Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g024920 Pisum sativum HOM05D001889 ORTHO05D001853 9.7e-46 186.8 120 100.0
Psat7g024960 Pisum sativum HOM05D001889 ORTHO05D001853 1.5e-43 179.5 119 96.6
Medtr8g099650 Medicago truncatula HOM05D001889 ORTHO05D001853 4.5e-35 151.4 119 86.6
Ca_17466_v3 Cicer arietinum L. HOM05D001889 ORTHO05D001853 3.9e-31 138.3 120 79.2
TPR.G3382 Trifolium pratense HOM05D001889 ORTHO05D001853 1.5e-30 136.3 119 77.3
Phvul.002G300000 Phaseolus vulgaris HOM05D001889 ORTHO05D001853 1.6e-24 116.3 119 66.4
Glyma.05G218100 Glycine max HOM05D001889 ORTHO05D001853 8.0e-24 114.0 119 70.6
Lj4g0003743 Lotus japonicus HOM05D001889 ORTHO05D001853 1.4e-23 113.2 117 59.0
arahy.Tifrunner.gnm1.ann1.VRDQ1B Arachis hypogaea HOM05D001889 ORTHO05D001853 1.8e-23 112.8 119 52.1
Lalb_Chr09g0332241 Lupinus albus HOM05D001889 ORTHO05D001853 3.0e-23 112.1 118 63.6
arahy.Tifrunner.gnm1.ann1.18SJMB Arachis hypogaea HOM05D001889 ORTHO05D001853 5.2e-23 111.3 119 51.3
Glyma.08G024200 Glycine max HOM05D001889 ORTHO05D001853 1.2e-22 110.2 119 67.2
VMungo0251G0223 Vigna mungo HOM05D001889 ORTHO05D001853 5.7e-22 107.8 119 58.0
MD06G1110000 Malus domestica HOM05D001889 ORTHO05D001853 6.3e-21 104.4 117 46.2
MD14G1131000 Malus domestica HOM05D001889 ORTHO05D001853 1.4e-20 103.2 117 46.2
Prupe.5G122900 Prunus persica HOM05D001889 ORTHO05D001853 7.0e-20 100.9 117 53.8
RcHm_v2.0_Chr7g0194131 Rosa chinensis HOM05D001889 ORTHO05D001853 2.7e-19 99.0 117 53.8
FAN18G0531 Fragaria x ananassa HOM05D001889 ORTHO05D001853 5.9e-19 97.8 117 43.6
FAN18G4029 Fragaria x ananassa HOM05D001889 ORTHO05D001853 1.0e-18 97.1 117 43.6
FvH4_5g04940 Fragaria vesca HOM05D001889 ORTHO05D001853 1.3e-18 96.7 117 43.6
FAN13G2042 Fragaria x ananassa HOM05D001889 ORTHO05D001853 1.3e-18 96.7 117 47.0
Haze_09091 Corylus avellana HOM05D001889 ORTHO05D001853 2.2e-18 95.9 117 60.7
CiPaw.11G119000 Carya illinoinensis HOM05D001889 ORTHO05D001853 2.9e-18 95.5 117 48.7
CANSAT21G0525 Cannabis sativa HOM05D001889 ORTHO05D001853 3.8e-18 95.1 117 53.8
Sed0020938 Sechium edule HOM05D001889 ORTHO05D001853 3.8e-18 95.1 119 57.1
ClCG07G011480 Citrullus lanatus HOM05D001889 ORTHO05D001853 6.5e-18 94.4 117 42.7
Cfa011982 Carpinus fangiana HOM05D001889 ORTHO05D001853 1.9e-17 92.8 117 58.1
FAN04G1520 Fragaria x ananassa HOM05D001889 ORTHO05D001853 1.9e-17 92.8 117 41.9
Actinidia22175 Actinidia chinensis HOM05D001889 ORTHO05D001853 2.5e-17 92.4 117 52.1
Ciclev10023952m.g Citrus clementina HOM05D001889 ORTHO05D001853 9.4e-17 90.5 116 54.3
QL02p030019 Quercus lobata HOM05D001889 ORTHO05D001853 1.2e-16 90.1 117 49.6
CsaV3_4G006740 Cucumis sativus L. HOM05D001889 ORTHO05D001853 2.1e-16 89.4 117 47.0
Nitab4.5_0008496g0020 Nicotiana tabacum HOM05D001889 ORTHO05D001853 4.7e-16 88.2 117 48.7
Cpa.g.sc634.3 Carica papaya HOM05D001889 ORTHO05D001853 1.0e-15 87.0 119 52.1
