Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g105040 Pisum sativum HOM05D001690 ORTHO05D002627 2.1e-42 175.3 86 100.0
Psat7g105080 Pisum sativum HOM05D001690 ORTHO05D002627 9.4e-27 123.2 62 95.2
TPR.G2319 Trifolium pratense HOM05D001690 ORTHO05D002627 2.9e-12 75.1 62 56.5
Ca_03698_v3 Cicer arietinum L. HOM05D001690 ORTHO05D002627 9.5e-11 70.1 58 58.6
Ca_03703_v3 Cicer arietinum L. HOM05D001690 ORTHO05D002627 9.5e-11 70.1 58 58.6
Lalb_Chr02g0159771 Lupinus albus HOM05D001690 ORTHO05D002627 2.1e-10 68.9 59 54.2
Lj2g0005228 Lotus japonicus HOM05D001690 ORTHO05D002627 2.3e-09 65.5 60 55.0
GSVIVG01032526001 Vitis vinifera HOM05D001690 ORTHO05D002627 2.3e-09 65.5 60 48.3
CSS0043491 Camellia sinensis var. sinensis HOM05D001690 ORTHO05D002627 6.8e-09 63.9 59 45.8
MD17G1039000 Malus domestica HOM05D001690 ORTHO05D002627 6.8e-09 63.9 59 50.8
PGR083G2406 Punica granatum HOM05D001690 ORTHO05D002627 6.8e-09 63.9 57 50.9
Psat4g042240 Pisum sativum HOM05D001690 ORTHO05D002627 1.2e-08 63.2 62 51.6
QL02p077697 Quercus lobata HOM05D001690 ORTHO05D002627 1.2e-08 63.2 59 49.2
AT3G01410 Arabidopsis thaliana HOM05D001690 ORTHO05D002627 1.5e-08 62.8 57 50.9
Duzib268G0426 Durio zibethinus HOM05D001690 ORTHO05D002627 2.0e-08 62.4 59 50.8
Psat1g063040 Pisum sativum HOM05D001690 ORTHO05D002627 2.0e-08 62.4 60 50.0
TPR.G2321 Trifolium pratense HOM05D001690 ORTHO05D002627 2.0e-08 62.4 59 50.8
Atru.chr8.2425 Acer truncatum HOM05D001690 ORTHO05D002627 3.4e-08 61.6 58 46.6
Cc07_g02530 Coffea canephora HOM05D001690 ORTHO05D002627 3.4e-08 61.6 60 48.3
BolC1t05954H Brassica oleracea HOM05D001690 ORTHO05D002627 4.4e-08 61.2 58 46.6
Ciclev10012229m.g Citrus clementina HOM05D001690 ORTHO05D002627 4.4e-08 61.2 59 50.8
MD09G1038000 Malus domestica HOM05D001690 ORTHO05D002627 4.4e-08 61.2 59 49.2
BcaC09g47664 Brassica carinata HOM05D001690 ORTHO05D002627 5.7e-08 60.8 58 46.6
BNapus_Darmor_BZH_scaffold_133p00060 Brassica napus HOM05D001690 ORTHO05D002627 5.7e-08 60.8 58 46.6
BraA01t04662Z Brassica rapa HOM05D001690 ORTHO05D002627 5.7e-08 60.8 58 46.6
Psat7g022400 Pisum sativum HOM05D001690 ORTHO05D002627 5.7e-08 60.8 60 50.0
Prupe.3G280000 Prunus persica HOM05D001690 ORTHO05D002627 5.7e-08 60.8 59 52.5
Prupe.1G259600 Prunus persica HOM05D001690 ORTHO05D002627 7.5e-08 60.5 59 44.1
BcaB04g21416 Brassica carinata HOM05D001690 ORTHO05D002627 9.8e-08 60.1 54 48.1
Eucgr.J02177 Eucalyptus grandis HOM05D001690 ORTHO05D002627 1.3e-07 59.7 59 47.5
Actinidia33972 Actinidia chinensis HOM05D001690 ORTHO05D002627 1.7e-07 59.3 59 44.1
A03p32550 Brassica napus HOM05D001690 ORTHO05D002627 1.7e-07 59.3 58 48.3
TPR.G15420 Trifolium pratense HOM05D001690 ORTHO05D002627 1.7e-07 59.3 60 45.0
