Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 9.6e-113 410.2 214 100.0
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 5.3e-63 245.0 216 68.1
Medtr8g096640 Medicago truncatula HOM05D007269 ORTHO05D008531 1.6e-59 233.4 214 65.0
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 1.5e-44 183.7 220 54.1
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 2.6e-41 172.9 216 51.4
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 7.5e-41 171.4 214 52.3
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 3.3e-36 156.0 219 49.3
VMungo0251G2992 Vigna mungo HOM05D031312 ORTHO05D008531 6.8e-26 121.7 175 48.6
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.3e-16 90.9 214 36.9
arahy.Tifrunner.gnm1.ann1.0J46GK Arachis hypogaea HOM05D031312 ORTHO05D008531 4.9e-16 89.0 172 44.2
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 2.4e-15 86.7 214 36.4
arahy.Tifrunner.gnm1.ann1.MRR6R9 Arachis hypogaea HOM05D031312 ORTHO05D008531 5.4e-15 85.5 162 44.4
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 7.1e-15 85.1 215 35.3
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 4.6e-14 82.4 218 33.9
Glyma.05G203500 Glycine max HOM05D031312 ORTHO05D008531 1.3e-13 80.9 162 42.0
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 1.7e-13 80.5 203 36.5
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 1.5e-12 77.4 217 30.0
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 3.3e-12 76.3 220 35.0
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 3.3e-12 76.3 202 35.1
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 3.3e-12 76.3 215 35.3
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 5.6e-12 75.5 228 33.8
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 5.6e-12 75.5 213 32.4
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 7.3e-12 75.1 209 34.0
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 2.8e-11 73.2 212 33.0
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 8.1e-11 71.6 200 37.0
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.4e-10 70.1 219 33.8
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.2e-10 68.9 228 36.0
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 2.0e-09 67.0 224 31.2
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 3.4e-09 66.2 223 35.9
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.4e-09 66.2 223 35.9
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.4e-09 66.2 223 35.9
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 4.4e-09 65.9 217 33.2
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 9.9e-09 64.7 222 30.6
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 9.9e-09 64.7 215 32.1
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 1.3e-08 64.3 213 28.2
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.9e-08 63.2 208 32.2
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 4.9e-08 62.4 223 31.8
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 4.9e-08 62.4 207 31.9
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.9e-08 62.4 211 31.8
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 8.4e-08 61.6 213 31.5
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 8.4e-08 61.6 137 35.8
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.1e-07 61.2 213 33.3
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 1.1e-07 61.2 236 28.8
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 1.4e-07 60.8 217 31.3
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.4e-07 60.8 228 27.2
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.4e-07 60.8 219 35.6
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.4e-07 60.8 208 31.7
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.4e-07 60.8 208 32.2
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 3.2e-07 59.7 234 29.5
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 3.2e-07 59.7 217 30.9
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 9.3e-07 58.2 224 29.0
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 1.2e-06 57.8 214 29.4
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 2.7e-06 56.6 222 28.8
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 3.5e-06 56.2 216 28.7
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 6.0e-06 55.5 248 27.4
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 6.0e-06 55.5 235 28.9


User provided reference genes

Program Settings