Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g035960 Pisum sativum HOM05D003830 ORTHO05D004446 7.4e-124 447.2 222 100.0
Psat3g121600 Pisum sativum HOM05D003830 ORTHO05D004446 4.6e-102 374.8 200 92.0
Psat4g118720 Pisum sativum HOM05D003830 ORTHO05D004446 7.4e-100 367.5 194 93.8
Psat5g094600 Pisum sativum HOM05D003830 ORTHO05D004446 1.6e-99 366.3 208 89.9
TPR.G22439 Trifolium pratense HOM05D003830 ORTHO05D004446 6.5e-80 301.2 227 71.4
Ca_16482_v3 Cicer arietinum L. HOM05D003830 ORTHO05D004446 3.2e-71 272.3 227 64.8
Glyma.11G248200 Glycine max HOM05D003830 ORTHO05D004446 3.7e-59 232.3 226 57.1
Glyma.18G009000 Glycine max HOM05D003830 ORTHO05D004446 2.3e-56 223.0 226 56.6
Phvul.001G259600 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 2.6e-52 209.5 222 52.7
Phvul.002G176100 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 9.2e-50 201.1 223 51.6
arahy.Tifrunner.gnm1.ann1.ZS76EK Arachis hypogaea HOM05D003830 ORTHO05D004446 3.9e-48 195.7 223 50.2
arahy.Tifrunner.gnm1.ann1.D6D033 Arachis hypogaea HOM05D003830 ORTHO05D004446 7.3e-47 191.4 222 50.0
VMungo0251G0774 Vigna mungo HOM05D003830 ORTHO05D004446 9.5e-47 191.0 222 50.5
Glyma.08G102200 Glycine max HOM05D003830 ORTHO05D004446 2.1e-46 189.9 222 51.4
Lalb_Chr11g0075701 Lupinus albus HOM05D003830 ORTHO05D004446 1.4e-45 187.2 225 50.7
VMungo1383G3029 Vigna mungo HOM05D003830 ORTHO05D004446 2.3e-45 186.4 220 49.1
Glyma.05G145400 Glycine max HOM05D003830 ORTHO05D004446 2.0e-41 173.3 222 49.5
Lalb_Chr08g0230701 Lupinus albus HOM05D003830 ORTHO05D004446 1.9e-39 166.8 223 48.9
Lj4g0001101 Lotus japonicus HOM05D003830 ORTHO05D004446 8.1e-38 161.4 218 45.0
arahy.Tifrunner.gnm1.ann1.MTFP9U Arachis hypogaea HOM05D003830 ORTHO05D004446 4.1e-34 149.1 195 46.7
arahy.Tifrunner.gnm1.ann1.JB8DT0 Arachis hypogaea HOM05D003830 ORTHO05D004446 6.0e-33 145.2 197 47.2
Lalb_Chr23g0277961 Lupinus albus HOM05D003830 ORTHO05D004446 1.1e-31 141.0 224 43.8
Manes.12G014700 Manihot esculenta HOM05D003830 ORTHO05D004446 6.4e-27 125.2 180 40.6
Prupe.1G233200 Prunus persica HOM05D003830 ORTHO05D004446 1.6e-25 120.6 223 38.6
FvH4_4g24320 Fragaria vesca HOM05D003830 ORTHO05D004446 3.5e-25 119.4 221 36.2
MD16G1111800 Malus domestica HOM05D003830 ORTHO05D004446 3.5e-25 119.4 211 37.0
FAN17G1537 Fragaria x ananassa HOM05D003830 ORTHO05D004446 7.8e-25 118.2 221 35.7
FAN12G3820 Fragaria x ananassa HOM05D003830 ORTHO05D004446 1.3e-24 117.5 228 36.0
MD13G1112200 Malus domestica HOM05D003830 ORTHO05D004446 1.3e-24 117.5 183 38.8
QL03p054734 Quercus lobata HOM05D003830 ORTHO05D004446 3.0e-24 116.3 224 35.7
RcHm_v2.0_Chr4g0431121 Rosa chinensis HOM05D003830 ORTHO05D004446 1.9e-23 113.6 174 40.8
Potri.008G178600 Populus trichocarpa HOM05D003830 ORTHO05D004446 5.6e-23 112.1 180 36.7
Thecc.02G274300 Theobroma cacao HOM05D003830 ORTHO05D004446 2.8e-22 109.8 196 37.8
