Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g029840 Pisum sativum HOM05D000111 ORTHO05D001475 6.0e-67 257.3 123 100.0
Psat6g082880 Pisum sativum HOM05D000111 ORTHO05D001475 3.3e-49 198.4 119 83.2
Psat7g011320 Pisum sativum HOM05D000111 ORTHO05D001475 5.6e-41 171.0 108 78.7
Medtr8g012990 Medicago truncatula HOM05D000111 ORTHO05D026878 1.0e-29 133.7 106 62.3
TPR.G39146 Trifolium pratense HOM05D000111 ORTHO05D001475 9.3e-28 127.1 103 62.1
TPR.G31539 Trifolium pratense HOM05D000111 ORTHO05D001475 1.2e-27 126.7 103 63.1
Psat7g029800 Pisum sativum HOM05D000111 ORTHO05D001475 2.8e-24 115.5 81 71.6
Medtr2g046300 Medicago truncatula HOM05D000111 ORTHO05D001475 3.1e-23 112.1 107 57.9
Medtr2g046390 Medicago truncatula HOM05D000111 ORTHO05D001475 4.1e-23 111.7 106 56.6
TPR.G39235 Trifolium pratense HOM05D000111 ORTHO05D001475 8.8e-18 94.0 65 72.3
TPR.G32695 Trifolium pratense HOM05D000111 ORTHO05D001475 2.5e-17 92.4 65 70.8
TPR.G39682 Trifolium pratense HOM05D000111 ORTHO05D001475 7.4e-17 90.9 65 69.2
Psat7g004880 Pisum sativum HOM05D000111 ORTHO05D001475 2.8e-16 89.0 107 43.9
Psat0s2821g0040 Pisum sativum HOM05D000111 ORTHO05D001475 6.3e-16 87.8 107 43.0
TPR.G18481 Trifolium pratense HOM05D000111 ORTHO05D001475 8.2e-16 87.4 80 55.0
Lj2g0009948 Lotus japonicus HOM05D000111 ORTHO05D001475 3.1e-15 85.5 106 45.3
Lj3g0019844 Lotus japonicus HOM05D000111 ORTHO05D001475 2.6e-14 82.4 131 35.9
Lj4g0027164 Lotus japonicus HOM05D000111 ORTHO05D001475 5.9e-14 81.3 119 38.7
Psat7g011160 Pisum sativum HOM05D000111 ORTHO05D001475 1.0e-13 80.5 68 57.4
TPR.G32715 Trifolium pratense HOM05D000111 ORTHO05D001475 6.5e-13 77.8 65 58.5
Glyma.09G186600 Glycine max HOM05D000111 ORTHO05D001475 1.4e-12 76.6 111 36.9
Medtr8g104480 Medicago truncatula HOM05D000111 ORTHO05D001475 2.1e-11 72.8 89 46.1
Psat7g011480 Pisum sativum HOM05D000111 ORTHO05D022360 7.9e-11 70.9 56 58.9
Lj3g0013917 Lotus japonicus HOM05D000111 ORTHO05D001475 8.8e-10 67.4 91 39.6
Haze_08251 Corylus avellana HOM05D000111 ORTHO05D001475 1.5e-09 66.6 108 36.1
Haze_15906 Corylus avellana HOM05D000111 ORTHO05D000134 4.4e-09 65.1 110 34.5
AT5G05030 Arabidopsis thaliana HOM05D000111 ORTHO05D007071 1.7e-08 63.2 70 45.7
AL6G14730 Arabidopsis lyrata HOM05D000111 ORTHO05D007071 2.2e-08 62.8 72 44.4
Prupe.3G054100 Prunus persica HOM05D000111 ORTHO05D000134 3.7e-08 62.0 111 34.2
C09p65160 Brassica napus HOM05D000111 ORTHO05D007071 4.8e-08 61.6 63 49.2
BolC9t59345H Brassica oleracea HOM05D000111 ORTHO05D007071 4.8e-08 61.6 63 49.2
