Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 6.7e-243 843.6 421 100.0
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.1e-218 763.1 423 90.8
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.3e-206 723.0 410 90.2
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 8.6e-198 693.7 422 85.3
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.1e-192 676.8 409 83.1
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 7.0e-192 674.1 390 85.9
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 5.9e-191 671.0 381 86.6
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 6.6e-190 667.5 420 80.0
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 3.3e-189 665.2 423 78.5
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 9.5e-189 663.7 407 81.3
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 2.0e-178 629.4 391 81.1
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 9.5e-173 610.5 414 75.6
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 6.4e-169 597.8 386 75.4
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 9.2e-168 594.0 363 79.9
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 2.3e-166 589.3 386 75.4
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 5.1e-166 588.2 386 74.9
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 5.1e-166 588.2 386 74.9
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 5.1e-166 588.2 367 78.2
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 6.6e-166 587.8 386 75.1
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 8.6e-166 587.4 367 78.5
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.5e-165 586.6 418 71.3
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.5e-165 585.9 386 74.1
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 4.3e-165 585.1 393 73.8
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 5.6e-165 584.7 369 78.3
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 9.5e-165 583.9 375 76.0
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 1.6e-164 583.2 409 72.1
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 8.1e-164 580.9 419 70.4
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 4.0e-163 578.6 379 75.2
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 2.6e-162 575.9 418 71.1
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 4.9e-161 571.6 384 73.4
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 5.4e-160 568.2 398 71.6
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 2.7e-159 565.8 420 65.7
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 7.8e-159 564.3 398 69.8
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 8.6e-158 560.8 391 70.3
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.5e-157 560.1 366 75.1
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 4.3e-157 558.5 411 66.7
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 7.3e-157 557.8 372 72.6
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 1.6e-156 556.6 360 74.2
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.6e-156 556.6 401 69.3
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.1e-156 556.2 360 74.4
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 2.1e-156 556.2 417 68.1
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 2.8e-156 555.8 360 74.4
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 3.6e-156 555.4 376 71.5
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 6.2e-156 554.7 372 72.6
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.4e-155 553.5 421 66.0
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.4e-155 552.7 399 68.4
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 3.1e-155 552.4 401 68.8
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 4.0e-155 552.0 402 68.2
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 4.0e-155 552.0 416 66.1
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.3e-153 547.0 359 73.3
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.9e-153 545.8 369 72.1
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 4.9e-153 545.0 439 63.6
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.1e-152 543.9 372 70.7
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.2e-151 540.4 389 66.8
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 7.8e-151 537.7 394 68.3
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.3e-150 537.0 410 65.9
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 2.3e-150 536.2 365 70.1
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 3.9e-150 535.4 417 65.2
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.9e-149 533.1 396 65.7
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 9.6e-149 530.8 347 73.2
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.6e-148 530.0 453 63.4
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.0e-146 523.1 416 66.6
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 2.6e-146 522.7 411 64.0
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 4.5e-146 521.9 398 64.1
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 7.6e-146 521.2 377 66.6
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.3e-145 520.4 393 66.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 3.8e-145 518.8 396 64.4
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 8.4e-145 517.7 448 62.9
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.1e-144 517.3 352 72.2
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 4.2e-144 515.4 379 67.3
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.3e-142 509.6 416 63.9
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.6e-140 503.4 366 67.2
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 5.3e-139 498.4 384 64.6
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 5.3e-139 498.4 377 65.5
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 2.6e-138 496.1 402 61.9
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.7e-137 493.4 368 67.1
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 4.6e-135 485.3 480 54.0
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.3e-134 483.8 393 64.4
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.8e-134 483.4 347 70.0
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.2e-127 460.7 410 56.3
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.3e-126 456.4 354 65.8
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.2e-119 434.1 314 70.4
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.5e-117 427.2 360 56.1
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.1e-115 421.0 343 59.8
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.1e-115 421.0 435 55.2
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 2.0e-114 416.8 403 56.6
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 5.7e-109 398.7 416 54.3
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.3e-105 387.5 356 54.8
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 3.6e-103 379.4 357 52.4
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 9.1e-99 364.8 336 53.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.6e-98 364.0 236 72.9
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 4.5e-98 362.5 236 72.5
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 7.7e-98 361.7 415 50.6
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.1e-88 331.3 284 58.8
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 4.7e-79 299.3 369 45.5
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 5.0e-65 252.7 375 40.5
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 6.6e-65 252.3 395 42.3
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.2e-50 204.9 127 77.2
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.7e-50 203.8 130 73.8
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 3.5e-42 176.8 151 62.3
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 1.1e-40 171.8 108 77.8
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.6e-39 167.9 183 49.2
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 4.3e-24 116.7 125 51.2
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 8.1e-23 112.5 168 38.7
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.1e-22 112.1 79 63.3
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.4e-22 111.7 112 50.9
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 2.4e-22 110.9 99 57.6
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 2.0e-21 107.8 82 64.6
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 9.9e-21 105.5 375 26.4
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 4.2e-19 100.1 60 76.7
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 9.3e-19 99.0 78 65.4
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.9e-17 93.6 64 68.8
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.1e-16 92.0 224 32.1
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 1.4e-14 85.1 76 57.9
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 3.1e-14 84.0 178 33.1
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.0e-12 79.0 52 75.0
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 9.3e-11 72.4 335 25.4


User provided reference genes

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