Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g067920 Pisum sativum HOM05D000656 ORTHO05D321924 3.8e-49 198.0 108 100.0
Psat7g068120 Pisum sativum HOM05D000656 ORTHO05D320387 7.4e-45 183.7 108 91.7
Psat7g067880 Pisum sativum HOM05D000656 ORTHO05D324230 9.6e-45 183.3 108 92.6
Medtr8g087460 Medicago truncatula HOM05D000656 ORTHO05D012192 1.9e-37 159.1 110 84.5
Medtr8g087470 Medicago truncatula HOM05D000656 ORTHO05D012192 4.3e-37 157.9 110 83.6
Glyma.05G162000 Glycine max HOM05D000656 ORTHO05D012192 9.1e-27 123.6 111 69.4
Glyma.08G119600 Glycine max HOM05D000656 ORTHO05D012192 1.5e-26 122.9 111 69.4
TPR.G6795 Trifolium pratense HOM05D000656 ORTHO05D012192 1.5e-26 122.9 105 72.4
Phvul.002G241700 Phaseolus vulgaris HOM05D000656 ORTHO05D012192 1.6e-23 112.8 111 65.8
Glyma.13G226000 Glycine max HOM05D000656 ORTHO05D012192 4.7e-23 111.3 112 65.2
VMungo0251G1884 Vigna mungo HOM05D000656 ORTHO05D012192 1.5e-21 106.3 111 64.0
Lalb_Chr13g0295351 Lupinus albus HOM05D000656 ORTHO05D012192 2.0e-21 105.9 115 62.6
Glyma.15G086100 Glycine max HOM05D000656 ORTHO05D012192 2.8e-20 102.1 112 60.7
Lj4g0003016 Lotus japonicus HOM05D000656 ORTHO05D012479 3.7e-20 101.7 88 69.3
Phvul.006G172100 Phaseolus vulgaris HOM05D000656 ORTHO05D012192 8.5e-17 90.5 115 53.0
Medtr2g017950 Medicago truncatula HOM05D000656 ORTHO05D012192 4.7e-15 84.7 110 56.4
TPR.G6802 Trifolium pratense HOM05D000656 ORTHO05D012192 8.0e-15 84.0 72 73.6
Lalb_Chr07g0186231 Lupinus albus HOM05D000656 ORTHO05D012192 1.1e-13 80.1 115 54.8
arahy.Tifrunner.gnm1.ann1.P6N0JB Arachis hypogaea HOM05D000656 ORTHO05D011969 7.4e-13 77.4 89 50.6
arahy.Tifrunner.gnm1.ann1.8FP09Y Arachis hypogaea HOM05D000656 ORTHO05D012192 2.2e-12 75.9 41 92.7
arahy.Tifrunner.gnm1.ann1.A40EG2 Arachis hypogaea HOM05D000656 ORTHO05D012192 2.2e-12 75.9 41 92.7
arahy.Tifrunner.gnm1.ann1.1B6G8C Arachis hypogaea HOM05D000656 ORTHO05D011969 4.8e-12 74.7 106 44.3
arahy.Tifrunner.gnm1.ann1.WNDJ9P Arachis hypogaea HOM05D000656 ORTHO05D011969 4.8e-12 74.7 106 44.3
Lj3g0023498 Lotus japonicus HOM05D000656 ORTHO05D011969 4.8e-12 74.7 99 47.5
Lj3g0022175 Lotus japonicus HOM05D000656 ORTHO05D011969 2.4e-11 72.4 99 46.5
Psat1g194480 Pisum sativum HOM05D000656 ORTHO05D012192 3.1e-11 72.0 107 46.7
Ca_17890_v3 Cicer arietinum L. HOM05D000656 ORTHO05D012192 1.2e-10 70.1 108 53.7
VMungo1127G0299 Vigna mungo HOM05D000656 ORTHO05D011969 1.6e-10 69.7 77 50.6
Lj3g0025685 Lotus japonicus HOM05D000656 ORTHO05D012192 2.0e-10 69.3 49 75.5
VMungo1127G1899 Vigna mungo HOM05D000656 ORTHO05D011969 2.6e-10 68.9 77 50.6
arahy.Tifrunner.gnm1.ann1.X9WXHT Arachis hypogaea HOM05D000656 ORTHO05D010608 3.5e-10 68.6 105 45.7
Glyma.11G148700 Glycine max HOM05D000656 ORTHO05D010608 3.5e-10 68.6 103 44.7
