8 103 69.9
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 2.1e-36 155.6 107 68.2
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 2.8e-36 155.2 107 67.3
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 2.8e-36 155.2 107 69.2
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 3.6e-36 154.8 103 69.9
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 6.2e-36 154.1 107 68.2
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.1e-35 153.3 106 68.9
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-35 153.3 106 67.9
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.1e-35 153.3 106 67.9
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.4e-35 152.9 107 69.2
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 1.4e-35 152.9 103 69.9
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 1.4e-35 152.9 104 66.3
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.8e-35 152.5 96 70.8
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 3.1e-35 151.8 107 64.5
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 3.1e-35 151.8 107 67.3
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 4.0e-35 151.4 103 69.9
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 4.0e-35 151.4 104 69.2
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 5.2e-35 151.0 107 66.4
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.2e-35 151.0 106 67.0
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 5.2e-35 151.0 104 68.3
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 6.9e-35 150.6 106 66.0
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 6.9e-35 150.6 105 65.7
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 9.0e-35 150.2 107 68.2
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 9.0e-35 150.2 107 65.4
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 9.0e-35 150.2 107 66.4
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 9.0e-35 150.2 107 68.2
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.5e-34 149.4 106 66.0
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 2.0e-34 149.1 107 62.6
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 2.0e-34 149.1 107 66.4
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 2.6e-34 148.7 104 66.3
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 3.4e-34 148.3 111 64.0
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 3.4e-34 148.3 104 62.5
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 5.8e-34 147.5 103 67.0
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 7.6e-34 147.1 107 65.4
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 7.6e-34 147.1 102 69.6
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 7.6e-34 147.1 106 66.0
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.2e-33 145.6 104 67.3
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 2.9e-33 145.2 103 64.1
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 4.9e-33 144.4 103 62.1
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 4.9e-33 144.4 108 63.0
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 6.4e-33 144.1 106 62.3
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 6.4e-33 144.1 107 64.5
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.4e-32 142.1 106 64.2
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 3.2e-32 141.7 109 63.3
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 7.1e-32 140.6 107 61.7
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 7.1e-32 140.6 98 66.3
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.2e-31 139.8 110 64.5
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 1.2e-31 139.8 105 63.8
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.6e-31 139.4 110 62.7
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.6e-31 139.4 106 60.4
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.6e-31 139.4 106 60.4
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 2.1e-31 139.0 127 57.5
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 2.1e-31 139.0 104 62.5
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 7.8e-31 137.1 88 68.2
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 2.3e-30 135.6 100 61.0
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 3.0e-30 135.2 107 61.7
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 6.6e-30 134.0 107 61.7
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.5e-29 132.9 88 67.0
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.9e-29 132.5 92 63.0
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 1.9e-29 132.5 173 42.2
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 2.5e-29 132.1 77 76.6
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 2.1e-28 129.0 141 46.1
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.8e-28 128.6 114 59.6
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 8.1e-28 127.1 107 57.0
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 1.8e-27 125.9 107 57.0
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 4.0e-27 124.8 107 56.1
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 9.0e-27 123.6 107 57.9
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 9.0e-27 123.6 98 58.2
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.2e-26 123.2 107 56.1
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 1.2e-26 123.2 107 57.9
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 2.6e-26 122.1 108 53.7
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 5.8e-26 120.9 107 56.1
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 7.6e-26 120.6 88 60.2
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 7.6e-26 120.6 102 50.0
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 9.9e-26 120.2 107 54.2
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 1.3e-25 119.8 107 53.3
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 2.2e-25 119.0 94 59.6
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 4.9e-25 117.9 124 50.0
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 6.4e-25 117.5 78 66.7
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.1e-24 116.7 106 54.7
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.1e-24 116.7 107 53.3
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 1.4e-24 116.3 124 49.2
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 1.4e-24 116.3 124 49.2
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 1.4e-24 116.3 74 66.2
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.4e-24 116.3 78 66.7
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.9e-24 115.9 74 67.6
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 2.4e-24 115.5 98 46.9
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 2.4e-24 115.5 93 50.5
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 3.2e-24 115.2 78 69.2
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.2e-24 114.8 73 68.5
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 7.1e-24 114.0 78 65.4
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 9.3e-24 113.6 67 76.1
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 9.3e-24 113.6 124 47.6
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 1.2e-23 113.2 129 46.5
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 2.1e-23 112.5 126 48.4
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 1.8e-22 109.4 74 66.2
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 3.9e-22 108.2 124 46.0
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 5.1e-22 107.8 71 74.6
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 3.3e-21 105.1 69 65.2
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 5.6e-21 104.4 70 64.3
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 9.6e-21 103.6 78 65.4
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 8.1e-20 100.5 73 60.3
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 1.1e-19 100.1 69 65.2
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 1.4e-19 99.8 73 64.4
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 1.6e-15 86.3 51 80.4
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 2.1e-15 85.9 78 50.0
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 6.0e-15 84.3 124 40.3
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 1.0e-14 83.6 74 54.1
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 6.7e-14 80.9 87 37.9
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 2.4e-11 72.4 40 75.0
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 6.9e-11 70.9 59 54.2
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 1.7e-09 66.2 96 34.4


User provided reference genes

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