Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g080520 Pisum sativum HOM05D000625 ORTHO05D000467 1.3e-211 739.6 400 100.0
Medtr8g079472 Medicago truncatula HOM05D000625 ORTHO05D000467 3.5e-148 528.9 398 74.9
Ca_18161_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 7.5e-143 511.1 396 69.4
TPR.G9564 Trifolium pratense HOM05D000625 ORTHO05D000467 3.5e-132 475.7 360 75.0
Glyma.08G099600 Glycine max HOM05D000625 ORTHO05D000467 4.1e-117 425.6 407 60.4
Glyma.05G143200 Glycine max HOM05D000625 ORTHO05D000467 6.6e-115 418.3 407 61.7
Lj4g0003152 Lotus japonicus HOM05D000625 ORTHO05D000467 1.6e-113 413.7 404 59.7
Glyma.08G231500 Glycine max HOM05D000625 ORTHO05D000467 3.6e-113 412.5 395 62.8
Phvul.002G178100 Phaseolus vulgaris HOM05D000625 ORTHO05D000467 4.4e-111 405.6 411 58.4
VMungo0251G1602 Vigna mungo HOM05D000625 ORTHO05D000467 1.6e-108 397.1 409 56.0
VMungo1309G1421 Vigna mungo HOM05D000625 ORTHO05D000467 1.2e-103 380.9 410 54.9
arahy.Tifrunner.gnm1.ann1.FF7LJT Arachis hypogaea HOM05D000625 ORTHO05D000467 9.9e-103 377.9 407 59.0
arahy.Tifrunner.gnm1.ann1.RJ5V20 Arachis hypogaea HOM05D000625 ORTHO05D000467 9.9e-103 377.9 407 59.0
arahy.Tifrunner.gnm1.ann1.J3VXKJ Arachis hypogaea HOM05D000625 ORTHO05D000467 1.3e-102 377.5 407 59.0
Glyma.09G089500 Glycine max HOM05D000625 ORTHO05D000467 2.9e-102 376.3 400 56.0
Glyma.15G197100 Glycine max HOM05D000625 ORTHO05D000467 1.9e-101 373.6 414 54.1
Lj6g0026443 Lotus japonicus HOM05D000625 ORTHO05D000467 4.6e-100 369.0 397 53.1
Phvul.009G213200 Phaseolus vulgaris HOM05D000625 ORTHO05D000467 1.1e-96 357.8 410 52.4
Lalb_Chr07g0187501 Lupinus albus HOM05D000625 ORTHO05D000467 1.5e-95 354.0 407 52.3
arahy.Tifrunner.gnm1.ann1.G0QL0C Arachis hypogaea HOM05D000625 ORTHO05D000467 7.3e-90 335.1 405 49.1
Lalb_Chr23g0275921 Lupinus albus HOM05D000625 ORTHO05D000467 2.1e-89 333.6 391 52.2
Medtr2g049770 Medicago truncatula HOM05D000625 ORTHO05D000467 1.7e-86 323.9 410 48.0
Psat1g020720 Pisum sativum HOM05D000625 ORTHO05D000467 1.7e-86 323.9 406 49.5
TPR.G31226 Trifolium pratense HOM05D000625 ORTHO05D000467 1.3e-83 314.3 410 46.8
arahy.Tifrunner.gnm1.ann1.W5QJNA Arachis hypogaea HOM05D000625 ORTHO05D000467 2.3e-83 313.5 396 47.7
Cfa000902 Carpinus fangiana HOM05D000625 ORTHO05D000467 5.8e-79 298.9 408 47.1
Haze_05659 Corylus avellana HOM05D000625 ORTHO05D000467 1.9e-77 293.9 409 47.4
Ca_02598_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 6.0e-76 288.9 408 46.1
Thecc.06G144600 Theobroma cacao HOM05D000625 ORTHO05D000467 8.4e-70 268.5 414 48.6