Phvul.011G077000 Phaseolus vulgaris HOM05D000656 ORTHO05D011969 4.5e-10 68.2 75 50.7
Glyma.12G069900 Glycine max HOM05D000656 ORTHO05D011969 5.9e-10 67.8 96 44.8
Phvul.011G074600 Phaseolus vulgaris HOM05D000656 ORTHO05D012192 5.9e-10 67.8 112 43.8
Glyma.12G069500 Glycine max HOM05D000656 ORTHO05D011969 7.7e-10 67.4 96 44.8
VMungo0540G2407 Vigna mungo HOM05D000656 ORTHO05D012192 7.7e-10 67.4 107 46.7
TPR.G4564 Trifolium pratense HOM05D000656 ORTHO05D012192 1.3e-09 66.6 102 51.0
Phvul.011G077100 Phaseolus vulgaris HOM05D000656 ORTHO05D011969 1.7e-09 66.2 99 42.4
Glyma.11G148501 Glycine max HOM05D000656 ORTHO05D011969 2.2e-09 65.9 77 50.6
Lalb_Chr03g0027231 Lupinus albus HOM05D000656 ORTHO05D011969 2.9e-09 65.5 102 44.1
VMungo1127G1896 Vigna mungo HOM05D000656 ORTHO05D011969 2.9e-09 65.5 84 47.6
Phvul.011G074500 Phaseolus vulgaris HOM05D000656 ORTHO05D011969 3.8e-09 65.1 99 41.4
Lalb_Chr13g0295341 Lupinus albus HOM05D000656 ORTHO05D012479 8.5e-09 63.9 78 50.0
Medtr2g093980 Medicago truncatula HOM05D000656 ORTHO05D011969 8.5e-09 63.9 60 61.7
Phvul.011G074200 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 8.5e-09 63.9 84 47.6
Phvul.011G074250 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 8.5e-09 63.9 84 47.6
Potri.004G210600 Populus trichocarpa HOM05D000656 ORTHO05D000871 8.5e-09 63.9 53 62.3
Ca_05245_v3 Cicer arietinum L. HOM05D000656 ORTHO05D011969 1.1e-08 63.5 77 50.6
Glyma.11G148300 Glycine max HOM05D000656 ORTHO05D011969 1.1e-08 63.5 108 41.7
Glyma.11G156304 Glycine max HOM05D000656 ORTHO05D012192 1.1e-08 63.5 37 78.4
Glyma.12G069800 Glycine max HOM05D000656 ORTHO05D011969 1.1e-08 63.5 90 46.7
Glyma.11G156513 Glycine max HOM05D000656 ORTHO05D010608 1.5e-08 63.2 106 40.6
Glyma.12G069601 Glycine max HOM05D000656 ORTHO05D011969 1.5e-08 63.2 90 46.7
Manes.04G023100 Manihot esculenta HOM05D000656 ORTHO05D000871 1.5e-08 63.2 68 54.4
Glyma.11G148500 Glycine max HOM05D000656 ORTHO05D010608 1.9e-08 62.8 110 43.6
Phvul.011G077700 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 1.9e-08 62.8 111 41.4
Sabra04G0142200 Salix brachista HOM05D000656 ORTHO05D000871 1.9e-08 62.8 52 61.5
VMungo1127G0425 Vigna mungo HOM05D000656 ORTHO05D010608 1.9e-08 62.8 109 42.2
arahy.Tifrunner.gnm1.ann1.GZJ8DG Arachis hypogaea HOM05D000656 ORTHO05D000871 3.2e-08 62.0 99 44.4
CANSAT54G0824 Cannabis sativa HOM05D000656 ORTHO05D000871 3.2e-08 62.0 107 39.3
CANSAT54G2991 Cannabis sativa HOM05D000656 ORTHO05D000871 3.2e-08 62.0 107 39.3
Ca_17891_v3 Cicer arietinum L. HOM05D000656 ORTHO05D012479 3.2e-08 62.0 76 56.6
Phvul.011G074400 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 3.2e-08 62.0 98 41.8
Cc01_g11300 Coffea canephora HOM05D000656 ORTHO05D000871 5.5e-08 61.2 89 44.9
TPR.G11523 Trifolium pratense HOM05D000656 ORTHO05D011969 5.5e-08 61.2 60 58.3