Sp6g39360 Schrenkiella parvula HOM05D000111 ORTHO05D007071 8.2e-08 60.8 71 45.1
A10p26070 Brassica napus HOM05D000111 ORTHO05D007071 1.1e-07 60.5 63 49.2
C03p02480 Brassica napus HOM05D000111 ORTHO05D007071 1.1e-07 60.5 83 39.8
C09p65110 Brassica napus HOM05D000111 ORTHO05D007071 1.1e-07 60.5 63 46.0
BolC3t12799H Brassica oleracea HOM05D000111 ORTHO05D007071 1.1e-07 60.5 83 39.8
BolC9t59340H Brassica oleracea HOM05D000111 ORTHO05D007071 1.1e-07 60.5 63 46.0
BolC9t59343H Brassica oleracea HOM05D000111 ORTHO05D007071 1.1e-07 60.5 63 49.2
BraA10t44667Z Brassica rapa HOM05D000111 ORTHO05D007071 1.1e-07 60.5 63 49.2
A03p02170 Brassica napus HOM05D000111 ORTHO05D007071 1.4e-07 60.1 72 41.7
A10p26050 Brassica napus HOM05D000111 ORTHO05D007071 1.4e-07 60.1 63 47.6
C02p48940 Brassica napus HOM05D000111 ORTHO05D007071 1.4e-07 60.1 74 39.2
BolC2t10989H Brassica oleracea HOM05D000111 ORTHO05D007071 1.4e-07 60.1 74 39.2
BraA10t44665Z Brassica rapa HOM05D000111 ORTHO05D007071 1.4e-07 60.1 63 47.6
PSO210G0687 Papaver somniferum HOM05D000111 ORTHO05D001334 1.8e-07 59.7 62 48.4
VMungo0647G1383 Vigna mungo HOM05D000111 ORTHO05D001475 1.8e-07 59.7 88 38.6
BcaB05g21525 Brassica carinata HOM05D000111 ORTHO05D007071 2.4e-07 59.3 102 32.4
C09p65130 Brassica napus HOM05D000111 ORTHO05D007071 2.4e-07 59.3 63 44.4
Carub.0004s0868 Capsella rubella HOM05D000111 ORTHO05D001475 2.4e-07 59.3 66 48.5
CARHR274050 Cardamine hirsuta HOM05D000111 ORTHO05D007071 2.4e-07 59.3 88 35.2
Aqoxy4G02615 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 3.1e-07 58.9 95 33.7
Haze_10974 Corylus avellana HOM05D000111 ORTHO05D000134 3.1e-07 58.9 105 33.3
PSO675G1554 Papaver somniferum HOM05D000111 ORTHO05D001475 3.1e-07 58.9 114 33.3
Carub.0006s0397 Capsella rubella HOM05D000111 ORTHO05D007071 4.1e-07 58.5 72 43.1
CARHR208240 Cardamine hirsuta HOM05D000111 ORTHO05D007071 4.1e-07 58.5 63 46.0
Cpa.g.sc21.187 Carica papaya HOM05D000111 ORTHO05D001334 4.1e-07 58.5 64 46.9
A02p00190 Brassica napus HOM05D000111 ORTHO05D007071 5.3e-07 58.2 102 31.4
BraA02t05003Z Brassica rapa HOM05D000111 ORTHO05D007071 5.3e-07 58.2 102 31.4
BraA02t08163Z Brassica rapa HOM05D000111 ORTHO05D007071 5.3e-07 58.2 61 42.6
Carub.0002s1096 Capsella rubella HOM05D000111 ORTHO05D007071 5.3e-07 58.2 66 42.4
CARHR130790 Cardamine hirsuta HOM05D000111 ORTHO05D007071 5.3e-07 58.2 74 40.5
Haze_15899 Corylus avellana HOM05D000111 ORTHO05D000134 5.3e-07 58.2 105 32.4
Thhalv10015383m.g Eutrema salsugineum HOM05D000111 ORTHO05D007071 5.3e-07 58.2 63 42.9
