Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 2.2e-202 708.8 368 100.0
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 1.1e-169 600.1 370 84.6
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 9.9e-166 587.0 372 82.8
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 7.8e-163 577.4 368 81.2
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 2.5e-145 519.2 373 74.5
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 1.8e-143 513.1 373 73.7
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 4.3e-137 491.9 371 72.5
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 4.3e-137 491.9 380 71.3
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 4.3e-137 491.9 369 71.5
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 1.1e-135 487.3 367 70.8
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 2.4e-135 486.1 371 71.2
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 3.1e-135 485.7 367 70.6
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 1.8e-119 433.3 374 64.7
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 3.1e-119 432.6 372 62.4
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 3.1e-119 432.6 373 63.8
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 3.4e-118 429.1 375 62.7
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 3.8e-117 425.6 371 62.3
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 5.0e-117 425.2 371 62.3
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 7.2e-116 421.4 372 61.8
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.6e-115 420.2 375 61.9
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 4.6e-115 418.7 375 61.1
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 2.3e-114 416.4 365 61.4
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 8.8e-114 414.5 380 61.3
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 3.3e-113 412.5 371 60.6
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 4.3e-113 412.1 376 61.7
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 1.3e-112 410.6 409 56.7
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.7e-112 410.2 373 61.4
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 2.2e-112 409.8 373 61.4
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 2.8e-112 409.5 369 59.3
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 8.2e-112 407.9 373 60.9
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 4.5e-110 402.1 380 59.5
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 7.7e-110 401.4 376 60.1
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 1.7e-109 400.2 367 61.3
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 1.7e-109 400.2 369 60.4
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 5.0e-109 398.7 374 58.6
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 8.5e-109 397.9 408 57.1
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.1e-108 397.5 377 59.9
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 1.4e-108 397.1 374 59.9
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 2.5e-108 396.4 373 60.1
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 3.2e-108 396.0 377 59.7
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 4.2e-108 395.6 374 60.2
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 7.2e-108 394.8 374 59.4
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 1.6e-107 393.7 375 59.5
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 1.6e-107 393.7 368 59.5
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 2.7e-107 392.9 369 59.6
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 2.7e-107 392.9 371 58.2
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 2.7e-107 392.9 367 60.2
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 4.7e-107 392.1 368 60.1
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 7.9e-107 391.3 368 60.1
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 1.8e-106 390.2 416 53.6
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 5.1e-106 388.7 373 59.2
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 5.1e-106 388.7 395 57.0
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 6.7e-106 388.3 372 57.8
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 6.7e-106 388.3 366 59.8
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 2.0e-105 386.7 417 54.0
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 2.0e-105 386.7 367 58.6
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 3.3e-105 386.0 374 56.4
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 7.4e-105 384.8 372 58.3
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 2.8e-104 382.9 362 57.2
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 4.8e-104 382.1 380 56.8
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 1.1e-103 380.9 367 57.5
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 1.4e-103 380.6 372 58.1
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 1.0e-101 374.4 381 55.6
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 1.0e-101 374.4 366 57.9
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 1.7e-101 373.6 380 56.8
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 1.7e-101 373.6 375 57.3
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 1.4e-100 370.5 378 56.3
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 1.4e-100 370.5 370 56.8
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 1.9e-100 370.2 386 53.9
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 1.9e-100 370.2 354 58.2
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 3.2e-100 369.4 375 57.6
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 4.2e-100 369.0 387 53.0
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 5.5e-100 368.6 383 55.9
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 5.5e-100 368.6 376 59.0
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 3.6e-99 365.9 395 54.4
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 3.6e-99 365.9 378 55.6
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 6.1e-99 365.2 375 56.0
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 6.7e-98 361.7 385 54.5
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 1.5e-97 360.5 390 54.9
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 4.4e-97 359.0 358 57.8
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 5.7e-97 358.6 389 53.7
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 1.3e-96 357.5 386 53.4
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 1.3e-96 357.5 392 54.1
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 1.7e-96 357.1 368 54.9
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 2.8e-96 356.3 393 54.7
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 2.4e-95 353.2 402 53.0
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 4.1e-95 352.4 394 53.6
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 1.2e-94 350.9 411 53.0
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 5.9e-94 348.6 403 51.4
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 7.7e-94 348.2 410 52.2
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 7.7e-94 348.2 372 55.4
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 2.9e-93 346.3 407 51.1
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 8.5e-93 344.7 391 51.7
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 1.5e-92 344.0 409 51.8
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 2.5e-92 343.2 398 52.3
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 3.2e-92 342.8 411 49.6
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 5.5e-92 342.0 415 50.1
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 5.5e-92 342.0 413 51.8
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 9.4e-92 341.3 414 50.7
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 1.8e-90 337.0 392 51.5
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 4.0e-90 335.9 409 51.1
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 5.2e-90 335.5 412 51.2
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 8.8e-90 334.7 373 54.4
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 1.1e-84 317.8 364 53.3
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 3.6e-83 312.8 321 56.1
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 4.0e-82 309.3 403 47.6
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 1.5e-81 307.4 369 49.9
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 1.3e-80 304.3 372 52.4
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 2.2e-80 303.5 434 44.2
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 6.3e-80 302.0 370 51.4
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 1.9e-76 290.4 330 53.9
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 2.5e-68 263.5 309 50.8
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 8.9e-50 201.8 360 39.4
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 1.5e-49 201.1 276 46.4
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 9.9e-49 198.4 409 37.2
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 4.9e-48 196.1 483 33.7
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 2.4e-47 193.7 207 52.2
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 2.4e-47 193.7 207 52.2
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 2.4e-47 193.7 207 52.2
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 6.6e-45 185.7 296 40.5
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 5.8e-41 172.6 532 30.6
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 2.1e-38 164.1 143 62.2
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 8.1e-35 152.1 143 57.3
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 1.4e-34 151.4 169 52.7
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 9.9e-33 145.2 366 34.4
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 1.7e-32 144.4 143 56.6
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 4.9e-32 142.9 192 49.5
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 6.4e-32 142.5 401 31.2
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 6.9e-26 122.5 309 33.3
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 2.8e-19 100.5 373 27.9
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 2.8e-19 100.5 373 27.9
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 1.1e-18 98.6 176 40.3
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 6.4e-16 89.4 113 46.9
ClCG01G002340 Citrullus lanatus HOM05D005438 ORTHO05D006744 2.1e-14 84.3 111 45.0
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 7.4e-12 75.9 45 75.6
MCO11G547 Micromonas commoda HOM05D005438 ORTHO05D006744 2.7e-06 57.4 318 24.5


User provided reference genes

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