VMungo1127G1550 Vigna mungo HOM05D000656 ORTHO05D010608 5.5e-08 61.2 63 54.0
Dinv35746 Davidia involucrata HOM05D000656 ORTHO05D000871 7.2e-08 60.8 82 50.0
Potri.009G012200 Populus trichocarpa HOM05D000656 ORTHO05D000871 7.2e-08 60.8 53 58.5
Glyma.11G155886 Glycine max HOM05D000656 ORTHO05D012192 9.4e-08 60.5 37 78.4
TPR.G4497 Trifolium pratense HOM05D000656 ORTHO05D012479 9.4e-08 60.5 69 53.6
VMungo1127G1957 Vigna mungo HOM05D000656 ORTHO05D000871 9.4e-08 60.5 102 42.2
Aqoxy4G03251 Aquilegia oxysepala HOM05D000656 ORTHO05D000871 1.2e-07 60.1 74 52.7
THA.LOC104826974 Tarenaya hassleriana HOM05D000656 ORTHO05D000871 1.2e-07 60.1 78 48.7
TPR.G6727 Trifolium pratense HOM05D000656 ORTHO05D012479 1.2e-07 60.1 100 41.0
Ca_01423_v3 Cicer arietinum L. HOM05D000656 ORTHO05D011969 1.6e-07 59.7 88 47.7
Lj3g0005476 Lotus japonicus HOM05D000656 ORTHO05D010608 1.6e-07 59.7 60 53.3
Sabra09G0008900 Salix brachista HOM05D000656 ORTHO05D000871 1.6e-07 59.7 52 59.6
TPR.G11593 Trifolium pratense HOM05D000656 ORTHO05D000871 1.6e-07 59.7 103 41.7
VMungo1127G0832 Vigna mungo HOM05D000656 ORTHO05D010608 1.6e-07 59.7 109 40.4
CiPaw.14G078900 Carya illinoinensis HOM05D000656 ORTHO05D000871 2.1e-07 59.3 46 65.2
Potri.012G015032 Populus trichocarpa HOM05D000656 ORTHO05D000871 2.1e-07 59.3 105 40.0
Sabra12G0016800 Salix brachista HOM05D000656 ORTHO05D000871 2.1e-07 59.3 105 41.9
Sabra12G0016900 Salix brachista HOM05D000656 ORTHO05D000871 2.1e-07 59.3 102 42.2
TPR.G15564 Trifolium pratense HOM05D000656 ORTHO05D010608 2.1e-07 59.3 104 39.4
arahy.Tifrunner.gnm1.ann1.H5YHMD Arachis hypogaea HOM05D000656 ORTHO05D010608 2.7e-07 58.9 111 40.5
CAN.G1169.5 Capsicum annuum HOM05D000656 ORTHO05D000871 2.7e-07 58.9 83 50.6
Ca_00475_v3 Cicer arietinum L. HOM05D000656 ORTHO05D012479 2.7e-07 58.9 68 52.9
Glyma.15G086000 Glycine max HOM05D000656 ORTHO05D012479 2.7e-07 58.9 109 43.1
Lj3g0012029 Lotus japonicus HOM05D000656 ORTHO05D010608 2.7e-07 58.9 102 40.2
Lalb_Chr07g0186241 Lupinus albus HOM05D000656 ORTHO05D012479 2.7e-07 58.9 102 46.1
Phvul.011G075050 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 2.7e-07 58.9 60 53.3
Phvul.L001754 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 2.7e-07 58.9 60 53.3
Potri.012G014966 Populus trichocarpa HOM05D000656 ORTHO05D000871 2.7e-07 58.9 102 41.2
TPR.G15546 Trifolium pratense HOM05D000656 ORTHO05D011969 2.7e-07 58.9 76 52.6
Atru.chr3.3665 Acer truncatum HOM05D000656 ORTHO05D000871 3.6e-07 58.5 47 66.0
arahy.Tifrunner.gnm1.ann1.0V7YUS Arachis hypogaea HOM05D000656 ORTHO05D010608 3.6e-07 58.5 111 40.5
Glyma.12G068900 Glycine max HOM05D000656 ORTHO05D010608 3.6e-07 58.5 111 38.7
Psat0s1587g0080 Pisum sativum HOM05D000656 ORTHO05D010608 3.6e-07 58.5 105 36.2