Aqoxy1G01091 Aquilegia oxysepala HOM05D000111 ORTHO05D000134 7.0e-07 57.8 62 46.8
AT5G25410 Arabidopsis thaliana HOM05D000111 ORTHO05D007071 7.0e-07 57.8 74 36.5
AT5G46820 Arabidopsis thaliana HOM05D000111 ORTHO05D011603 7.0e-07 57.8 80 38.8
BcaB01g05727 Brassica carinata HOM05D000111 ORTHO05D007071 7.0e-07 57.8 61 44.3
Ciclev10027076m.g Citrus clementina HOM05D000111 ORTHO05D000134 7.0e-07 57.8 116 34.5
TPR.G37605 Trifolium pratense HOM05D000111 ORTHO05D001475 7.0e-07 57.8 117 39.3
AL4G35260 Arabidopsis lyrata HOM05D000111 ORTHO05D001475 9.1e-07 57.4 82 39.0
MBI16_g31345_MAGBIO Magnolia biondii HOM05D000111 ORTHO05D000134 9.1e-07 57.4 64 50.0
THA.LOC104806704 Tarenaya hassleriana HOM05D000111 ORTHO05D001475 9.1e-07 57.4 105 29.5
AUR62016052 Chenopodium quinoa HOM05D000111 ORTHO05D001475 1.2e-06 57.0 125 32.0
Ciclev10027524m.g Citrus clementina HOM05D000111 ORTHO05D000134 1.2e-06 57.0 115 33.0
Duzib235G0775 Durio zibethinus HOM05D000111 ORTHO05D000134 1.2e-06 57.0 74 39.2
Thhalv10005654m.g Eutrema salsugineum HOM05D000111 ORTHO05D007071 1.2e-06 57.0 72 41.7
Thhalv10015555m.g Eutrema salsugineum HOM05D000111 ORTHO05D007071 1.2e-06 57.0 71 39.4
Aqoxy3G03203 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 1.5e-06 56.6 125 33.6
CDE05G2028 Ceratophyllum demersum HOM05D000111 ORTHO05D000134 1.5e-06 56.6 84 39.3
Gorai.004G288100 Gossypium raimondii HOM05D000111 ORTHO05D000134 1.5e-06 56.6 73 39.7
PSO017G4222 Papaver somniferum HOM05D000111 ORTHO05D001475 1.5e-06 56.6 101 32.7
PSO170G5759 Papaver somniferum HOM05D000111 ORTHO05D001475 1.5e-06 56.6 74 36.5
TAR636G2154 Trochodendron aralioides HOM05D000111 ORTHO05D001475 1.5e-06 56.6 122 29.5
AL4G35290 Arabidopsis lyrata HOM05D000111 ORTHO05D001475 2.0e-06 56.2 80 37.5
AT2G38255 Arabidopsis thaliana HOM05D000111 ORTHO05D001475 2.0e-06 56.2 55 49.1
BolC3t14930H Brassica oleracea HOM05D000111 ORTHO05D001475 2.0e-06 56.2 125 32.8
BraA03t11381Z Brassica rapa HOM05D000111 ORTHO05D001475 2.0e-06 56.2 125 32.8
Carub.0006s0122 Capsella rubella HOM05D000111 ORTHO05D007071 2.0e-06 56.2 62 41.9
Carub.0006s0373 Capsella rubella HOM05D000111 ORTHO05D007071 2.0e-06 56.2 72 40.3
Carub.0008s0110 Capsella rubella HOM05D000111 ORTHO05D011603 2.0e-06 56.2 82 37.8
CARHR224190 Cardamine hirsuta HOM05D000111 ORTHO05D001475 2.0e-06 56.2 70 42.9
TAR629G1416 Trochodendron aralioides HOM05D000111 ORTHO05D000134 2.0e-06 56.2 101 33.7
TAR636G3022 Trochodendron aralioides HOM05D000111 ORTHO05D000134 2.0e-06 56.2 97 34.0
GSVIVG01011532001 Vitis vinifera HOM05D000111 ORTHO05D000134 2.0e-06 56.2 67 40.3