Prupe.4G085400 Prunus persica HOM05D000625 ORTHO05D000467 1.4e-69 267.7 444 42.6
Ciclev10015036m.g Citrus clementina HOM05D000625 ORTHO05D000467 4.2e-69 266.2 417 42.9
MD10G1258400 Malus domestica HOM05D000625 ORTHO05D000467 5.1e-67 259.2 436 43.3
QL05p055155 Quercus lobata HOM05D000625 ORTHO05D000467 1.5e-66 257.7 423 44.2
ClCG01G024870 Citrullus lanatus HOM05D000625 ORTHO05D000467 3.3e-66 256.5 408 42.9
MD05G1279900 Malus domestica HOM05D000625 ORTHO05D000467 2.1e-65 253.8 439 45.3
CiPaw.09G119900 Carya illinoinensis HOM05D000625 ORTHO05D000467 3.1e-64 250.0 427 41.7
GSVIVG01021545001 Vitis vinifera HOM05D000625 ORTHO05D000467 2.0e-63 247.3 414 41.3
CsaV3_6G051990 Cucumis sativus L. HOM05D000625 ORTHO05D000467 3.4e-63 246.5 408 41.9
MELO3C007108.2 Cucumis melo HOM05D000625 ORTHO05D000467 4.5e-63 246.1 406 40.4
FAN25G3819 Fragaria x ananassa HOM05D000625 ORTHO05D000467 7.6e-63 245.4 417 45.3
TWI09G0936 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 7.6e-63 245.4 413 42.1
FAN21G0939 Fragaria x ananassa HOM05D000625 ORTHO05D000467 5.0e-62 242.7 423 46.3
FvH4_3g05060 Fragaria vesca HOM05D000625 ORTHO05D000467 1.1e-61 241.5 407 46.4
Dinv32215 Davidia involucrata HOM05D000625 ORTHO05D000467 2.5e-61 240.4 413 44.1
Duzib235G0761 Durio zibethinus HOM05D000625 ORTHO05D000467 1.6e-60 237.7 426 43.9
TAR629G2522 Trochodendron aralioides HOM05D000625 ORTHO05D000467 1.6e-60 237.7 432 41.0
Dinv21525 Davidia involucrata HOM05D000625 ORTHO05D000467 2.1e-60 237.3 432 41.0
Gohir.D05G148800 Gossypium hirsutum HOM05D000625 ORTHO05D000467 7.9e-60 235.3 421 43.5
FAN16G3061 Fragaria x ananassa HOM05D000625 ORTHO05D000467 1.0e-59 235.0 417 43.9
Sed0014179 Sechium edule HOM05D000625 ORTHO05D000467 1.0e-59 235.0 412 41.3
Manes.15G124900 Manihot esculenta HOM05D000625 ORTHO05D000467 1.3e-59 234.6 401 42.9
Gohir.A05G146400 Gossypium hirsutum HOM05D000625 ORTHO05D000467 1.8e-59 234.2 424 43.2
RcHm_v2.0_Chr5g0014901 Rosa chinensis HOM05D000625 ORTHO05D000467 1.8e-59 234.2 394 45.4
FAN11G1753 Fragaria x ananassa HOM05D000625 ORTHO05D000467 1.9e-58 230.7 440 43.2
Gorai.009G152900 Gossypium raimondii HOM05D000625 ORTHO05D000467 1.9e-58 230.7 423 43.3
Manes.17G074100 Manihot esculenta HOM05D000625 ORTHO05D000467 1.9e-58 230.7 400 39.8
Actinidia07465 Actinidia chinensis HOM05D000625 ORTHO05D000467 3.3e-58 229.9 411 41.4
Actinidia13444 Actinidia chinensis HOM05D000625 ORTHO05D000467 3.7e-57 226.5 426 40.6
TWI73G1040 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 1.4e-56 224.6 415 37.8
