Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 6.6e-82 307.4 161 100.0
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 4.0e-47 191.8 165 68.5
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 6.9e-47 191.0 164 67.7
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 6.0e-43 177.9 154 66.2
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 8.4e-37 157.5 163 58.9
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 9.3e-36 154.1 157 59.2
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.8e-34 149.8 156 55.1
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 3.3e-33 145.6 166 54.8
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 8.2e-32 141.0 159 54.1
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 8.8e-26 120.9 157 45.9
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 8.8e-18 94.4 156 43.6
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 3.3e-17 92.4 141 42.6
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 1.3e-16 90.5 126 45.2
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 1.8e-15 86.7 137 37.2
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 2.4e-15 86.3 120 46.7
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.5e-14 83.6 158 37.3
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 1.5e-14 83.6 127 43.3
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.0e-14 83.2 127 45.7
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.0e-13 80.9 132 43.2
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.7e-13 80.1 124 46.0
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 5.0e-13 78.6 147 42.2
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 8.5e-13 77.8 134 36.6
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.6e-11 73.6 141 38.3
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 2.7e-11 72.8 127 35.4
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.8e-10 70.1 121 42.1
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.8e-10 70.1 121 42.1
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 2.3e-10 69.7 153 37.3
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.0e-10 69.3 121 41.3
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 3.0e-10 69.3 129 35.7
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 5.2e-10 68.6 125 37.6
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 5.2e-10 68.6 141 36.9
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 6.7e-10 68.2 139 34.5
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.1e-09 67.4 120 40.8
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.0e-09 66.6 124 38.7
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 3.3e-09 65.9 133 35.3
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 3.3e-09 65.9 117 41.0
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 7.4e-09 64.7 145 34.5
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.3e-08 63.9 132 35.6
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.2e-08 63.2 137 34.3
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 2.8e-08 62.8 129 35.7
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 2.8e-08 62.8 129 35.7
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 2.8e-08 62.8 129 35.7
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 2.8e-08 62.8 123 34.1
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 2.8e-08 62.8 115 36.5
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 2.8e-08 62.8 122 37.7
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 2.8e-08 62.8 124 34.7
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 4.8e-08 62.0 136 35.3
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 4.8e-08 62.0 131 35.1
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 4.8e-08 62.0 137 32.8
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 6.3e-08 61.6 138 35.5
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 8.2e-08 61.2 119 38.7
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.1e-07 60.8 135 36.3
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.1e-07 60.8 134 29.9
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.4e-07 60.5 127 37.0
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.4e-07 60.5 158 31.6
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.4e-07 60.5 119 39.5
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 1.8e-07 60.1 128 36.7
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 2.4e-07 59.7 128 36.7
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 3.1e-07 59.3 126 34.9
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 3.1e-07 59.3 128 32.8
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.1e-07 59.3 119 38.7
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 3.1e-07 59.3 125 36.8
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 3.1e-07 59.3 126 33.3
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 5.3e-07 58.5 106 41.5
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 7.0e-07 58.2 177 33.3
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 7.0e-07 58.2 164 29.9
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 9.1e-07 57.8 118 37.3
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 9.1e-07 57.8 136 31.6
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 1.2e-06 57.4 139 35.3
A09p35930 Brassica napus HOM05D012212 ORTHO05D006213 1.2e-06 57.4 135 34.1
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.2e-06 57.4 128 30.5
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 2.0e-06 56.6 132 31.8
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 2.0e-06 56.6 132 31.8
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 2.0e-06 56.6 132 31.8
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 2.6e-06 56.2 138 34.1
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 3.5e-06 55.8 128 37.5
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 5.9e-06 55.1 123 37.4
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 5.9e-06 55.1 127 33.9
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 5.9e-06 55.1 136 29.4
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 5.9e-06 55.1 132 31.1
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 7.7e-06 54.7 136 31.6


User provided reference genes

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