CANSAT01G2001 Cannabis sativa HOM05D003830 ORTHO05D004446 3.6e-22 109.4 164 40.9
FAN22G2024 Fragaria x ananassa HOM05D003830 ORTHO05D004446 8.1e-22 108.2 228 33.8
ClCG08G017300 Citrullus lanatus HOM05D003830 ORTHO05D004446 1.4e-21 107.5 176 39.2
Potri.010G056200 Populus trichocarpa HOM05D003830 ORTHO05D004446 2.4e-21 106.7 180 35.6
MELO3C010729.2 Cucumis melo HOM05D003830 ORTHO05D004446 3.1e-21 106.3 186 37.6
CiPaw.05G115100 Carya illinoinensis HOM05D003830 ORTHO05D004446 6.9e-21 105.1 216 36.1
Dinv10992 Davidia involucrata HOM05D003830 ORTHO05D004446 8.9e-21 104.8 225 33.3
Sabra10G0048900 Salix brachista HOM05D003830 ORTHO05D004446 1.5e-20 104.0 235 32.3
Gohir.A03G128600 Gossypium hirsutum HOM05D003830 ORTHO05D004446 2.6e-20 103.2 192 36.5
Gohir.D02G152400 Gossypium hirsutum HOM05D003830 ORTHO05D004446 2.6e-20 103.2 220 32.7
Gorai.005G171400 Gossypium raimondii HOM05D003830 ORTHO05D004446 3.4e-20 102.8 194 36.1
Manes.13G015800 Manihot esculenta HOM05D003830 ORTHO05D004446 4.4e-20 102.4 222 32.9
TWI75G0226 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 4.4e-20 102.4 206 34.5
CsaV3_2G025330 Cucumis sativus L. HOM05D003830 ORTHO05D004446 7.6e-20 101.7 198 36.9
Duzib268G1283 Durio zibethinus HOM05D003830 ORTHO05D004446 1.3e-19 100.9 183 34.4
Sabra08G0136300 Salix brachista HOM05D003830 ORTHO05D004446 1.7e-19 100.5 191 33.5
Dinv14800 Davidia involucrata HOM05D003830 ORTHO05D004446 2.2e-19 100.1 182 33.5
GSVIVG01010345001 Vitis vinifera HOM05D003830 ORTHO05D004446 6.4e-19 98.6 179 34.6
COL.COLO4_23621 Corchorus olitorius HOM05D003830 ORTHO05D004446 1.4e-18 97.4 183 36.6
Cfa009315 Carpinus fangiana HOM05D003830 ORTHO05D008363 1.9e-18 97.1 167 36.5
CSS0000134 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 2.4e-18 96.7 225 31.6
Duzib251G0504 Durio zibethinus HOM05D003830 ORTHO05D004446 1.6e-17 94.0 182 33.5
TWI36G0084 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 1.6e-17 94.0 187 35.3
TWI18G0501 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 2.1e-17 93.6 234 31.6
Atru.chr11.2246 Acer truncatum HOM05D003830 ORTHO05D004446 6.0e-17 92.0 168 37.5
Atru.chr11.2261 Acer truncatum HOM05D003830 ORTHO05D004446 6.0e-17 92.0 168 37.5
TAR629G0808 Trochodendron aralioides HOM05D003830 ORTHO05D004446 1.0e-16 91.3 206 34.0
Ciclev10030548m.g Citrus clementina HOM05D003830 ORTHO05D004446 2.3e-16 90.1 197 32.0
Sed0027794 Sechium edule HOM05D003830 ORTHO05D004446 2.3e-16 90.1 228 32.0
Cc11_g16600 Coffea canephora HOM05D003830 ORTHO05D004446 8.7e-16 88.2 165 37.0
TAR622G0818 Trochodendron aralioides HOM05D003830 ORTHO05D004446 8.7e-16 88.2 212 30.7
Duzib248G1684 Durio zibethinus HOM05D003830 ORTHO05D004446 1.1e-15 87.8 189 33.3
Actinidia25761 Actinidia chinensis HOM05D003830 ORTHO05D004446 3.3e-15 86.3 174 31.6