PGR083G0357 Punica granatum HOM05D000625 ORTHO05D000467 6.9e-56 222.2 403 37.7
Hma1.2p1_0594F.1_g185990 Hydrangea macrophylla HOM05D000625 ORTHO05D000467 2.0e-55 220.7 378 45.2
Duzib192G0574 Durio zibethinus HOM05D000625 ORTHO05D000467 2.6e-55 220.3 425 42.1
TAR704G0001 Trochodendron aralioides HOM05D000625 ORTHO05D000467 3.8e-54 216.5 442 37.3
Potri.011G081500 Populus trichocarpa HOM05D000625 ORTHO05D000467 5.0e-54 216.1 407 41.5
ClCG03G006510 Citrullus lanatus HOM05D000625 ORTHO05D000467 6.5e-54 215.7 398 39.2
Nn3g20338 Nelumbo nucifera HOM05D000625 ORTHO05D000467 4.2e-53 213.0 429 37.5
Sabra04G0085000 Salix brachista HOM05D000625 ORTHO05D000467 6.1e-52 209.1 409 43.3
Duzib160G0084 Durio zibethinus HOM05D000625 ORTHO05D000467 1.0e-51 208.4 364 45.9
Eucgr.D00271 Eucalyptus grandis HOM05D000625 ORTHO05D000467 1.0e-51 208.4 392 38.5
Nn4g26634 Nelumbo nucifera HOM05D000625 ORTHO05D000467 1.0e-51 208.4 432 37.0
Rhsim13G0117200 Rhododendron simsii HOM05D000625 ORTHO05D000467 1.1e-50 204.9 406 38.9
MELO3C002769.2 Cucumis melo HOM05D000625 ORTHO05D000467 2.6e-50 203.8 395 38.7
vmacro03434 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 2.2e-49 200.7 450 37.6
Sed0027919 Sechium edule HOM05D000625 ORTHO05D000467 2.4e-48 197.2 400 38.0
Atru.chr10.1090 Acer truncatum HOM05D000625 ORTHO05D000467 9.1e-48 195.3 348 43.1
Peaxi162Scf00465g00819 Petunia axillaris HOM05D000625 ORTHO05D000467 1.2e-47 194.9 414 37.4
MSTRG.16264 Avicennia marina HOM05D000625 ORTHO05D000467 2.6e-47 193.7 414 36.7
COL.COLO4_31012 Corchorus olitorius HOM05D000625 ORTHO05D000467 2.2e-46 190.7 318 50.3
MSTRG.7510 Avicennia marina HOM05D000625 ORTHO05D000467 3.8e-46 189.9 376 38.8
Sed0010534 Sechium edule HOM05D000625 ORTHO05D000467 3.8e-46 189.9 395 35.7
TAR626G1770 Trochodendron aralioides HOM05D000625 ORTHO05D000467 2.5e-45 187.2 367 37.9
Gohir.A06G196200 Gossypium hirsutum HOM05D000625 ORTHO05D000467 7.2e-45 185.7 401 38.7
Cc03_g08810 Coffea canephora HOM05D000625 ORTHO05D000467 1.1e-42 178.3 405 34.3
Migut.M00882 Erythranthe guttata HOM05D000625 ORTHO05D000467 2.6e-42 177.2 379 40.4
Oeu030961.1 Olea europaea HOM05D000625 ORTHO05D000467 1.3e-41 174.9 409 35.7
Gohir.D06G203700 Gossypium hirsutum HOM05D000625 ORTHO05D000467 2.2e-41 174.1 414 37.7
Aa31LG6G5480 Aethionema arabicum HOM05D000625 ORTHO05D000467 3.7e-41 173.3 392 37.0
Cpa.g.sc17.48 Carica papaya HOM05D000625 ORTHO05D000467 8.2e-41 172.2 403 36.2
SalBow8G3181 Salvia bowleyana HOM05D000625 ORTHO05D000467 1.4e-40 171.4 385 37.7
MBI18_g11222_MAGBIO Magnolia biondii HOM05D000625 ORTHO05D000467 1.8e-40 171.0 403 36.2