Phvul.011G076000 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 4.7e-07 58.2 84 44.0
Phvul.L001840 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 4.7e-07 58.2 84 44.0
Phvul.L001954 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 4.7e-07 58.2 84 44.0
SEGI_06329 Sequoiadendron giganteum HOM05D000656 ORTHO05D000871 4.7e-07 58.2 89 44.9
Ciclev10029172m.g Citrus clementina HOM05D000656 ORTHO05D000871 6.1e-07 57.8 103 41.7
Glyma.10G245800 Glycine max HOM05D000656 ORTHO05D010608 6.1e-07 57.8 109 39.4
Glyma.12G069700 Glycine max HOM05D000656 ORTHO05D010608 6.1e-07 57.8 98 38.8
Glyma.12G070000 Glycine max HOM05D000656 ORTHO05D010608 6.1e-07 57.8 98 38.8
Glyma.12G070200 Glycine max HOM05D000656 ORTHO05D010608 6.1e-07 57.8 98 38.8
Lj6g0005829 Lotus japonicus HOM05D000656 ORTHO05D012479 6.1e-07 57.8 88 46.6
CiPaw.14G079000 Carya illinoinensis HOM05D000656 ORTHO05D000871 8.0e-07 57.4 45 64.4
Glyma.11G147800 Glycine max HOM05D000656 ORTHO05D010608 8.0e-07 57.4 106 41.5
Medtr2g017960 Medicago truncatula HOM05D000656 ORTHO05D012479 8.0e-07 57.4 105 41.0
Potri.015G013300 Populus trichocarpa HOM05D000656 ORTHO05D000871 8.0e-07 57.4 106 39.6
VMungo1127G0871 Vigna mungo HOM05D000656 ORTHO05D011969 8.0e-07 57.4 95 45.3
Carub.0006s0196 Capsella rubella HOM05D000656 ORTHO05D000871 1.0e-06 57.0 100 42.0
Glyma.11G148400 Glycine max HOM05D000656 ORTHO05D010608 1.0e-06 57.0 105 37.1
Phvul.011G076900 Phaseolus vulgaris HOM05D000656 ORTHO05D010608 1.0e-06 57.0 57 56.1
CAN.G1169.6 Capsicum annuum HOM05D000656 ORTHO05D000871 1.4e-06 56.6 83 47.0
PSO384G2772 Papaver somniferum HOM05D000656 ORTHO05D000871 1.4e-06 56.6 101 39.6
Glyma.05G161900 Glycine max HOM05D000656 ORTHO05D012479 1.8e-06 56.2 102 44.1
Manes.11G143300 Manihot esculenta HOM05D000656 ORTHO05D000871 1.8e-06 56.2 41 63.4
Medtr2g017970 Medicago truncatula HOM05D000656 ORTHO05D012479 1.8e-06 56.2 66 54.5
Medtr4g053380 Medicago truncatula HOM05D000656 ORTHO05D010608 1.8e-06 56.2 106 39.6
arahy.Tifrunner.gnm1.ann1.3QT14C Arachis hypogaea HOM05D000656 ORTHO05D012479 2.3e-06 55.8 76 44.7
arahy.Tifrunner.gnm1.ann1.X9C0XD Arachis hypogaea HOM05D000656 ORTHO05D000871 2.3e-06 55.8 94 42.6
Ca_05243_v3 Cicer arietinum L. HOM05D000656 ORTHO05D010608 2.3e-06 55.8 112 41.1
DCAR_018821 Daucus carota HOM05D000656 ORTHO05D000871 2.3e-06 55.8 96 45.8
Glyma.03G180000 Glycine max HOM05D000656 ORTHO05D000871 2.3e-06 55.8 80 43.8
Medtr4g059780 Medicago truncatula HOM05D000656 ORTHO05D011969 2.3e-06 55.8 80 48.8
PSO339G4503 Papaver somniferum HOM05D000656 ORTHO05D000871 2.3e-06 55.8 101 39.6
PGSC0003DMG400010459 Solanum tuberosum HOM05D000656 ORTHO05D000871 2.3e-06 55.8 79 49.4
arahy.Tifrunner.gnm1.ann1.A4NC5F Arachis hypogaea HOM05D000656 ORTHO05D010608 3.0e-06 55.5 88 42.0
ClCG04G008940 Citrullus lanatus HOM05D000656 ORTHO05D000871 3.0e-06 55.5 94 43.6
