Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 3.3e-133 478.4 243 100.0
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 1.4e-112 409.8 243 85.6
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 8.9e-107 390.6 268 80.2
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 6.4e-105 384.4 208 93.3
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 1.5e-93 346.7 249 76.7
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 1.5e-93 346.7 251 75.7
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 8.1e-92 340.9 249 73.1
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 1.5e-90 336.7 248 73.0
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 4.5e-90 335.1 247 74.1
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 1.0e-86 323.9 249 73.1
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 4.3e-85 318.5 250 70.8
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 1.1e-83 313.9 251 70.9
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 5.3e-75 285.0 245 64.5
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 7.6e-74 281.2 247 61.9
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 7.6e-74 281.2 252 61.9
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 1.0e-73 280.8 248 65.3
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 1.3e-73 280.4 262 62.2
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 2.9e-73 279.3 250 65.2
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 2.9e-73 279.3 247 63.6
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.4e-72 276.9 248 64.1
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 2.5e-72 276.2 247 64.0
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 3.2e-72 275.8 251 64.5
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 6.1e-71 271.6 262 61.5
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 7.9e-71 271.2 250 63.6
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 1.8e-70 270.0 247 62.8
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 1.1e-69 267.3 255 61.2
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.5e-69 266.2 249 63.1
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 2.5e-69 266.2 249 63.1
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 7.4e-69 264.6 269 56.9
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 1.4e-67 260.4 250 63.2
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 1.8e-67 260.0 250 63.2
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 3.1e-67 259.2 258 61.2
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 3.1e-67 259.2 254 61.0
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 4.1e-67 258.8 249 61.0
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 5.3e-67 258.5 206 69.4
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.2e-66 257.3 255 61.6
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 2.9e-65 252.7 246 60.2
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 6.5e-65 251.5 256 60.2
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 8.5e-65 251.1 250 59.2
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 2.5e-64 249.6 253 58.1
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 3.2e-64 249.2 245 61.6
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 4.2e-64 248.8 254 58.7
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 5.5e-64 248.4 252 59.5
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 1.6e-63 246.9 250 60.0
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 2.7e-63 246.1 246 60.2
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 3.6e-63 245.7 244 58.2
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 3.6e-63 245.7 252 60.3
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 4.6e-63 245.4 255 59.6
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.0e-62 244.2 202 66.8
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 1.0e-62 244.2 246 59.3
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 3.9e-62 242.3 250 58.8
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 1.1e-61 240.7 258 58.5
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 1.5e-61 240.4 255 59.6
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 3.3e-61 239.2 246 57.7
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 3.3e-61 239.2 247 58.3
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 3.3e-61 239.2 254 56.7
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 3.3e-61 239.2 276 56.5
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 9.7e-61 237.7 246 57.3
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 2.8e-60 236.1 257 56.4
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 2.8e-60 236.1 252 56.3
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 4.8e-60 235.3 246 58.1
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 4.8e-60 235.3 247 57.9
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.4e-59 233.8 247 57.9
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 1.8e-59 233.4 254 58.3
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 4.1e-59 232.3 245 58.4
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 9.1e-59 231.1 257 56.0
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.2e-58 230.7 246 56.5
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 7.7e-58 228.0 253 54.2
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 1.0e-57 227.6 246 56.1
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 1.0e-57 227.6 248 54.0
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 1.3e-57 227.3 246 56.9
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 1.3e-57 227.3 246 57.3
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 2.9e-57 226.1 265 52.8
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 2.9e-57 226.1 303 50.5
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 5.0e-57 225.3 246 56.5
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 6.5e-57 224.9 246 56.5
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 6.5e-57 224.9 248 54.0
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 8.5e-57 224.6 182 68.1
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 4.2e-56 222.2 257 54.5
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 9.4e-56 221.1 200 62.0
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 9.4e-56 221.1 250 56.4
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 1.6e-55 220.3 279 50.5
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 1.6e-55 220.3 191 61.8
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 2.7e-55 219.5 250 54.8
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 6.1e-55 218.4 262 54.2
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 6.1e-55 218.4 242 54.5
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 3.0e-54 216.1 253 53.8
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 6.7e-54 214.9 260 55.0
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 7.4e-53 211.5 237 54.9
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 1.3e-52 210.7 229 55.0
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 2.2e-52 209.9 228 53.5
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 2.8e-52 209.5 252 52.8
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 6.3e-52 208.4 245 55.5
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 8.2e-52 208.0 231 54.1
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 8.2e-52 208.0 248 52.8
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 4.1e-51 205.7 230 52.6
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 5.3e-51 205.3 230 52.6
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 5.9e-50 201.8 238 52.9
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 9.4e-48 194.5 215 54.9
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 2.7e-47 193.0 257 51.0
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.0e-47 191.4 133 75.2
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.8e-46 190.3 245 50.6
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.3e-46 189.9 245 50.6
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 3.9e-46 189.1 233 49.8
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 5.2e-46 188.7 135 73.3
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 8.8e-46 188.0 136 73.5
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 9.7e-45 184.5 138 72.5
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.3e-44 184.1 244 49.6
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.8e-44 183.0 138 71.7
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 2.0e-42 176.8 254 49.2
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 3.6e-39 166.0 260 45.4
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 4.0e-38 162.5 260 44.6
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 8.8e-38 161.4 264 43.2
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.3e-36 157.5 121 71.1
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 4.1e-35 152.5 245 44.5
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 5.9e-34 148.7 134 61.2
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 9.4e-32 141.4 178 52.8
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.6e-31 140.6 260 43.5
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 3.6e-31 139.4 182 49.5
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 3.4e-29 132.9 177 49.2
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 4.1e-27 125.9 73 84.9
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 8.6e-25 118.2 180 46.1
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 2.3e-22 110.2 74 78.4
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 4.4e-21 105.9 154 46.8
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.3e-20 104.4 181 40.9
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 1.7e-17 94.0 139 47.5
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 2.9e-17 93.2 220 35.9
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 3.7e-12 76.3 75 58.7
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 3.2e-11 73.2 134 41.0
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 5.4e-11 72.4 97 49.5
Potri.001G206032 Populus trichocarpa HOM05D005104 ORTHO05D006614 1.3e-09 67.8 56 64.3
A10p06060 Brassica napus HOM05D005104 ORTHO05D006614 2.8e-07 60.1 84 47.6
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 8.0e-07 58.5 235 30.6
C07p45690 Brassica napus HOM05D005104 ORTHO05D021970 1.4e-06 57.8 110 38.2


User provided reference genes

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