ECA236G4706 Erigeron canadensis HOM05D000625 ORTHO05D000467 7.0e-40 169.1 400 36.5
THA.LOC104820660 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 1.0e-38 165.2 378 39.4
Gorai.010G237600 Gossypium raimondii HOM05D000625 ORTHO05D000467 1.3e-38 164.9 412 36.4
Sabra11G0065200 Salix brachista HOM05D000625 ORTHO05D000467 1.7e-38 164.5 321 41.7
HanXRQChr04g0116591 Helianthus annuus HOM05D000625 ORTHO05D000467 2.9e-38 163.7 395 35.9
Carub.0001s2851 Capsella rubella HOM05D000625 ORTHO05D000467 8.5e-38 162.2 407 38.6
DCAR_004817 Daucus carota HOM05D000625 ORTHO05D000467 2.5e-37 160.6 390 37.2
BcaB03g12207 Brassica carinata HOM05D000625 ORTHO05D000467 4.2e-37 159.8 382 34.6
C03p76620 Brassica napus HOM05D000625 ORTHO05D000467 2.3e-35 154.1 379 33.0
MSTRG.14786 Avicennia marina HOM05D000625 ORTHO05D000467 5.2e-35 152.9 381 35.7
Haze_05667 Corylus avellana HOM05D000625 ORTHO05D000467 8.8e-35 152.1 404 33.4
BcaB03g13837 Brassica carinata HOM05D000625 ORTHO05D000467 7.5e-34 149.1 391 35.0
Nitab4.5_0004752g0010 Nicotiana tabacum HOM05D000625 ORTHO05D000467 1.3e-33 148.3 348 33.6
Aqoxy1G01660 Aquilegia oxysepala HOM05D000625 ORTHO05D000467 1.7e-33 147.9 336 38.4
CARHR029670 Cardamine hirsuta HOM05D000625 ORTHO05D000467 2.2e-33 147.5 403 34.0
unitig_37.g12090 Utricularia gibba HOM05D000625 ORTHO05D000467 2.8e-33 147.1 431 35.5
SalBow7G2185 Salvia bowleyana HOM05D000625 ORTHO05D000467 4.8e-33 146.4 377 33.2
Lsat_1_v5_gn_7_27500 Lactuca sativa HOM05D000625 ORTHO05D000467 8.2e-33 145.6 423 35.9
Sp1g26120 Schrenkiella parvula HOM05D000625 ORTHO05D000467 1.4e-32 144.8 403 34.7
SalBow7G4302 Salvia bowleyana HOM05D000625 ORTHO05D000467 4.1e-32 143.3 377 32.9
Nitab4.5_0001930g0030 Nicotiana tabacum HOM05D000625 ORTHO05D000467 1.2e-31 141.7 361 32.1
BraA07t28791Z Brassica rapa HOM05D000625 ORTHO05D000467 1.6e-31 141.4 395 35.2
BcaB07g32627 Brassica carinata HOM05D000625 ORTHO05D000467 2.7e-31 140.6 392 32.1
DCAR_003894 Daucus carota HOM05D000625 ORTHO05D000467 1.0e-30 138.7 373 34.9
A07p09990 Brassica napus HOM05D000625 ORTHO05D000467 1.7e-30 137.9 395 35.2
Thhalv10007605m.g Eutrema salsugineum HOM05D000625 ORTHO05D000467 3.2e-29 133.7 400 33.5
CANSAT35G1452 Cannabis sativa HOM05D000625 ORTHO05D000467 5.5e-29 132.9 460 35.9
AL1G44230 Arabidopsis lyrata HOM05D000625 ORTHO05D000467 3.0e-27 127.1 407 33.9
BcaC01g00181 Brassica carinata HOM05D000625 ORTHO05D000467 3.0e-27 127.1 379 30.1
BolC3t19921H Brassica oleracea HOM05D000625 ORTHO05D000467 3.0e-27 127.1 379 30.1
