Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 8.5e-152 540.4 269 100.0
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 2.2e-128 462.6 271 86.7
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.2e-118 430.3 275 78.9
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 3.0e-117 425.6 272 79.4
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 8.9e-117 424.1 266 80.1
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 8.6e-112 407.5 273 76.9
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 7.3e-111 404.4 269 75.5
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 4.4e-108 395.2 273 75.5
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 2.9e-107 392.5 273 75.1
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 5.4e-106 388.3 273 73.3
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 3.6e-102 375.6 281 69.8
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 1.3e-99 367.1 277 70.4
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 2.4e-98 362.8 268 67.9
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 3.2e-98 362.5 270 68.5
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 3.5e-97 359.0 270 65.9
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 4.6e-97 358.6 270 65.9
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.5e-95 353.6 273 66.7
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.9e-95 353.2 269 65.1
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 3.3e-95 352.4 271 67.2
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 5.6e-95 351.7 269 65.8
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 7.3e-95 351.3 265 66.4
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 2.1e-94 349.7 270 64.1
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 2.8e-94 349.4 263 66.9
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 4.7e-94 348.6 270 65.6
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 1.4e-93 347.1 271 66.1
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 1.4e-93 347.1 270 64.8
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 4.0e-93 345.5 271 63.1
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 5.2e-93 345.1 272 64.3
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 2.6e-92 342.8 271 64.2
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 1.3e-91 340.5 271 64.2
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.7e-91 340.1 285 64.2
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 2.2e-91 339.7 285 62.5
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 2.9e-91 339.3 269 63.6
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 4.9e-91 338.6 192 89.6
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 4.9e-91 338.6 267 64.0
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 6.4e-91 338.2 305 59.3
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 1.1e-90 337.4 295 60.3
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.1e-90 337.4 276 62.3
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 1.4e-90 337.0 269 66.2
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 5.4e-90 335.1 272 64.7
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 7.1e-90 334.7 270 62.6
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 9.2e-90 334.3 232 69.0
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.2e-89 334.0 270 63.0
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.2e-89 334.0 270 63.0
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.2e-89 334.0 269 62.1
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 1.2e-89 334.0 270 63.0
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.6e-89 333.6 270 63.0
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.5e-89 332.4 270 62.6
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.0e-88 330.9 269 63.2
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.3e-88 330.5 269 61.7
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 3.0e-88 329.3 321 57.3
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.1e-87 327.4 210 73.3
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 1.9e-87 326.6 270 61.9
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.9e-87 326.6 271 61.6
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.9e-87 326.6 272 61.8
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 1.9e-87 326.6 271 62.0
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 4.3e-87 325.5 301 58.1
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 7.3e-87 324.7 275 63.3
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 2.8e-86 322.8 329 53.8
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 2.8e-86 322.8 353 52.7
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 6.2e-86 321.6 274 61.7
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 6.2e-86 321.6 221 69.7
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 6.2e-86 321.6 257 63.4
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.4e-85 320.5 271 61.3
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 3.1e-85 319.3 264 60.2
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 8.9e-85 317.8 272 62.5
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.6e-84 316.2 272 61.4
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 2.6e-84 316.2 278 60.4
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 8.4e-83 311.2 267 60.3
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 8.4e-83 311.2 220 69.1
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 9.2e-82 307.8 264 59.8
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 1.6e-81 307.0 229 65.5
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 2.7e-81 306.2 250 60.4
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 3.5e-81 305.8 316 55.4
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 1.3e-80 303.9 271 59.8
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 7.3e-79 298.1 273 59.3
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.8e-77 293.5 269 58.0
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 2.4e-77 293.1 224 65.2
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 2.4e-77 293.1 271 59.8
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 6.9e-77 291.6 194 71.1
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 1.5e-76 290.4 269 61.3
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 8.4e-75 284.6 272 56.2
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 7.1e-74 281.6 234 61.5
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.6e-73 280.4 313 50.8
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 2.1e-73 280.0 199 67.8
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 6.0e-73 278.5 189 70.9
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 2.3e-72 276.6 263 56.7
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 8.7e-72 274.6 230 60.9
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.8e-69 266.9 190 70.0
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.8e-69 266.9 229 59.0
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 6.9e-69 265.0 195 67.2
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 2.6e-68 263.1 184 69.6
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 5.8e-68 261.9 193 66.3
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 2.9e-67 259.6 265 52.1
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 8.4e-67 258.1 266 54.5
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 2.1e-65 253.4 212 56.1
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 1.3e-64 250.8 290 48.3
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 3.1e-61 239.6 284 44.7
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 3.2e-58 229.6 147 73.5
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 1.5e-55 220.7 217 47.9
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 5.6e-55 218.8 208 51.4
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 2.4e-53 213.4 166 57.2
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 5.8e-52 208.8 200 51.5
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 1.1e-50 204.5 288 45.1
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 1.4e-45 187.6 133 69.9
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.9e-42 177.2 183 53.0
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.1e-37 161.4 221 36.7
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 2.3e-32 143.7 191 46.6
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 7.7e-28 128.6 219 38.8
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.0e-24 118.2 104 54.8
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 3.1e-21 106.7 94 60.6
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 7.0e-21 105.5 56 80.4
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 1.7e-19 100.9 63 77.8
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 2.2e-19 100.5 59 74.6
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 8.0e-17 92.0 88 52.3
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 7.5e-15 85.5 98 48.0
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 4.8e-14 82.8 76 59.2
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 1.3e-11 74.7 90 42.2
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 8.0e-09 65.5 93 45.2
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.0e-08 65.1 80 47.5


User provided reference genes

Program Settings