Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g011520 Pisum sativum HOM05D000111 ORTHO05D001475 8.4e-57 223.4 108 100.0
TPR.G32715 Trifolium pratense HOM05D000111 ORTHO05D001475 6.7e-38 160.6 108 69.4
TPR.G32708 Trifolium pratense HOM05D000111 ORTHO05D001475 2.8e-36 155.2 108 68.5
Medtr2g046300 Medicago truncatula HOM05D000111 ORTHO05D001475 1.5e-34 149.4 108 67.6
Psat7g029800 Pisum sativum HOM05D000111 ORTHO05D001475 4.5e-34 147.9 107 67.3
Medtr2g046390 Medicago truncatula HOM05D000111 ORTHO05D001475 7.6e-34 147.1 108 66.7
Psat6g082880 Pisum sativum HOM05D000111 ORTHO05D001475 3.8e-33 144.8 107 66.4
Psat7g011320 Pisum sativum HOM05D000111 ORTHO05D001475 5.0e-33 144.4 107 65.4
Medtr8g104480 Medicago truncatula HOM05D000111 ORTHO05D001475 7.9e-31 137.1 108 63.9
Lj2g0009948 Lotus japonicus HOM05D000111 ORTHO05D001475 1.1e-29 133.3 97 63.9
Psat7g010000 Pisum sativum HOM05D000111 ORTHO05D001475 9.7e-29 130.2 69 89.9
TPR.G39235 Trifolium pratense HOM05D000111 ORTHO05D001475 2.4e-27 125.6 108 58.3
TPR.G39682 Trifolium pratense HOM05D000111 ORTHO05D001475 2.4e-27 125.6 108 59.3
Lj3g0013917 Lotus japonicus HOM05D000111 ORTHO05D001475 9.1e-27 123.6 95 62.1
Lj3g0019844 Lotus japonicus HOM05D000111 ORTHO05D001475 5.9e-26 120.9 95 60.0
TPR.G31539 Trifolium pratense HOM05D000111 ORTHO05D001475 1.4e-24 116.3 108 55.6
TPR.G39146 Trifolium pratense HOM05D000111 ORTHO05D001475 1.4e-24 116.3 108 55.6
Lj4g0027164 Lotus japonicus HOM05D000111 ORTHO05D001475 5.5e-24 114.4 95 56.8
TPR.G32695 Trifolium pratense HOM05D000111 ORTHO05D001475 7.2e-24 114.0 108 56.5
Psat7g003520 Pisum sativum HOM05D000111 ORTHO05D001475 9.1e-19 97.1 101 48.5
Psat7g004280 Pisum sativum HOM05D000111 ORTHO05D001475 9.1e-19 97.1 109 46.8
Psat7g004880 Pisum sativum HOM05D000111 ORTHO05D001475 4.5e-18 94.7 106 48.1
Psat0s2821g0040 Pisum sativum HOM05D000111 ORTHO05D001475 1.0e-17 93.6 109 45.0
Glyma.09G186600 Glycine max HOM05D000111 ORTHO05D001475 6.1e-15 84.3 96 51.0
TPR.G18481 Trifolium pratense HOM05D000111 ORTHO05D001475 3.3e-13 78.6 107 44.9
Atru.chr10.314 Acer truncatum HOM05D000111 ORTHO05D001475 1.3e-12 76.6 97 38.1
TAR636G2154 Trochodendron aralioides HOM05D000111 ORTHO05D001475 7.0e-11 70.9 93 38.7
Medtr8g012990 Medicago truncatula HOM05D000111 ORTHO05D026878 9.1e-11 70.5 54 61.1
TAR375G0947 Trochodendron aralioides HOM05D000111 ORTHO05D001334 1.6e-10 69.7 95 38.9
BcaC01g05525 Brassica carinata HOM05D000111 ORTHO05D001475 4.5e-10 68.2 109 38.5
A03p21450 Brassica napus HOM05D000111 ORTHO05D001475 4.5e-10 68.2 109 38.5