BraA08t34410Z Brassica rapa HOM05D000625 ORTHO05D000467 5.2e-27 126.3 373 30.3
A08p24540 Brassica napus HOM05D000625 ORTHO05D000467 6.8e-27 125.9 373 30.6
AT1G30280 Arabidopsis thaliana HOM05D000625 ORTHO05D000467 8.8e-27 125.6 403 32.5
CDE05G1731 Ceratophyllum demersum HOM05D000625 ORTHO05D000467 1.2e-26 125.2 418 31.1
BcaC06g35499 Brassica carinata HOM05D000625 ORTHO05D000467 1.5e-26 124.8 389 34.4
C07p15270 Brassica napus HOM05D000625 ORTHO05D000467 2.0e-26 124.4 389 34.2
BolC7t42030H Brassica oleracea HOM05D000625 ORTHO05D000467 4.4e-26 123.2 389 34.2
Sc17g0004800 Simmondsia chinensis HOM05D000625 ORTHO05D000467 4.4e-26 123.2 417 31.7
A09p36210 Brassica napus HOM05D000625 ORTHO05D000467 9.8e-26 122.1 387 30.2
BcaB07g32634 Brassica carinata HOM05D000625 ORTHO05D000467 8.3e-25 119.0 393 33.6
BraA09t39148Z Brassica rapa HOM05D000625 ORTHO05D000467 1.1e-24 118.6 387 30.7
CDE02G0202 Ceratophyllum demersum HOM05D000625 ORTHO05D000467 5.4e-24 116.3 429 30.8
PSO541G5001 Papaver somniferum HOM05D000625 ORTHO05D000467 1.6e-23 114.8 355 34.1
PSO675G7500 Papaver somniferum HOM05D000625 ORTHO05D000467 1.1e-21 108.6 353 32.9
EL10Ac8g19628 Beta vulgaris HOM05D000625 ORTHO05D000467 1.2e-20 105.1 320 30.9
CsaV3_1G036840 Cucumis sativus L. HOM05D000625 ORTHO05D000467 2.1e-20 104.4 239 37.2
BolC5t31645H Brassica oleracea HOM05D000625 ORTHO05D000467 3.6e-20 103.6 385 30.6
Migut.H01348 Erythranthe guttata HOM05D000625 ORTHO05D000467 1.0e-19 102.1 421 32.8
HPP92_028168 Vanilla planifolia HOM05D005567 ORTHO05D005651 5.7e-18 96.3 334 30.5
ATR1098G052 Amborella trichopoda HOM05D000625 ORTHO05D000467 4.1e-16 90.1 450 28.0
AUR62002681 Chenopodium quinoa HOM05D000625 ORTHO05D000467 7.0e-16 89.4 334 28.1
Hund21551 Selenicereus undatus HOM05D000625 ORTHO05D000467 8.6e-14 82.4 308 30.2
SGA_v2.0_scaffold106G30658 Striga asiatica HOM05D000625 ORTHO05D000467 1.1e-13 82.0 327 30.6
DCAR_003893 Daucus carota HOM05D000625 ORTHO05D000467 1.9e-13 81.3 346 26.9
Lj5g0018160 Lotus japonicus HOM05D000625 ORTHO05D000467 2.8e-12 77.4 59 61.0
AUR62030136 Chenopodium quinoa HOM05D000625 ORTHO05D000467 5.2e-11 73.2 325 28.3
SGA_v2.0_scaffold223G42823 Striga asiatica HOM05D000625 ORTHO05D000467 5.2e-11 73.2 121 43.8
BcaC05g27057 Brassica carinata HOM05D000625 ORTHO05D000467 1.2e-10 72.0 385 24.7
Medtr3g116155 Medicago truncatula HOM05D000625 ORTHO05D000467 1.5e-10 71.6 367 24.5
C05p29150 Brassica napus HOM05D000625 ORTHO05D000467 2.3e-06 57.8 127 37.8


User provided reference genes

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