Ciclev10030205m.g Citrus clementina HOM05D000656 ORTHO05D000871 3.0e-06 55.5 49 63.3
Lj3g0021116 Lotus japonicus HOM05D000656 ORTHO05D010608 3.0e-06 55.5 46 58.7
Manes.03G068114 Manihot esculenta HOM05D000656 ORTHO05D000871 3.0e-06 55.5 54 55.6
Oeu014961.1 Olea europaea HOM05D000656 ORTHO05D000871 3.0e-06 55.5 75 50.7
PGSC0003DMG400008063 Solanum tuberosum HOM05D000656 ORTHO05D000871 3.0e-06 55.5 102 40.2
EL10Ac7g16536 Beta vulgaris HOM05D000656 ORTHO05D000871 4.0e-06 55.1 77 42.9
CAN.G1169.7 Capsicum annuum HOM05D000656 ORTHO05D000871 4.0e-06 55.1 71 46.5
Ca_08839_v3 Cicer arietinum L. HOM05D000656 ORTHO05D000871 4.0e-06 55.1 80 45.0
Haze_23877 Corylus avellana HOM05D000656 ORTHO05D000871 4.0e-06 55.1 51 51.0
CsaV3_6G039450 Cucumis sativus L. HOM05D000656 ORTHO05D000871 4.0e-06 55.1 96 42.7
arahy.Tifrunner.gnm1.ann1.D2IUDG Arachis hypogaea HOM05D000656 ORTHO05D011969 5.2e-06 54.7 76 43.4
CiPaw.13G110400 Carya illinoinensis HOM05D000656 ORTHO05D000871 5.2e-06 54.7 44 68.2
Ca_05242_v3 Cicer arietinum L. HOM05D000656 ORTHO05D010608 5.2e-06 54.7 113 38.9
Lsat_1_v5_gn_1_65560 Lactuca sativa HOM05D000656 ORTHO05D000871 5.2e-06 54.7 68 48.5
Nitab4.5_0000101g0040 Nicotiana tabacum HOM05D000656 ORTHO05D000871 5.2e-06 54.7 60 53.3
CAN.G1169.4 Capsicum annuum HOM05D000656 ORTHO05D000871 6.7e-06 54.3 60 51.7
CiPaw.13G110500 Carya illinoinensis HOM05D000656 ORTHO05D000871 6.7e-06 54.3 41 68.3
Haze_23879 Corylus avellana HOM05D000656 ORTHO05D000871 6.7e-06 54.3 47 53.2
Dinv35748 Davidia involucrata HOM05D000656 ORTHO05D000871 6.7e-06 54.3 82 47.6
Manes.03G068416 Manihot esculenta HOM05D000656 ORTHO05D000871 6.7e-06 54.3 54 53.7
Manes.03G074600 Manihot esculenta HOM05D000656 ORTHO05D000871 6.7e-06 54.3 54 53.7
Oeu014964.1 Olea europaea HOM05D000656 ORTHO05D000871 6.7e-06 54.3 88 50.0
Phvul.002G241600 Phaseolus vulgaris HOM05D000656 ORTHO05D012479 6.7e-06 54.3 49 57.1
TPR.G15548 Trifolium pratense HOM05D000656 ORTHO05D010608 6.7e-06 54.3 105 36.2
CSS0030689 Camellia sinensis var. sinensis HOM05D000656 ORTHO05D000871 8.8e-06 53.9 45 62.2
CSS0041644 Camellia sinensis var. sinensis HOM05D000656 ORTHO05D000871 8.8e-06 53.9 89 42.7
Manes.04G023200 Manihot esculenta HOM05D000656 ORTHO05D000871 8.8e-06 53.9 42 61.9
Medtr4g059840 Medicago truncatula HOM05D000656 ORTHO05D010608 8.8e-06 53.9 51 54.9
QL01p022740 Quercus lobata HOM05D000656 ORTHO05D000871 8.8e-06 53.9 37 70.3
Sabra15G0142700 Salix brachista HOM05D000656 ORTHO05D000871 8.8e-06 53.9 37 64.9
TWI53G0055 Tripterygium wilfordii HOM05D000656 ORTHO05D000871 8.8e-06 53.9 72 47.2
TAR369G0387 Trochodendron aralioides HOM05D000656 ORTHO05D000871 8.8e-06 53.9 46 58.7


User provided reference genes

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