MD16G1087400 Malus domestica HOM05D001690 ORTHO05D002627 2.2e-07 58.9 59 44.1
THA.LOC104824673 Tarenaya hassleriana HOM05D001690 ORTHO05D002627 2.2e-07 58.9 59 50.8
C03p39630 Brassica napus HOM05D001690 ORTHO05D002627 2.8e-07 58.5 58 46.6
CDE02G3381 Ceratophyllum demersum HOM05D001690 ORTHO05D002627 2.8e-07 58.5 59 45.8
Sed0027377 Sechium edule HOM05D001690 ORTHO05D002627 2.8e-07 58.5 58 43.1
BraA03t12424Z Brassica rapa HOM05D001690 ORTHO05D002627 3.7e-07 58.2 58 46.6
Lalb_Chr05g0228001 Lupinus albus HOM05D001690 ORTHO05D002627 3.7e-07 58.2 58 48.3
Rhsim08G0061200 Rhododendron simsii HOM05D001690 ORTHO05D002627 3.7e-07 58.2 59 44.1
Sp3g00650 Schrenkiella parvula HOM05D001690 ORTHO05D002627 3.7e-07 58.2 54 48.1
TAR371G0464 Trochodendron aralioides HOM05D001690 ORTHO05D002627 3.7e-07 58.2 59 47.5
MSTRG.618 Avicennia marina HOM05D001690 ORTHO05D002627 4.9e-07 57.8 59 45.8
Eucgr.I01834 Eucalyptus grandis HOM05D001690 ORTHO05D002627 4.9e-07 57.8 61 47.5
Sed0007819 Sechium edule HOM05D001690 ORTHO05D002627 4.9e-07 57.8 58 43.1
Gorai.009G350100 Gossypium raimondii HOM05D001690 ORTHO05D002627 6.3e-07 57.4 59 39.0
Oeu025444.1 Olea europaea HOM05D001690 ORTHO05D002627 6.3e-07 57.4 59 45.8
Psat7g232920 Pisum sativum HOM05D001690 ORTHO05D002627 6.3e-07 57.4 50 60.0
Rhsim08G0056900 Rhododendron simsii HOM05D001690 ORTHO05D002627 6.3e-07 57.4 59 44.1
RcHm_v2.0_Chr4g0444511 Rosa chinensis HOM05D001690 ORTHO05D002627 6.3e-07 57.4 58 44.8
Sc11g0001360 Simmondsia chinensis HOM05D001690 ORTHO05D002627 6.3e-07 57.4 61 45.9
VMungo0464G2061 Vigna mungo HOM05D001690 ORTHO05D002627 6.3e-07 57.4 48 54.2
A03p28550 Brassica napus HOM05D001690 ORTHO05D002627 8.3e-07 57.0 59 42.4
BraA03t12057Z Brassica rapa HOM05D001690 ORTHO05D002627 8.3e-07 57.0 59 42.4
Hma1.2p1_0375F.1_g139080 Hydrangea macrophylla HOM05D001690 ORTHO05D002627 8.3e-07 57.0 59 44.1
Lj4g0014493 Lotus japonicus HOM05D001690 ORTHO05D002627 8.3e-07 57.0 58 48.3
PSO063G4956 Papaver somniferum HOM05D001690 ORTHO05D002627 8.3e-07 57.0 59 45.8
PSO832G0532 Papaver somniferum HOM05D001690 ORTHO05D002627 8.3e-07 57.0 59 45.8
EL10Ac2g03377 Beta vulgaris HOM05D001690 ORTHO05D002627 1.1e-06 56.6 57 45.6
CANSAT78G0546 Cannabis sativa HOM05D001690 ORTHO05D002627 1.1e-06 56.6 59 42.4
MELO3C002906.2 Cucumis melo HOM05D001690 ORTHO05D002627 1.1e-06 56.6 58 39.7
DCAR_013958 Daucus carota HOM05D001690 ORTHO05D002627 1.1e-06 56.6 59 42.4
Thhalv10021278m.g Eutrema salsugineum HOM05D001690 ORTHO05D002627 1.1e-06 56.6 54 44.4
Oeu012249.2 Olea europaea HOM05D001690 ORTHO05D002627 1.1e-06 56.6 59 42.4
Phvul.003G055000 Phaseolus vulgaris HOM05D001690 ORTHO05D002627 1.1e-06 56.6 60 46.7
