Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 9.3e-144 513.5 246 100.0
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 5.8e-122 441.0 243 89.3
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 5.5e-120 434.5 248 87.1
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 7.4e-117 424.1 246 84.6
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 7.4e-117 424.1 246 84.6
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 1.9e-109 399.4 248 79.0
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 2.4e-107 392.5 251 77.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 9.0e-107 390.6 249 77.5
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 4.5e-106 388.3 246 77.6
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 3.0e-102 375.6 241 75.5
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.9e-96 356.3 219 77.6
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 7.2e-96 354.4 218 76.6
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 1.2e-95 353.6 249 71.5
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 2.1e-95 352.8 219 76.7
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.1e-95 352.8 219 76.7
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 2.1e-95 352.8 246 72.8
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 1.0e-94 350.5 252 71.0
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 1.8e-94 349.7 253 69.6
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 5.1e-94 348.2 242 69.0
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 1.1e-93 347.1 238 72.3
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 2.6e-93 345.9 250 69.2
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 7.4e-93 344.4 249 68.7
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 7.4e-93 344.4 254 69.7
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 9.7e-93 344.0 253 69.6
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.7e-92 343.2 256 68.0
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 6.3e-92 341.3 256 67.6
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.8e-91 339.7 256 67.2
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 7.0e-91 337.8 247 67.6
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 1.2e-90 337.0 249 67.5
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 5.9e-90 334.7 229 70.7
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 2.2e-89 332.8 258 64.0
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 2.9e-89 332.4 184 83.7
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 3.8e-89 332.0 202 76.2
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 2.5e-88 329.3 208 75.0
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 7.2e-88 327.8 248 65.7
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 7.2e-88 327.8 252 65.5
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 3.6e-87 325.5 214 71.5
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 6.1e-87 324.7 253 65.6
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 1.0e-86 323.9 252 66.3
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.8e-86 323.2 252 64.7
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 2.3e-86 322.8 252 64.7
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 1.1e-85 320.5 244 66.0
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 1.5e-85 320.1 197 74.6
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.0e-85 319.7 218 72.0
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 2.0e-85 319.7 251 65.3
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 2.6e-85 319.3 202 72.3
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 2.6e-85 319.3 202 72.3
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 4.4e-85 318.5 200 75.0
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 4.4e-85 318.5 260 63.5
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 5.7e-85 318.2 250 64.0
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 1.7e-84 316.6 199 72.9
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.7e-84 316.6 238 66.4
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 2.2e-84 316.2 199 72.4
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 2.8e-84 315.8 240 65.0
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 4.8e-84 315.1 182 78.6
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 4.8e-84 315.1 236 66.5
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 6.3e-84 314.7 205 71.7
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.2e-84 314.3 252 63.9
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 1.4e-83 313.5 246 65.4
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 1.4e-83 313.5 245 65.7
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.4e-83 313.5 251 64.1
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 1.8e-83 313.2 204 71.1
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 2.4e-83 312.8 250 63.6
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 3.1e-83 312.4 201 72.6
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 4.1e-83 312.0 201 72.1
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 4.1e-83 312.0 236 66.5
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 7.0e-83 311.2 204 69.6
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 2.0e-82 309.7 195 71.3
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 2.7e-82 309.3 200 70.0
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 4.5e-82 308.5 247 64.0
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 7.7e-82 307.8 244 64.8
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 7.7e-82 307.8 241 62.2
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 1.0e-81 307.4 251 64.1
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 1.0e-81 307.4 250 64.8
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 6.5e-81 304.7 238 64.7
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 1.2e-79 300.4 247 60.3
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 1.6e-79 300.1 198 68.7
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 2.7e-79 299.3 244 60.2
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 3.6e-79 298.9 206 69.4
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 2.3e-78 296.2 176 79.0
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 2.3e-78 296.2 249 60.2
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 1.5e-77 293.5 256 58.6
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 4.4e-77 292.0 245 59.6
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 4.4e-77 292.0 259 59.1
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 5.7e-77 291.6 203 69.5
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.7e-76 290.0 183 72.7
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 2.8e-76 289.3 198 67.2
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 4.8e-76 288.5 231 61.0
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 6.3e-76 288.1 206 67.0
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 1.1e-75 287.3 203 68.0
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 5.4e-75 285.0 180 71.7
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.7e-73 280.0 249 57.8
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 2.9e-73 279.3 169 74.0
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 8.5e-73 277.7 170 73.5
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 1.5e-72 276.9 206 66.0
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 4.0e-70 268.9 201 62.7
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.7e-68 263.5 169 73.4
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 8.0e-63 244.6 237 53.6
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.0e-58 229.9 176 63.6
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 2.3e-57 226.5 238 52.9
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.9e-56 223.4 134 75.4
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 4.3e-56 222.2 174 58.0
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 1.2e-55 220.7 267 45.3
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 8.0e-55 218.0 196 54.1
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.9e-35 153.7 169 53.3
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 1.9e-32 143.7 154 48.1
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.4e-22 110.9 64 73.4
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 3.1e-22 109.8 239 33.9
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.5e-21 107.5 71 67.6
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.7e-20 104.0 60 73.3
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.2e-18 97.8 80 57.5
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 1.2e-18 97.8 169 34.9
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 9.3e-11 71.6 61 47.5


User provided reference genes

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