Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 1.8e-125 452.6 232 100.0
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 3.6e-105 385.2 234 87.2
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 8.8e-104 380.6 234 86.8
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 5.0e-91 338.2 232 79.7
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 3.6e-89 332.0 244 74.2
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 8.0e-89 330.9 242 74.8
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 6.8e-88 327.8 245 73.1
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 7.5e-79 297.7 234 71.8
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 1.1e-77 293.9 156 96.8
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 4.1e-77 292.0 226 69.0
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 2.3e-75 286.2 224 68.8
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 3.0e-75 285.8 236 65.3
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 6.6e-75 284.6 217 70.5
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 7.3e-74 281.2 229 67.7
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 1.1e-72 277.3 237 67.5
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 5.2e-72 275.0 229 67.2
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 1.2e-71 273.9 240 65.4
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 4.4e-71 271.9 232 65.5
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 1.3e-70 270.4 241 63.1
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 1.3e-70 270.4 219 65.3
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 3.7e-70 268.9 240 64.2
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 3.7e-70 268.9 236 63.6
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 3.2e-69 265.8 231 65.4
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 5.4e-69 265.0 247 62.3
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 7.1e-69 264.6 232 64.2
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 7.1e-69 264.6 223 65.9
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 9.2e-69 264.2 217 64.1
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 2.1e-68 263.1 225 65.8
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 4.6e-68 261.9 236 63.6
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 7.8e-68 261.2 208 68.3
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.8e-68 261.2 208 68.3
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.8e-68 261.2 236 63.1
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 7.8e-68 261.2 244 61.9
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 1.3e-67 260.4 189 72.0
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 1.7e-67 260.0 233 63.9
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 3.9e-67 258.8 238 62.2
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 6.6e-67 258.1 218 66.1
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 6.6e-67 258.1 218 66.1
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 6.6e-67 258.1 230 62.2
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 2.5e-66 256.1 234 62.0
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 3.3e-66 255.8 241 59.8
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.3e-66 255.8 229 62.4
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 7.3e-66 254.6 228 61.4
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 9.5e-66 254.2 229 62.0
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 9.5e-66 254.2 237 62.4
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 1.2e-65 253.8 231 59.7
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 2.1e-65 253.1 245 61.2
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 4.7e-65 251.9 155 79.4
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 1.1e-64 250.8 240 62.1
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 1.1e-64 250.8 236 60.2
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 1.4e-64 250.4 250 60.8
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 8.9e-64 247.7 233 58.4
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 2.0e-63 246.5 155 78.7
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 5.8e-63 245.0 224 62.5
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 5.8e-63 245.0 243 58.8
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 6.4e-62 241.5 193 69.4
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.9e-61 240.0 287 52.6
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 7.8e-60 234.6 217 60.8
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 2.5e-58 229.6 157 72.0
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 7.6e-55 218.0 229 57.2
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 3.3e-50 202.6 157 63.7
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 4.8e-49 198.7 177 58.8
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 2.3e-43 179.9 152 58.6
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 9.6e-42 174.5 98 84.7
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 7.1e-37 158.3 250 46.0
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 3.3e-34 149.4 243 42.8
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 1.2e-31 141.0 114 67.5
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.3e-26 122.5 146 52.1
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.4e-26 121.7 135 53.3
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 3.3e-18 96.3 134 38.1
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 7.7e-15 85.1 56 73.2
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 2.2e-14 83.6 50 78.0
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 2.9e-14 83.2 50 76.0
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 8.5e-14 81.6 48 79.2
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 5.5e-13 79.0 144 40.3
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 7.2e-13 78.6 58 70.7
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 1.6e-12 77.4 118 42.4
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 2.7e-12 76.6 48 75.0
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 8.8e-11 71.6 47 74.5
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 4.5e-07 59.3 92 37.0
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 5.9e-07 58.9 118 29.7
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 7.7e-07 58.5 119 29.4
PRCOL_00005335 Prasinoderma coloniale HOM05D016266 ORTHO05D019595 2.9e-06 56.6 94 29.8
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 3.8e-06 56.2 29 93.1


User provided reference genes

Program Settings