Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 7.8e-68 260.4 136 100.0
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 5.8e-63 244.2 136 92.6
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 1.1e-61 240.0 136 91.2
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 1.7e-51 206.1 136 77.2
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 6.6e-51 204.1 136 77.9
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 5.4e-45 184.5 124 77.4
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 6.0e-44 181.0 133 69.2
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 1.0e-43 180.3 134 68.7
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 1.1e-42 176.8 134 68.7
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 1.5e-42 176.4 133 69.9
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.3e-42 175.3 133 69.2
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 4.3e-42 174.9 133 69.2
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.6e-42 174.5 133 68.4
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 7.4e-42 174.1 133 69.2
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 3.7e-41 171.8 133 67.7
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 8.1e-41 170.6 136 69.1
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 4.0e-40 168.3 133 66.2
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 6.9e-40 167.5 132 63.6
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 3.4e-39 165.2 121 73.6
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 5.8e-39 164.5 131 66.4
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 5.8e-39 164.5 131 66.4
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 9.9e-39 163.7 136 62.5
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 9.9e-39 163.7 133 63.9
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 1.3e-38 163.3 134 64.2
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 2.9e-38 162.2 133 62.4
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 3.8e-38 161.8 133 60.2
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 4.9e-38 161.4 133 61.7
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 4.9e-38 161.4 133 60.2
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 6.4e-38 161.0 132 61.4
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 8.4e-38 160.6 133 60.2
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 1.1e-37 160.2 133 60.2
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 1.4e-37 159.8 141 59.6
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 1.4e-37 159.8 133 61.7
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 1.4e-37 159.8 130 63.1
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 2.4e-37 159.1 130 60.8
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 2.4e-37 159.1 133 58.6
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 2.4e-37 159.1 133 58.6
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 3.2e-37 158.7 121 68.6
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 4.2e-37 158.3 133 62.4
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 5.5e-37 157.9 133 57.9
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 5.5e-37 157.9 133 63.2
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 9.3e-37 157.1 134 59.7
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 9.3e-37 157.1 133 57.1
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 1.2e-36 156.8 133 58.6
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 1.2e-36 156.8 133 59.4
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.6e-36 156.4 133 57.1
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 2.1e-36 156.0 133 60.2
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 2.1e-36 156.0 133 57.9
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 3.5e-36 155.2 136 57.4
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 1.0e-35 153.7 125 62.4
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 1.0e-35 153.7 131 61.8
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 2.3e-35 152.5 134 57.5
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 2.3e-35 152.5 134 57.5
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 2.3e-35 152.5 135 57.8
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 2.3e-35 152.5 135 57.8
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 3.9e-35 151.8 124 63.7
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 5.1e-35 151.4 132 58.3
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 6.7e-35 151.0 133 54.9
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 1.1e-34 150.2 133 54.9
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 1.9e-34 149.4 137 54.7
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 1.9e-34 149.4 134 59.0
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 2.5e-34 149.1 133 58.6
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 5.6e-34 147.9 136 53.7
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 9.6e-34 147.1 115 66.1
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 9.6e-34 147.1 128 60.2
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 9.6e-34 147.1 121 65.3
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 9.6e-34 147.1 135 57.8
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 1.3e-33 146.7 134 55.2
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 1.6e-33 146.4 134 54.5
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 1.6e-33 146.4 134 57.5
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 2.8e-33 145.6 121 63.6
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 2.8e-33 145.6 135 57.0
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 2.8e-33 145.6 115 62.6
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 3.7e-33 145.2 133 57.9
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 4.8e-33 144.8 133 56.4
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 8.2e-33 144.1 115 60.9
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 2.4e-32 142.5 116 62.9
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 6.9e-32 141.0 114 65.8
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 9.0e-32 140.6 130 59.2
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.2e-31 140.2 113 63.7
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.5e-31 139.8 116 60.3
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 2.6e-31 139.0 132 53.8
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 1.7e-30 136.3 115 59.1
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 3.8e-30 135.2 135 51.9
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 1.9e-29 132.9 131 54.2
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 4.6e-28 128.3 131 51.9
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 6.0e-28 127.9 101 65.3
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 7.9e-28 127.5 137 48.9
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 2.3e-27 125.9 137 50.4
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.5e-26 122.5 130 53.1
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 7.4e-26 120.9 100 67.0
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 9.7e-26 120.6 126 54.0
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 1.6e-25 119.8 131 50.4
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 2.2e-25 119.4 104 58.7
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 1.8e-24 116.3 131 46.6
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 3.4e-23 112.1 132 46.2
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 1.1e-21 107.1 125 48.8
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 7.9e-20 100.9 131 40.5
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 1.5e-18 96.7 116 46.6
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 3.7e-17 92.0 127 41.7
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 4.8e-09 65.1 51 66.7


User provided reference genes

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