arahy.Tifrunner.gnm1.ann1.AP71DE Arachis hypogaea HOM05D001690 ORTHO05D002627 1.4e-06 56.2 58 46.6
arahy.Tifrunner.gnm1.ann1.REN86K Arachis hypogaea HOM05D001690 ORTHO05D002627 1.4e-06 56.2 58 48.3
arahy.Tifrunner.gnm1.ann1.XWU7PI Arachis hypogaea HOM05D001690 ORTHO05D002627 1.4e-06 56.2 58 48.3
HanXRQChr09g0266021 Helianthus annuus HOM05D001690 ORTHO05D002627 1.4e-06 56.2 58 44.8
QL03p062472 Quercus lobata HOM05D001690 ORTHO05D002627 1.4e-06 56.2 59 42.4
HanXRQChr12g0385551 Helianthus annuus HOM05D001690 ORTHO05D002627 1.8e-06 55.8 58 44.8
Lsat_1_v5_gn_8_160200 Lactuca sativa HOM05D001690 ORTHO05D002627 1.8e-06 55.8 59 42.4
VMungo0251G3618 Vigna mungo HOM05D001690 ORTHO05D002627 1.8e-06 55.8 58 46.6
Ca_22778_v3 Cicer arietinum L. HOM05D001690 ORTHO05D002627 2.4e-06 55.5 58 46.6
CsaV3_5G025720 Cucumis sativus L. HOM05D001690 ORTHO05D002627 2.4e-06 55.5 58 41.4
Migut.L01443 Erythranthe guttata HOM05D001690 ORTHO05D002627 2.4e-06 55.5 59 44.1
Lsat_1_v5_gn_2_92740 Lactuca sativa HOM05D001690 ORTHO05D002627 2.4e-06 55.5 58 44.8
Aqoxy3G03078 Aquilegia oxysepala HOM05D001690 ORTHO05D002627 3.1e-06 55.1 58 43.1
Cc08_g11240 Coffea canephora HOM05D001690 ORTHO05D002627 3.1e-06 55.1 59 44.1
RcHm_v2.0_Chr2g0170591 Rosa chinensis HOM05D001690 ORTHO05D002627 3.1e-06 55.1 57 45.6
Sed0025692 Sechium edule HOM05D001690 ORTHO05D002627 3.1e-06 55.1 59 45.8
Duzib268G0433 Durio zibethinus HOM05D001690 ORTHO05D002627 4.1e-06 54.7 51 49.0
Oeu031634.1 Olea europaea HOM05D001690 ORTHO05D002627 4.1e-06 54.7 59 44.1
THA.LOC104821068 Tarenaya hassleriana HOM05D001690 ORTHO05D002627 4.1e-06 54.7 61 41.0
FvH4_2g39271 Fragaria vesca HOM05D001690 ORTHO05D002627 5.4e-06 54.3 59 44.1
FvH4_4g34981 Fragaria vesca HOM05D001690 ORTHO05D002627 5.4e-06 54.3 58 43.1
Os10g0458700 Oryza sativa ssp. japonica HOM05D001690 ORTHO05D002627 5.4e-06 54.3 60 43.3
Nn3g16975 Nelumbo nucifera HOM05D001690 ORTHO05D002627 7.0e-06 53.9 57 43.9
Oeu001658.1 Olea europaea HOM05D001690 ORTHO05D002627 7.0e-06 53.9 58 44.8
RcHm_v2.0_Chr6g0301731 Rosa chinensis HOM05D001690 ORTHO05D002627 7.0e-06 53.9 59 44.1
MSTRG.7875 Avicennia marina HOM05D001690 ORTHO05D002627 9.2e-06 53.5 59 44.1
AUR62039405 Chenopodium quinoa HOM05D001690 ORTHO05D002627 9.2e-06 53.5 58 43.1
CsaV3_3G042080 Cucumis sativus L. HOM05D001690 ORTHO05D002627 9.2e-06 53.5 59 44.1
ECA232G0267 Erigeron canadensis HOM05D001690 ORTHO05D002627 9.2e-06 53.5 58 43.1
Lsat_1_v5_gn_3_49101 Lactuca sativa HOM05D001690 ORTHO05D002627 9.2e-06 53.5 60 38.3
Lsat_1_v5_gn_4_181900 Lactuca sativa HOM05D001690 ORTHO05D002627 9.2e-06 53.5 58 43.1
RcHm_v2.0_Chr6g0245201 Rosa chinensis HOM05D001690 ORTHO05D002627 9.2e-06 53.5 59 44.1


User provided reference genes

Program Settings