Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g045640 Pisum sativum HOM05D008093 ORTHO05D009840 2.9e-45 184.9 95 100.0
Ca_17640_v3 Cicer arietinum L. HOM05D008093 ORTHO05D009840 3.7e-32 141.4 90 80.0
Medtr8g093620 Medicago truncatula HOM05D008093 ORTHO05D009840 3.5e-30 134.8 90 80.0
Glyma.05G191500 Glycine max HOM05D008093 ORTHO05D009840 1.8e-26 122.5 98 68.4
VMungo0251G0054 Vigna mungo HOM05D008093 ORTHO05D009840 5.7e-25 117.5 100 65.0
Lj4g0016515 Lotus japonicus HOM05D008093 ORTHO05D009840 1.1e-23 113.2 110 61.8
Phvul.002G271900 Phaseolus vulgaris HOM05D008093 ORTHO05D009840 1.1e-23 113.2 99 63.6
Lalb_Chr07g0184461 Lupinus albus HOM05D008093 ORTHO05D009840 2.4e-23 112.1 92 66.3
Glyma.08G156600 Glycine max HOM05D008093 ORTHO05D009840 7.0e-23 110.5 90 68.9
arahy.Tifrunner.gnm1.ann1.IYM9ZI Arachis hypogaea HOM05D008093 ORTHO05D009840 1.7e-21 105.9 93 62.4
Lalb_Chr12g0203141 Lupinus albus HOM05D008093 ORTHO05D009840 5.5e-20 100.9 99 60.6
Nn5g28574 Nelumbo nucifera HOM05D008093 ORTHO05D009840 3.4e-17 91.7 88 55.7
Oeu033661.1 Olea europaea HOM05D008093 ORTHO05D009840 7.5e-17 90.5 90 53.3
Hma1.2p1_0476F.1_g160900 Hydrangea macrophylla HOM05D008093 ORTHO05D009840 2.2e-16 89.0 88 54.5
Dinv24346 Davidia involucrata HOM05D008093 ORTHO05D009840 6.3e-16 87.4 88 56.8
Oeu042288.1 Olea europaea HOM05D008093 ORTHO05D009840 1.1e-15 86.7 88 52.3
CiPaw.04G083000 Carya illinoinensis HOM05D008093 ORTHO05D009840 1.8e-15 85.9 91 54.9
Actinidia06628 Actinidia chinensis HOM05D008093 ORTHO05D009840 4.1e-15 84.7 88 53.4
Manes.12G154600 Manihot esculenta HOM05D008093 ORTHO05D009840 2.7e-14 82.0 88 53.4
QL06p028766 Quercus lobata HOM05D008093 ORTHO05D009840 2.7e-14 82.0 89 53.9
Solyc11g005930.2 Solanum lycopersicum HOM05D008093 ORTHO05D009840 3.5e-14 81.6 90 51.1
FvH4_1g13550 Fragaria vesca HOM05D008093 ORTHO05D009840 4.5e-14 81.3 91 51.6
FAN26G1298 Fragaria x ananassa HOM05D008093 ORTHO05D009840 4.5e-14 81.3 91 51.6
FAN28G2095 Fragaria x ananassa HOM05D008093 ORTHO05D009840 7.7e-14 80.5 91 50.5
MBI03_g00424_MAGBIO Magnolia biondii HOM05D008093 ORTHO05D009840 1.0e-13 80.1 93 48.4
Thecc.01G130900 Theobroma cacao HOM05D008093 ORTHO05D009840 1.0e-13 80.1 94 47.9
COL.COLO4_35729 Corchorus olitorius HOM05D008093 ORTHO05D009840 1.3e-13 79.7 92 52.2
Duzib264G0739 Durio zibethinus HOM05D008093 ORTHO05D009840 1.3e-13 79.7 89 49.4
RcHm_v2.0_Chr2g0101941 Rosa chinensis HOM05D008093 ORTHO05D009840 1.7e-13 79.3 86 50.0
Gohir.A05G385600 Gossypium hirsutum HOM05D008093 ORTHO05D009840 2.3e-13 79.0 89 49.4
Sopen11g001870 Solanum pennellii HOM05D008093 ORTHO05D009840 2.3e-13 79.0 91 50.5
CiPaw.04G083200 Carya illinoinensis HOM05D008093 ORTHO05D009840 2.9e-13 78.6 91 51.6
PGSC0003DMG400028663 Solanum tuberosum HOM05D008093 ORTHO05D009840 3.8e-13 78.2 93 49.5
Nitab4.5_0000856g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 5.0e-13 77.8 88 53.4
Potri.005G058800 Populus trichocarpa HOM05D008093 ORTHO05D009840 6.5e-13 77.4 90 50.0
ClCG02G000540 Citrullus lanatus HOM05D008093 ORTHO05D009840 1.5e-12 76.3 88 52.3
Nitab4.5_0002667g0080 Nicotiana tabacum HOM05D008093 ORTHO05D009840 1.5e-12 76.3 88 51.1
Cfa002886 Carpinus fangiana HOM05D008093 ORTHO05D009840 1.9e-12 75.9 89 49.4