CAN.G567.15 Capsicum annuum HOM05D001889 ORTHO05D001853 1.8e-15 86.3 118 48.3
PGR042G3002 Punica granatum HOM05D001889 ORTHO05D001853 1.8e-15 86.3 115 47.8
TPR.G29353 Trifolium pratense HOM05D001889 ORTHO05D001853 1.8e-15 86.3 60 76.7
PGSC0003DMG400012264 Solanum tuberosum HOM05D001889 ORTHO05D001853 3.0e-15 85.5 118 43.2
Nitab4.5_0000798g0110 Nicotiana tabacum HOM05D001889 ORTHO05D001853 4.0e-15 85.1 118 49.2
SalBow1G7974 Salvia bowleyana HOM05D001889 ORTHO05D001853 4.0e-15 85.1 117 46.2
AT4G10920 Arabidopsis thaliana HOM05D001889 ORTHO05D001853 5.2e-15 84.7 117 40.2
Sc22g0004890 Simmondsia chinensis HOM05D001889 ORTHO05D001853 5.2e-15 84.7 120 50.8
Dinv37513 Davidia involucrata HOM05D001889 ORTHO05D001853 6.8e-15 84.3 121 47.9
Thhalv10029021m.g Eutrema salsugineum HOM05D001889 ORTHO05D001853 6.8e-15 84.3 118 51.7
Sopen08g030830 Solanum pennellii HOM05D001889 ORTHO05D001853 6.8e-15 84.3 122 45.9
GSVIVG01019561001 Vitis vinifera HOM05D001889 ORTHO05D001853 6.8e-15 84.3 117 41.0
Ah.12g052720 Amaranthus hybridus HOM05D001889 ORTHO05D001853 8.8e-15 84.0 118 54.2
Hma1.2p1_0440F.1_g153470 Hydrangea macrophylla HOM05D001889 ORTHO05D001853 1.2e-14 83.6 129 52.7
Duzib068G1189 Durio zibethinus HOM05D001889 ORTHO05D001853 2.0e-14 82.8 117 47.0
Solyc08g082580.3 Solanum lycopersicum HOM05D001889 ORTHO05D001853 2.0e-14 82.8 123 40.7
TWI81G0658 Tripterygium wilfordii HOM05D001889 ORTHO05D001853 2.6e-14 82.4 123 38.2
Cc08_g16290 Coffea canephora HOM05D001889 ORTHO05D001853 3.4e-14 82.0 128 46.9
Lj2A163G58 Lonicera japonica HOM05D001889 ORTHO05D001853 4.4e-14 81.6 118 49.2
CARHR255690 Cardamine hirsuta HOM05D001889 ORTHO05D001853 7.5e-14 80.9 117 39.3
Oeu038552.2 Olea europaea HOM05D001889 ORTHO05D001853 7.5e-14 80.9 132 44.7
SGA_v2.0_scaffold305G47995 Striga asiatica HOM05D001889 ORTHO05D001853 7.5e-14 80.9 117 41.9
Aa31LG9G11200 Aethionema arabicum HOM05D001889 ORTHO05D001853 1.3e-13 80.1 117 45.3
Sp6g06580 Schrenkiella parvula HOM05D001889 ORTHO05D001853 1.3e-13 80.1 117 47.9
VMungo0540G2283 Vigna mungo HOM05D001889 ORTHO05D001853 1.3e-13 80.1 107 52.3
ATR0602G135 Amborella trichopoda HOM05D001889 ORTHO05D001853 2.2e-13 79.3 117 36.8
AL6G45010 Arabidopsis lyrata HOM05D001889 ORTHO05D001853 2.2e-13 79.3 117 41.0
CSS0033415 Camellia sinensis var. sinensis HOM05D001889 ORTHO05D001853 2.2e-13 79.3 124 46.0
Carub.0006s2966 Capsella rubella HOM05D001889 ORTHO05D001853 2.2e-13 79.3 115 48.7
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 3.7e-13 78.6 115 44.3
Peaxi162Scf00074g00634 Petunia axillaris HOM05D001889 ORTHO05D001853 3.7e-13 78.6 120 55.8
A03p29220 Brassica napus HOM05D001889 ORTHO05D001853 1.1e-12 77.0 117 46.2
BraA03t12117Z Brassica rapa HOM05D001889 ORTHO05D001853 1.1e-12 77.0 117 46.2
Migut.A00620 Erythranthe guttata HOM05D001889 ORTHO05D001853 1.1e-12 77.0 121 45.5
Nn3g18977 Nelumbo nucifera HOM05D001889 ORTHO05D001853 1.8e-12 76.3 125 40.0