Atru.chr1.3603 Acer truncatum HOM05D000111 ORTHO05D000134 2.6e-06 55.8 109 33.0
BcaC01g05525 Brassica carinata HOM05D000111 ORTHO05D001475 2.6e-06 55.8 82 39.0
BcaC02g07721 Brassica carinata HOM05D000111 ORTHO05D001475 2.6e-06 55.8 77 36.4
A03p21450 Brassica napus HOM05D000111 ORTHO05D001475 2.6e-06 55.8 82 39.0
C03p25360 Brassica napus HOM05D000111 ORTHO05D001475 2.6e-06 55.8 82 39.0
BolC4t27908H Brassica oleracea HOM05D000111 ORTHO05D001475 2.6e-06 55.8 77 36.4
CARHR187530 Cardamine hirsuta HOM05D000111 ORTHO05D007071 2.6e-06 55.8 74 36.5
CDE04G3161 Ceratophyllum demersum HOM05D002159 ORTHO05D007297 2.6e-06 55.8 73 42.5
Manes.16G077400 Manihot esculenta HOM05D000111 ORTHO05D000134 2.6e-06 55.8 75 33.3
Phvul.008G240500 Phaseolus vulgaris HOM05D000111 ORTHO05D001475 2.6e-06 55.8 79 40.5
Sp4g20610 Schrenkiella parvula HOM05D000111 ORTHO05D001475 2.6e-06 55.8 63 46.0
TAR629G2288 Trochodendron aralioides HOM05D000111 ORTHO05D001334 2.6e-06 55.8 101 33.7
AL8G36990 Arabidopsis lyrata HOM05D000111 ORTHO05D007071 3.4e-06 55.5 61 42.6
BcaB07g29928 Brassica carinata HOM05D000111 ORTHO05D007071 3.4e-06 55.5 59 42.4
CARHR201560 Cardamine hirsuta HOM05D000111 ORTHO05D007071 3.4e-06 55.5 63 41.3
Cpa.g.sc42.103 Carica papaya HOM05D000111 ORTHO05D011255 3.4e-06 55.5 70 42.9
Ciclev10010192m.g Citrus clementina HOM05D000111 ORTHO05D000134 3.4e-06 55.5 75 40.0
Haze_15900 Corylus avellana HOM05D000111 ORTHO05D000134 3.4e-06 55.5 93 34.4
Duzib235G1190 Durio zibethinus HOM05D000111 ORTHO05D000134 3.4e-06 55.5 73 38.4
Eucgr.J03075 Eucalyptus grandis HOM05D000111 ORTHO05D000134 3.4e-06 55.5 123 30.9
PSO017G1614 Papaver somniferum HOM05D000111 ORTHO05D000134 3.4e-06 55.5 93 31.2
PSO063G4506 Papaver somniferum HOM05D000111 ORTHO05D001475 3.4e-06 55.5 118 32.2
Solyc08g080810.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 3.4e-06 55.5 127 32.3
GSVIVG01028932001 Vitis vinifera HOM05D000111 ORTHO05D000134 3.4e-06 55.5 66 50.0
Aqoxy2G02608 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 4.5e-06 55.1 104 34.6
A02p40020 Brassica napus HOM05D000111 ORTHO05D007071 4.5e-06 55.1 104 31.7
BraA02t08966Z Brassica rapa HOM05D000111 ORTHO05D007071 4.5e-06 55.1 104 31.7
BraA04t18184Z Brassica rapa HOM05D000111 ORTHO05D001475 4.5e-06 55.1 78 34.6
CARHR188130 Cardamine hirsuta HOM05D000111 ORTHO05D007071 4.5e-06 55.1 74 37.8
Cpa.g.sc131.15 Carica papaya HOM05D000111 ORTHO05D000134 4.5e-06 55.1 114 35.1
Duzib235G0562 Durio zibethinus HOM05D000111 ORTHO05D000134 4.5e-06 55.1 58 41.4