C03p25360 Brassica napus HOM05D000111 ORTHO05D001475 4.5e-10 68.2 109 38.5
BolC3t14930H Brassica oleracea HOM05D000111 ORTHO05D001475 4.5e-10 68.2 109 38.5
BraA03t11381Z Brassica rapa HOM05D000111 ORTHO05D001475 4.5e-10 68.2 109 38.5
Carub.0004s2038 Capsella rubella HOM05D000111 ORTHO05D001475 5.9e-10 67.8 95 42.1
Carub.0004s1886 Capsella rubella HOM05D000111 ORTHO05D001475 7.7e-10 67.4 95 41.1
Carub.0187s0001 Capsella rubella HOM05D000111 ORTHO05D001475 1.3e-09 66.6 106 38.7
Thhalv10017827m.g Eutrema salsugineum HOM05D000111 ORTHO05D001475 2.9e-09 65.5 107 37.4
Medtr2g046430 Medicago truncatula HOM05D000111 ORTHO05D001475 3.8e-09 65.1 45 68.9
Medtr2g046520 Medicago truncatula HOM05D000111 ORTHO05D001475 3.8e-09 65.1 45 68.9
BcaC06g34263 Brassica carinata HOM05D000111 ORTHO05D001475 6.5e-09 64.3 95 42.1
AL4G35290 Arabidopsis lyrata HOM05D000111 ORTHO05D001475 8.5e-09 63.9 95 37.9
A03p24520 Brassica napus HOM05D000111 ORTHO05D001475 8.5e-09 63.9 107 36.4
Carub.0004s0763 Capsella rubella HOM05D000111 ORTHO05D001475 8.5e-09 63.9 95 40.0
Thhalv10017910m.g Eutrema salsugineum HOM05D000111 ORTHO05D001475 8.5e-09 63.9 94 38.3
Aqoxy7G01248 Aquilegia oxysepala HOM05D000111 ORTHO05D007071 1.1e-08 63.5 93 34.4
C04p64220 Brassica napus HOM05D000111 ORTHO05D001475 1.1e-08 63.5 96 39.6
BolC4t22545H Brassica oleracea HOM05D000111 ORTHO05D001475 1.1e-08 63.5 95 42.1
BraA04t18185Z Brassica rapa HOM05D000111 ORTHO05D001475 1.1e-08 63.5 96 39.6
AL4G35260 Arabidopsis lyrata HOM05D000111 ORTHO05D001475 1.5e-08 63.2 95 36.8
A03p21140 Brassica napus HOM05D000111 ORTHO05D001475 1.5e-08 63.2 94 40.4
A04p26830 Brassica napus HOM05D000111 ORTHO05D001475 1.9e-08 62.8 96 38.5
Atru.chr6.1401 Acer truncatum HOM05D000111 ORTHO05D001475 2.5e-08 62.4 96 35.4
A04p26800 Brassica napus HOM05D000111 ORTHO05D001475 3.2e-08 62.0 96 38.5
C03p29270 Brassica napus HOM05D000111 ORTHO05D001475 3.2e-08 62.0 57 54.4
Sp4g20610 Schrenkiella parvula HOM05D000111 ORTHO05D001475 3.2e-08 62.0 95 36.8
AT2G35250 Arabidopsis thaliana HOM05D000111 ORTHO05D001475 4.2e-08 61.6 95 35.8
C04p64230 Brassica napus HOM05D000111 ORTHO05D001475 5.5e-08 61.2 96 37.5
Carub.0004s0869 Capsella rubella HOM05D000111 ORTHO05D001475 5.5e-08 61.2 95 37.9
Thhalv10009920m.g Eutrema salsugineum HOM05D000111 ORTHO05D001475 5.5e-08 61.2 102 36.3
BcaB01g03707 Brassica carinata HOM05D000111 ORTHO05D001475 7.2e-08 60.8 95 38.9
BcaC02g07723 Brassica carinata HOM05D000111 ORTHO05D001475 7.2e-08 60.8 96 37.5
BcaC02g11974 Brassica carinata HOM05D000111 ORTHO05D001475 7.2e-08 60.8 56 55.4
A05p07740 Brassica napus HOM05D000111 ORTHO05D001475 7.2e-08 60.8 56 55.4