Eucgr.E00884 Eucalyptus grandis HOM05D001889 ORTHO05D001853 2.4e-12 75.9 123 41.5
TAR375G1146 Trochodendron aralioides HOM05D001889 ORTHO05D001853 2.4e-12 75.9 122 41.0
BcaC01g04652 Brassica carinata HOM05D001889 ORTHO05D001853 4.1e-12 75.1 117 47.0
C03p35280 Brassica napus HOM05D001889 ORTHO05D001853 4.1e-12 75.1 117 43.6
BolC3t15839H Brassica oleracea HOM05D001889 ORTHO05D001853 4.1e-12 75.1 117 47.0
Manes.02G008100 Manihot esculenta HOM05D001889 ORTHO05D001853 4.1e-12 75.1 117 35.0
Thecc.03G300800 Theobroma cacao HOM05D001889 ORTHO05D001853 4.1e-12 75.1 117 38.5
HPP92_027159 Vanilla planifolia HOM05D001889 ORTHO05D001853 4.1e-12 75.1 125 43.2
EL10Ac5g12940 Beta vulgaris HOM05D001889 ORTHO05D001853 5.4e-12 74.7 123 48.8
MELO3C016275.2 Cucumis melo HOM05D001889 ORTHO05D001853 5.4e-12 74.7 102 40.2
Sabra01G0065500 Salix brachista HOM05D001889 ORTHO05D001853 5.4e-12 74.7 111 38.7
CDE10G1213 Ceratophyllum demersum HOM05D001889 ORTHO05D001853 7.0e-12 74.3 117 36.8
Rhsim02G0246500 Rhododendron simsii HOM05D001889 ORTHO05D001853 7.0e-12 74.3 129 35.7
unitig_748.g7694 Utricularia gibba HOM05D001889 ORTHO05D001853 7.0e-12 74.3 118 45.8
PSO384G4805 Papaver somniferum HOM05D001889 ORTHO05D001853 9.1e-12 73.9 137 47.4
Potri.001G089400 Populus trichocarpa HOM05D001889 ORTHO05D001853 9.1e-12 73.9 117 36.8
MSTRG.26916 Avicennia marina HOM05D001889 ORTHO05D001853 1.6e-11 73.2 119 46.2
Gohir.D03G084300 Gossypium hirsutum HOM05D001889 ORTHO05D001853 1.6e-11 73.2 117 38.5
Gorai.003G078300 Gossypium raimondii HOM05D001889 ORTHO05D001853 1.6e-11 73.2 117 38.5
BcaB01g02728 Brassica carinata HOM05D001889 ORTHO05D001853 2.0e-11 72.8 117 46.2
Gohir.A02G099400 Gossypium hirsutum HOM05D001889 ORTHO05D001853 5.9e-11 71.2 117 39.3
THA.LOC104806442 Tarenaya hassleriana HOM05D001889 ORTHO05D001853 5.9e-11 71.2 117 35.0
Aqoxy7G00073 Aquilegia oxysepala HOM05D001889 ORTHO05D001853 7.7e-11 70.9 132 44.7
Oeu055033.2 Olea europaea HOM05D001889 ORTHO05D001853 7.7e-11 70.9 118 44.9
TAR629G1262 Trochodendron aralioides HOM05D001889 ORTHO05D001853 1.0e-10 70.5 123 30.9
HanXRQChr17g0534971 Helianthus annuus HOM05D001889 ORTHO05D001853 2.3e-10 69.3 125 36.8
PSO135G1027 Papaver somniferum HOM05D001889 ORTHO05D001853 3.8e-10 68.6 125 38.4
CsaV3_3G007990 Cucumis sativus L. HOM05D001889 ORTHO05D001853 5.0e-10 68.2 116 34.5
HanXRQChr10g0313221 Helianthus annuus HOM05D001889 ORTHO05D001853 8.6e-10 67.4 123 35.0
Cfa003792 Carpinus fangiana HOM05D001889 ORTHO05D001853 1.1e-09 67.0 127 33.1
Sed0013045 Sechium edule HOM05D001889 ORTHO05D001853 1.1e-09 67.0 117 35.0
Lsat_1_v5_gn_3_11280 Lactuca sativa HOM05D001889 ORTHO05D001853 1.5e-09 66.6 125 38.4
MELO3C006017.2 Cucumis melo HOM05D001889 ORTHO05D001853 2.5e-09 65.9 116 31.9
Haze_15668 Corylus avellana HOM05D001889 ORTHO05D001853 5.5e-09 64.7 127 45.7
Lj1g0006055 Lotus japonicus HOM05D000005 ORTHO05D001853 7.2e-09 64.3 79 53.2