PSO017G5718 Papaver somniferum HOM05D000111 ORTHO05D001475 4.5e-06 55.1 115 30.4
Aqoxy1G03734 Aquilegia oxysepala HOM05D000111 ORTHO05D011255 5.9e-06 54.7 88 38.6
Haze_16110 Corylus avellana HOM05D000111 ORTHO05D000134 5.9e-06 54.7 105 31.4
Duzib235G0932 Durio zibethinus HOM05D000111 ORTHO05D000134 5.9e-06 54.7 58 43.1
LjContig00141g0004017 Lotus japonicus HOM05D000111 ORTHO05D001475 5.9e-06 54.7 83 39.8
PSO063G1002 Papaver somniferum HOM05D000111 ORTHO05D000134 5.9e-06 54.7 93 36.6
Phvul.008G240300 Phaseolus vulgaris HOM05D000111 ORTHO05D001475 5.9e-06 54.7 79 38.0
PGSC0003DMG400014762 Solanum tuberosum HOM05D000111 ORTHO05D001334 5.9e-06 54.7 82 41.5
PGSC0003DMG400029577 Solanum tuberosum HOM05D000111 ORTHO05D001334 5.9e-06 54.7 82 41.5
TAR624G0451 Trochodendron aralioides HOM05D000111 ORTHO05D000134 5.9e-06 54.7 65 47.7
Aqoxy3G02187 Aquilegia oxysepala HOM05D000111 ORTHO05D000134 7.7e-06 54.3 72 38.9
Aqoxy3G02363 Aquilegia oxysepala HOM05D000111 ORTHO05D001334 7.7e-06 54.3 110 32.7
Carub.0004s0870 Capsella rubella HOM05D000111 ORTHO05D001475 7.7e-06 54.3 55 49.1
Carub.0008s0170 Capsella rubella HOM05D000111 ORTHO05D007071 7.7e-06 54.3 63 41.3
CARHR224200 Cardamine hirsuta HOM05D000111 ORTHO05D001475 7.7e-06 54.3 54 48.1
CDE02G3634 Ceratophyllum demersum HOM05D000111 ORTHO05D000134 7.7e-06 54.3 92 33.7
CDE06G2085 Ceratophyllum demersum HOM05D000111 ORTHO05D000134 7.7e-06 54.3 84 39.3
AUR62022276 Chenopodium quinoa HOM05D000111 ORTHO05D000134 7.7e-06 54.3 67 38.8
Haze_08796 Corylus avellana HOM05D000111 ORTHO05D000134 7.7e-06 54.3 66 45.5
Eucgr.J03073 Eucalyptus grandis HOM05D000111 ORTHO05D000134 7.7e-06 54.3 128 32.8
Thhalv10017910m.g Eutrema salsugineum HOM05D000111 ORTHO05D001475 7.7e-06 54.3 78 35.9
MBI16_g28440_MAGBIO Magnolia biondii HOM05D000111 ORTHO05D000134 7.7e-06 54.3 64 51.6
PSO765G0077 Papaver somniferum HOM05D000111 ORTHO05D000134 7.7e-06 54.3 97 32.0
PGR102G0423 Punica granatum HOM05D000111 ORTHO05D000134 7.7e-06 54.3 63 42.9
PGR102G0597 Punica granatum HOM05D000111 ORTHO05D000134 7.7e-06 54.3 63 42.9
PGR102G2522 Punica granatum HOM05D000111 ORTHO05D000134 7.7e-06 54.3 63 42.9
QL04p013094 Quercus lobata HOM05D000111 ORTHO05D000134 7.7e-06 54.3 103 31.1
QL04p022509 Quercus lobata HOM05D000111 ORTHO05D000134 7.7e-06 54.3 72 43.1
Solyc08g080820.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 7.7e-06 54.3 127 30.7
THA.LOC104804783 Tarenaya hassleriana HOM05D000111 ORTHO05D000134 7.7e-06 54.3 75 40.0


User provided reference genes

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