C04p09410 Brassica napus HOM05D000111 ORTHO05D001475 7.2e-08 60.8 56 55.4
BolC4t27906H Brassica oleracea HOM05D000111 ORTHO05D001475 7.2e-08 60.8 96 37.5
BraA05t19742Z Brassica rapa HOM05D000111 ORTHO05D001475 7.2e-08 60.8 56 55.4
Atru.chr11.876 Acer truncatum HOM05D000111 ORTHO05D001475 9.4e-08 60.5 96 36.5
AT2G38255 Arabidopsis thaliana HOM05D000111 ORTHO05D001475 1.2e-07 60.1 101 34.7
Carub.0004s0870 Capsella rubella HOM05D000111 ORTHO05D001475 1.2e-07 60.1 95 36.8
A05p07760 Brassica napus HOM05D000111 ORTHO05D001475 1.6e-07 59.7 56 53.6
BraA05t19745Z Brassica rapa HOM05D000111 ORTHO05D001475 1.6e-07 59.7 56 53.6
Carub.0004s0868 Capsella rubella HOM05D000111 ORTHO05D001475 1.6e-07 59.7 95 38.9
Hma1.2p1_0535F.1_g173830 Hydrangea macrophylla HOM05D000111 ORTHO05D001475 1.6e-07 59.7 98 38.8
BcaC02g07721 Brassica carinata HOM05D000111 ORTHO05D001475 2.1e-07 59.3 96 37.5
BcaC02g11972 Brassica carinata HOM05D000111 ORTHO05D001475 2.1e-07 59.3 56 53.6
BolC4t22544H Brassica oleracea HOM05D000111 ORTHO05D001475 2.1e-07 59.3 105 37.1
BolC4t27908H Brassica oleracea HOM05D000111 ORTHO05D001475 2.1e-07 59.3 96 37.5
THA.LOC104806704 Tarenaya hassleriana HOM05D000111 ORTHO05D001475 2.7e-07 58.9 101 33.7
Haze_08120 Corylus avellana HOM05D000111 ORTHO05D001475 3.6e-07 58.5 93 34.4
Sp4g17470 Schrenkiella parvula HOM05D000111 ORTHO05D001475 3.6e-07 58.5 96 36.5
Atru.chr6.1412 Acer truncatum HOM05D000111 ORTHO05D001475 4.7e-07 58.2 95 34.7
CARHR133760 Cardamine hirsuta HOM05D000111 ORTHO05D001475 4.7e-07 58.2 107 32.7
Medtr8g012985 Medicago truncatula HOM05D000111 ORTHO05D001475 4.7e-07 58.2 45 62.2
AL4G35480 Arabidopsis lyrata HOM05D000111 ORTHO05D001475 8.0e-07 57.4 96 36.5
AT2G27320 Arabidopsis thaliana HOM05D000111 ORTHO05D001475 8.0e-07 57.4 95 36.8
AL4G35450 Arabidopsis lyrata HOM05D000111 ORTHO05D001475 1.0e-06 57.0 96 36.5
C04p64200 Brassica napus HOM05D000111 ORTHO05D001475 1.4e-06 56.6 95 36.8
BraA04t18184Z Brassica rapa HOM05D000111 ORTHO05D001475 1.4e-06 56.6 95 36.8
BcaC02g11973 Brassica carinata HOM05D000111 ORTHO05D001475 1.8e-06 56.2 42 64.3
Aqoxy3G02767 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 3.0e-06 55.5 95 32.6
CARHR129410 Cardamine hirsuta HOM05D000111 ORTHO05D001475 3.0e-06 55.5 94 34.0
BolC4t27903H Brassica oleracea HOM05D000111 ORTHO05D001475 4.0e-06 55.1 95 36.8
TAR629G1416 Trochodendron aralioides HOM05D000111 ORTHO05D000134 4.0e-06 55.1 108 32.4
Haze_08251 Corylus avellana HOM05D000111 ORTHO05D001475 5.2e-06 54.7 97 35.1


User provided reference genes

Program Settings