MD01G1082500 Malus domestica HOM05D001889 ORTHO05D001853 9.5e-09 63.9 116 32.8
Os01g0706000 Oryza sativa ssp. japonica HOM05D001889 ORTHO05D001853 1.2e-08 63.5 132 41.7
Prupe.2G189900 Prunus persica HOM05D001889 ORTHO05D001853 1.2e-08 63.5 116 32.8
Potri.002G171900 Populus trichocarpa HOM05D001889 ORTHO05D001853 1.6e-08 63.2 118 31.4
Lj1g0012362 Lotus japonicus HOM05D001889 ORTHO05D001853 3.6e-08 62.0 117 30.8
TPR.G4688 Trifolium pratense HOM05D001889 ORTHO05D001853 4.7e-08 61.6 117 35.0
Ciclev10020119m.g Citrus clementina HOM05D001889 ORTHO05D001853 8.0e-08 60.8 111 32.4
Zm00001eb361130 Zea mays HOM05D001889 ORTHO05D001853 8.0e-08 60.8 131 36.6
DCAR_018011 Daucus carota HOM05D001889 ORTHO05D001853 1.0e-07 60.5 105 47.6
Sabra02G0140800 Salix brachista HOM05D001889 ORTHO05D001853 1.4e-07 60.1 118 28.0
Eucgr.D01760 Eucalyptus grandis HOM05D001889 ORTHO05D001853 1.8e-07 59.7 117 31.6
Eucgr.E00048 Eucalyptus grandis HOM05D001889 ORTHO05D001853 2.3e-07 59.3 118 33.1
CAN.G567.16 Capsicum annuum HOM05D001889 ORTHO05D001853 4.0e-07 58.5 61 50.8
COL.COLO4_10729 Corchorus olitorius HOM05D001889 ORTHO05D001853 4.0e-07 58.5 97 37.1
RcHm_v2.0_Chr1g0359981 Rosa chinensis HOM05D001889 ORTHO05D001853 4.0e-07 58.5 117 30.8
ECA246G2653 Erigeron canadensis HOM05D001889 ORTHO05D001853 5.2e-07 58.2 98 39.8
FAN10G4194 Fragaria x ananassa HOM05D001889 ORTHO05D001853 6.8e-07 57.8 117 30.8
vmacro11337 Vaccinium macrocarpon HOM05D001889 ORTHO05D001853 6.8e-07 57.8 108 37.0
Ca_09513_v3 Cicer arietinum L. HOM05D001889 ORTHO05D001853 8.9e-07 57.4 121 30.6
Ca_30063_v3 Cicer arietinum L. HOM05D001889 ORTHO05D001853 8.9e-07 57.4 121 30.6
Psat3g002280 Pisum sativum HOM05D001889 ORTHO05D001853 8.9e-07 57.4 124 33.1
Carub.0007s3328 Capsella rubella HOM05D011058 ORTHO05D013148 1.2e-06 57.0 60 46.7
SMO353G0044 Selaginella moellendorffii HOM05D001889 ORTHO05D001853 1.2e-06 57.0 118 36.4
COL.COLO4_06276 Corchorus olitorius HOM05D001889 ORTHO05D001853 1.5e-06 56.6 117 29.1
Gorai.007G109200 Gossypium raimondii HOM05D001889 ORTHO05D001853 1.5e-06 56.6 117 27.4
Sc01g0002620 Simmondsia chinensis HOM05D001889 ORTHO05D001853 1.5e-06 56.6 58 53.4
CANSAT56G4277 Cannabis sativa HOM05D001889 ORTHO05D001853 2.6e-06 55.8 117 30.8
Thhalv10023752m.g Eutrema salsugineum HOM05D011058 ORTHO05D013148 2.6e-06 55.8 60 41.7
AL7G47100 Arabidopsis lyrata HOM05D011058 ORTHO05D013148 3.4e-06 55.5 58 44.8
Lalb_Chr15g0076301 Lupinus albus HOM05D001889 ORTHO05D001853 5.7e-06 54.7 124 26.6
PSO063G0572 Papaver somniferum HOM05D001889 ORTHO05D001853 5.7e-06 54.7 147 40.1
TWI15G0999 Tripterygium wilfordii HOM05D011058 ORTHO05D013148 5.7e-06 54.7 59 44.1
Manes.05G022100 Manihot esculenta HOM05D001889 ORTHO05D001853 7.5e-06 54.3 122 29.5
QL04p060477 Quercus lobata HOM05D001889 ORTHO05D001853 7.5e-06 54.3 118 38.1


User provided reference genes

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