Peaxi162Scf00589g00323 Petunia axillaris HOM05D008093 ORTHO05D009840 1.9e-12 75.9 98 53.1
Nitab4.5_0013695g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 3.2e-12 75.1 89 47.2
MD15G1265300 Malus domestica HOM05D008093 ORTHO05D009840 1.2e-11 73.2 104 45.2
Sed0027082 Sechium edule HOM05D008093 ORTHO05D009840 2.8e-11 72.0 93 48.4
Gorai.012G034100 Gossypium raimondii HOM05D008093 ORTHO05D009840 8.0e-11 70.5 53 62.3
EL10Ac4g09593 Beta vulgaris HOM05D008093 ORTHO05D009840 1.0e-10 70.1 94 40.4
Potri.007G109200 Populus trichocarpa HOM05D008093 ORTHO05D009840 1.0e-10 70.1 101 43.6
CsaV3_2G018270 Cucumis sativus L. HOM05D008093 ORTHO05D009840 1.4e-10 69.7 95 48.4
Aqoxy5G02237 Aquilegia oxysepala HOM05D008093 ORTHO05D009840 1.8e-10 69.3 95 44.2
MD02G1150700 Malus domestica HOM05D008093 ORTHO05D009840 1.8e-10 69.3 102 47.1
Gohir.D04G022800 Gossypium hirsutum HOM05D008093 ORTHO05D009840 2.3e-10 68.9 53 60.4
Prupe.7G152300 Prunus persica HOM05D008093 ORTHO05D009840 3.0e-10 68.6 82 48.8
AUR62006838 Chenopodium quinoa HOM05D008093 ORTHO05D009840 4.0e-10 68.2 96 43.8
MELO3C023245.2 Cucumis melo HOM05D008093 ORTHO05D009840 4.0e-10 68.2 90 46.7
MBI06_g29669_MAGBIO Magnolia biondii HOM05D008093 ORTHO05D009840 5.2e-10 67.8 87 44.8
Cc07_g18370 Coffea canephora HOM05D008093 ORTHO05D009840 8.8e-10 67.0 87 43.7
FAN23G2512 Fragaria x ananassa HOM05D008093 ORTHO05D009840 1.2e-09 66.6 56 58.9
QL06p028768 Quercus lobata HOM05D008093 ORTHO05D009840 1.2e-09 66.6 53 60.4
Sc09g0002370 Simmondsia chinensis HOM05D008093 ORTHO05D009840 1.2e-09 66.6 101 42.6
Ciclev10002949m.g Citrus clementina HOM05D008093 ORTHO05D009840 1.5e-09 66.2 89 43.8
arahy.Tifrunner.gnm1.ann1.Y5JHNR Arachis hypogaea HOM05D008093 ORTHO05D009840 2.6e-09 65.5 44 70.5
FAN19G1201 Fragaria x ananassa HOM05D008093 ORTHO05D009840 3.4e-09 65.1 56 58.9
Os12g0187800 Oryza sativa ssp. japonica HOM05D008093 ORTHO05D009840 4.4e-09 64.7 53 56.6
GSVIVG01026494001 Vitis vinifera HOM05D008093 ORTHO05D009840 5.7e-09 64.3 76 46.1
THA.LOC104819498 Tarenaya hassleriana HOM05D010996 ORTHO05D009840 9.8e-09 63.5 91 39.6
Zm00001eb138530 Zea mays HOM05D008093 ORTHO05D009840 2.2e-08 62.4 49 57.1
ATR1136G205 Amborella trichopoda HOM05D008093 ORTHO05D009840 2.8e-08 62.0 89 40.4
Zm00001eb409100 Zea mays HOM05D008093 ORTHO05D009840 2.8e-08 62.0 61 49.2
A03p62020 Brassica napus HOM05D010996 ORTHO05D009840 8.3e-08 60.5 93 41.9
BraA03t15242Z Brassica rapa HOM05D010996 ORTHO05D009840 8.3e-08 60.5 93 41.9
Eucgr.L03270 Eucalyptus grandis HOM05D008093 ORTHO05D009840 1.8e-07 59.3 93 41.9
Nitab4.5_0002667g0090 Nicotiana tabacum HOM05D008093 ORTHO05D009840 4.1e-07 58.2 89 42.7
Thhalv10026675m.g Eutrema salsugineum HOM05D010996 ORTHO05D009840 9.2e-07 57.0 94 42.6
BcaNung05339 Brassica carinata HOM05D000119 ORTHO05D000054 1.2e-06 56.6 63 44.4
TPR.G6325 Trifolium pratense HOM05D009255 ORTHO05D011239 1.2e-06 56.6 55 47.3
C07p59670 Brassica napus HOM05D010996 ORTHO05D009840 2.0e-06 55.8 93 41.9
Sp7g31170 Schrenkiella parvula HOM05D010996 ORTHO05D009840 2.0e-06 55.8 95 40.0
BcaC09g52160 Brassica carinata HOM05D010996 ORTHO05D009840 4.5e-06 54.7 94 37.2
Haze_25223 Corylus avellana HOM05D008093 ORTHO05D009840 4.5e-06 54.7 67 46.3


User provided reference genes

Program Settings