Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 1.2e-40 169.5 93 100.0
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 1.5e-25 119.4 103 72.8
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 4.7e-24 114.4 101 69.3
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 5.8e-22 107.5 94 68.1
Medtr8g103300 Medicago truncatula HOM05D007491 ORTHO05D009489 1.3e-21 106.3 95 70.5
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 1.4e-20 102.8 97 66.0
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 3.0e-18 95.1 94 64.9
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 1.9e-17 92.4 94 62.8
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 4.3e-17 91.3 93 64.5
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 3.6e-16 88.2 58 77.6
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 3.1e-15 85.1 87 64.4
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 5.2e-15 84.3 99 57.6
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 6.8e-15 84.0 98 62.2
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 1.5e-14 82.8 95 54.7
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 2.0e-14 82.4 92 55.4
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 2.0e-14 82.4 98 60.2
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 3.4e-14 81.6 97 51.5
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 3.4e-14 81.6 94 58.5
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 3.4e-14 81.6 102 52.0
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 4.4e-14 81.3 98 56.1
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 4.4e-14 81.3 97 55.7
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 5.8e-14 80.9 97 52.6
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 5.8e-14 80.9 99 52.5
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 7.6e-14 80.5 90 60.0
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 7.6e-14 80.5 100 54.0
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 7.6e-14 80.5 100 55.0
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 7.6e-14 80.5 98 52.0
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 9.9e-14 80.1 96 52.1
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 9.9e-14 80.1 98 59.2
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 1.3e-13 79.7 98 59.2
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 2.9e-13 78.6 98 55.1
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 2.9e-13 78.6 102 52.9
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 3.8e-13 78.2 102 52.0
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 8.4e-13 77.0 92 48.9
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.4e-12 76.3 90 52.2
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.4e-12 76.3 90 52.2
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 2.4e-12 75.5 76 59.2
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 2.4e-12 75.5 93 54.8
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 3.2e-12 75.1 99 52.5
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 4.2e-12 74.7 99 50.5
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 5.4e-12 74.3 85 50.6
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 5.4e-12 74.3 93 51.6
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 5.4e-12 74.3 99 51.5
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 7.1e-12 73.9 92 47.8
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 7.1e-12 73.9 92 47.8
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 7.1e-12 73.9 93 53.8
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 9.3e-12 73.6 96 55.2
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 9.3e-12 73.6 95 53.7
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 9.3e-12 73.6 93 52.7
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 1.2e-11 73.2 70 61.4
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 1.6e-11 72.8 76 59.2
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 1.6e-11 72.8 94 53.2
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 2.1e-11 72.4 101 50.5
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 2.7e-11 72.0 95 53.7
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 2.7e-11 72.0 96 52.1
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 3.5e-11 71.6 89 49.4
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 3.5e-11 71.6 94 50.0
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 3.5e-11 71.6 92 53.3
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 3.5e-11 71.6 58 67.2
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 4.6e-11 71.2 94 48.9
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 4.6e-11 71.2 94 48.9
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 4.6e-11 71.2 90 45.6
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 4.6e-11 71.2 92 51.1
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 4.6e-11 71.2 90 51.1
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 6.0e-11 70.9 94 48.9
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 7.8e-11 70.5 90 53.3
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 1.0e-10 70.1 93 51.6
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.0e-10 70.1 97 49.5
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 1.0e-10 70.1 105 51.4
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 1.3e-10 69.7 90 51.1
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.7e-10 69.3 55 69.1
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 1.7e-10 69.3 102 53.9
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 1.7e-10 69.3 96 50.0
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 1.7e-10 69.3 100 50.0
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 2.3e-10 68.9 94 48.9
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 2.3e-10 68.9 94 48.9
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 3.9e-10 68.2 102 52.9
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 6.6e-10 67.4 82 51.2
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 6.6e-10 67.4 101 51.5
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 6.6e-10 67.4 102 48.0
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 1.1e-09 66.6 100 49.0
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.9e-09 65.9 85 52.9
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 2.5e-09 65.5 90 46.7
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 3.3e-09 65.1 93 50.5
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 4.3e-09 64.7 96 50.0
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 4.3e-09 64.7 95 47.4
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 1.3e-08 63.2 54 64.8
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 2.8e-08 62.0 93 46.2
arahy.Tifrunner.gnm1.ann1.KI7M62 Arachis hypogaea HOM05D007491 ORTHO05D009489 3.6e-08 61.6 91 53.8
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 3.6e-08 61.6 96 49.0
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 6.2e-08 60.8 94 46.8
FAN26G2745 Fragaria x ananassa HOM05D001691 ORTHO05D001704 8.1e-08 60.5 86 50.0
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 1.8e-07 59.3 84 47.6
Gorai.001G006300 Gossypium raimondii HOM05D007491 ORTHO05D009489 2.4e-07 58.9 90 46.7
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 4.0e-07 58.2 70 51.4
arahy.Tifrunner.gnm1.ann1.RT52KZ Arachis hypogaea HOM05D007491 ORTHO05D009489 6.9e-07 57.4 86 53.5
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 6.9e-07 57.4 84 44.0
FvH4_2g08780 Fragaria vesca HOM05D006766 ORTHO05D008534 1.2e-06 56.6 89 43.8
Os02g0273900 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.2e-06 56.6 93 48.4
Os06g0332500 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.5e-06 56.2 99 44.4
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 2.6e-06 55.5 87 42.5
SHI47168 Sapria himalayana HOM05D007491 ORTHO05D009489 4.4e-06 54.7 60 53.3
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 9.9e-06 53.5 51 52.9
PSO144G0109 Papaver somniferum HOM05D006766 ORTHO05D008534 9.9e-06 53.5 67 43.3
PSO144G0117 Papaver somniferum HOM05D006766 ORTHO05D008534 9.9e-06 53.5 67 43.3


User provided reference genes

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