Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 5.4e-44 180.6 94 100.0
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 8.4e-29 130.2 94 71.3
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 1.3e-26 122.9 92 71.7
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 3.9e-26 121.3 93 69.9
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 3.9e-26 121.3 93 71.0
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 3.9e-26 121.3 92 70.7
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 6.7e-26 120.6 92 69.6
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 6.7e-26 120.6 92 69.6
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 8.7e-26 120.2 92 69.6
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 1.1e-25 119.8 92 68.5
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 1.5e-25 119.4 93 69.9
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.5e-25 119.4 92 69.6
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.5e-25 119.4 92 69.6
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.3e-25 118.2 92 68.5
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 5.6e-25 117.5 92 67.4
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 9.6e-25 116.7 93 66.7
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 1.3e-24 116.3 95 68.4
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 2.1e-24 115.5 94 66.0
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 2.1e-24 115.5 92 65.2
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 2.8e-24 115.2 92 66.3
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 3.7e-24 114.8 95 65.3
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 4.8e-24 114.4 92 67.4
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 4.8e-24 114.4 92 65.2
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 4.8e-24 114.4 92 65.2
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 6.2e-24 114.0 92 64.1
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.1e-23 113.2 92 64.1
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 1.1e-23 113.2 92 66.3
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.1e-23 113.2 92 65.2
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.4e-23 112.8 94 64.9
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.4e-23 112.8 92 64.1
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.8e-23 112.5 89 65.2
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 3.1e-23 111.7 92 65.2
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.0e-23 111.3 94 62.8
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 5.3e-23 110.9 92 64.1
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 6.9e-23 110.5 92 63.0
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 9.0e-23 110.2 86 67.4
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 9.0e-23 110.2 94 62.8
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 1.2e-22 109.8 93 63.4
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.0e-22 109.0 91 62.6
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 2.6e-22 108.6 92 62.0
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 2.6e-22 108.6 92 63.0
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 3.4e-22 108.2 92 64.1
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 3.4e-22 108.2 92 63.0
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 4.5e-22 107.8 92 62.0
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 7.6e-22 107.1 80 68.8
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 7.6e-22 107.1 84 64.3
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 7.6e-22 107.1 84 64.3
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.3e-21 106.3 84 66.7
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 1.3e-21 106.3 90 61.1
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.7e-21 105.9 92 62.0
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 2.2e-21 105.5 84 63.1
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.2e-21 105.5 93 60.2
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.2e-21 105.5 93 60.2
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 2.2e-21 105.5 87 64.4
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 2.9e-21 105.1 92 60.9
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 4.9e-21 104.4 84 61.9
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 4.9e-21 104.4 90 60.0
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 6.5e-21 104.0 94 63.8
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 6.5e-21 104.0 92 59.8
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 6.5e-21 104.0 92 59.8
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 6.5e-21 104.0 92 59.8
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 6.5e-21 104.0 84 61.9
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 8.4e-21 103.6 92 60.9
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.1e-20 103.2 90 58.9
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.4e-20 102.8 84 63.1
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 1.9e-20 102.4 92 60.9
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 2.5e-20 102.1 93 60.2
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 4.2e-20 101.3 84 65.5
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 5.5e-20 100.9 92 56.5
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 5.5e-20 100.9 85 58.8
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 5.5e-20 100.9 93 55.9
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 7.1e-20 100.5 92 58.7
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 1.2e-19 99.8 84 65.5
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 1.6e-19 99.4 88 55.7
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.6e-19 99.4 84 60.7
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 1.0e-18 96.7 95 58.9
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 1.0e-18 96.7 94 56.4
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 1.3e-18 96.3 70 74.3
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 1.3e-18 96.3 89 53.9
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.1e-18 94.4 94 54.3
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 5.1e-18 94.4 82 58.5
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 5.1e-18 94.4 84 61.9
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 1.1e-17 93.2 95 54.7
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.1e-17 93.2 95 54.7
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.1e-17 93.2 95 54.7
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 1.9e-17 92.4 85 58.8
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.8e-16 88.6 67 64.2
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.8e-16 88.6 66 71.2
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 3.7e-16 88.2 81 58.0
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.1e-15 86.7 74 58.1
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.4e-15 86.3 91 50.5
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.4e-15 86.3 91 50.5
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 1.4e-15 86.3 82 56.1
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 1.4e-15 86.3 90 53.3
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 4.1e-15 84.7 82 56.1
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 5.3e-15 84.3 75 58.7
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 6.9e-15 84.0 94 50.0
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 6.9e-15 84.0 94 50.0
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 6.9e-15 84.0 94 50.0
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 6.9e-15 84.0 94 50.0
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 4.5e-14 81.3 84 52.4
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.5e-14 81.3 123 41.5
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.9e-14 80.9 67 61.2
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 5.0e-13 77.8 84 46.4
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 6.1e-11 70.9 67 58.2
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 3.9e-10 68.2 67 56.7
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 9.7e-09 63.5 50 66.0
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.3e-08 63.2 95 42.1


User provided reference genes

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