Rhsim12G0031400 Rhododendron simsii HOM05D003830 ORTHO05D004446 1.6e-14 84.0 187 29.4
PGR102G1232 Punica granatum HOM05D003830 ORTHO05D004446 2.8e-14 83.2 184 33.7
TAR374G0580 Trochodendron aralioides HOM05D003830 ORTHO05D004446 3.6e-14 82.8 214 29.9
Aqoxy3G01454 Aquilegia oxysepala HOM05D003830 ORTHO05D004446 4.8e-14 82.4 185 34.1
Rhsim12G0030500 Rhododendron simsii HOM05D003830 ORTHO05D004446 4.8e-14 82.4 187 29.4
Cpa.g.c26951.1 Carica papaya HOM05D003830 ORTHO05D004446 1.8e-13 80.5 222 33.3
Sopen05g009770 Solanum pennellii HOM05D003830 ORTHO05D004446 4.0e-13 79.3 222 28.4
Nn3g16538 Nelumbo nucifera HOM05D003830 ORTHO05D004446 9.0e-13 78.2 205 27.8
Lj6C822T9 Lonicera japonica HOM05D003830 ORTHO05D004446 9.9e-12 74.7 219 27.9
vmacro01085 Vaccinium macrocarpon HOM05D003830 ORTHO05D004446 1.7e-11 73.9 185 26.5
Nitab4.5_0011772g0020 Nicotiana tabacum HOM05D003830 ORTHO05D004446 2.2e-11 73.6 168 30.4
Solyc05g014640.3 Solanum lycopersicum HOM05D003830 ORTHO05D004446 2.2e-11 73.6 222 27.5
Nn4g22404 Nelumbo nucifera HOM05D003830 ORTHO05D004446 2.9e-11 73.2 197 29.9
Eucgr.H04665 Eucalyptus grandis HOM05D003830 ORTHO05D004446 1.1e-10 71.2 175 29.7
Nitab4.5_0000240g0070 Nicotiana tabacum HOM05D003830 ORTHO05D004446 1.1e-10 71.2 190 28.9
Peaxi162Scf00128g00924 Petunia axillaris HOM05D003830 ORTHO05D004446 1.1e-10 71.2 234 26.1
PSO782G2541 Papaver somniferum HOM05D003830 ORTHO05D004446 9.3e-10 68.2 176 26.1
PSO063G3359 Papaver somniferum HOM05D003830 ORTHO05D004446 1.2e-09 67.8 176 26.1
Hma1.2p1_0167F.1_g073780 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 4.6e-09 65.9 140 30.7
Actinidia30674 Actinidia chinensis HOM05D003830 ORTHO05D004446 6.0e-09 65.5 170 30.0
AUR62005571 Chenopodium quinoa HOM05D003830 ORTHO05D004446 1.0e-08 64.7 173 27.7
Oeu038669.1 Olea europaea HOM05D003830 ORTHO05D004446 1.0e-08 64.7 166 28.9
CAN.G692.1 Capsicum annuum HOM05D003830 ORTHO05D004446 2.3e-08 63.5 180 26.7
AUR62024159 Chenopodium quinoa HOM05D003830 ORTHO05D004446 3.9e-08 62.8 151 29.8
Oeu041685.1 Olea europaea HOM05D003830 ORTHO05D004446 6.7e-08 62.0 166 27.7
PGSC0003DMG400017461 Solanum tuberosum HOM05D003830 ORTHO05D004446 6.7e-08 62.0 203 26.1
SalBow2G2689 Salvia bowleyana HOM05D003830 ORTHO05D004446 8.7e-08 61.6 227 26.4
Actinidia33257 Actinidia chinensis HOM05D003830 ORTHO05D004446 3.3e-07 59.7 204 24.5
THA.LOC104825519 Tarenaya hassleriana HOM05D003830 ORTHO05D004446 5.6e-07 58.9 151 29.8
CSS0032396 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 7.4e-07 58.5 66 43.9
EL10Ac6g13438 Beta vulgaris HOM05D003830 ORTHO05D004446 1.3e-06 57.8 213 26.8
Sc11g0000660 Simmondsia chinensis HOM05D003830 ORTHO05D004446 2.8e-06 56.6 139 30.2
ECA233G0646 Erigeron canadensis HOM05D003830 ORTHO05D004446 8.1e-06 55.1 177 29.4


User provided reference genes

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