Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g234480 Pisum sativum HOM05D006753 ORTHO05D008521 5.8e-54 214.2 124 100.0
Ca_11278_v3 Cicer arietinum L. HOM05D006753 ORTHO05D008521 4.8e-48 194.5 128 88.3
Medtr1g115255 Medicago truncatula HOM05D006753 ORTHO05D008521 8.5e-45 183.7 124 79.0
VMungo0720G0065 Vigna mungo HOM05D006753 ORTHO05D008521 3.7e-40 168.3 126 77.8
Glyma.10G288900 Glycine max HOM05D006753 ORTHO05D008521 1.8e-39 166.0 126 71.4
Phvul.007G012200 Phaseolus vulgaris HOM05D006753 ORTHO05D008521 6.9e-39 164.1 126 69.8
TPR.G4104 Trifolium pratense HOM05D006753 ORTHO05D008521 2.6e-38 162.2 126 82.5
Lalb_Chr02g0144111 Lupinus albus HOM05D006753 ORTHO05D008521 5.9e-38 161.0 129 70.5
Lj5g0026283 Lotus japonicus HOM05D006753 ORTHO05D008521 1.9e-36 156.0 131 68.7
FAN17G2405 Fragaria x ananassa HOM05D006753 ORTHO05D008521 3.0e-34 148.7 124 66.1
Nn3g18540 Nelumbo nucifera HOM05D006753 ORTHO05D008521 1.1e-33 146.7 124 61.3
FvH4_4g37311 Fragaria vesca HOM05D006753 ORTHO05D008521 2.0e-33 146.0 124 64.5
FAN07G1749 Fragaria x ananassa HOM05D006753 ORTHO05D008521 2.6e-33 145.6 124 65.3
Duzib132G0454 Durio zibethinus HOM05D006753 ORTHO05D008521 2.8e-32 142.1 119 67.2
Manes.04G161100 Manihot esculenta HOM05D006753 ORTHO05D008521 3.7e-32 141.7 127 61.4
QL01p000327 Quercus lobata HOM05D006753 ORTHO05D008521 4.8e-32 141.4 116 62.9
RcHm_v2.0_Chr4g0447151 Rosa chinensis HOM05D006753 ORTHO05D008521 6.3e-32 141.0 119 62.2
Duzib052G0750 Durio zibethinus HOM05D006753 ORTHO05D008521 8.2e-32 140.6 119 64.7
PGR044G1510 Punica granatum HOM05D006753 ORTHO05D008521 8.2e-32 140.6 118 65.3
MD13G1001300 Malus domestica HOM05D006753 ORTHO05D008521 4.1e-31 138.3 119 62.2
Cfa018673 Carpinus fangiana HOM05D006753 ORTHO05D008521 9.1e-31 137.1 119 61.3
Thecc.02G152400 Theobroma cacao HOM05D006753 ORTHO05D008521 2.6e-30 135.6 119 66.4
MELO3C011766.2 Cucumis melo HOM05D006753 ORTHO05D008521 3.5e-30 135.2 119 63.0
CANSAT78G0938 Cannabis sativa HOM05D006753 ORTHO05D008521 4.5e-30 134.8 124 58.9
CsaV3_5G029140 Cucumis sativus L. HOM05D006753 ORTHO05D008521 2.9e-29 132.1 119 60.5
Gohir.D12G135600 Gossypium hirsutum HOM05D006753 ORTHO05D008521 2.9e-29 132.1 124 71.8
Sabra08G0001000 Salix brachista HOM05D006753 ORTHO05D008521 3.8e-29 131.7 132 56.8
TAR629G2108 Trochodendron aralioides HOM05D006753 ORTHO05D008521 5.0e-29 131.3 125 58.4
Atru.chr11.42 Acer truncatum HOM05D006753 ORTHO05D008521 6.5e-29 131.0 124 58.1
Sed0019092 Sechium edule HOM05D006753 ORTHO05D008521 6.5e-29 131.0 119 60.5
MBI03_g11899_MAGBIO Magnolia biondii HOM05D006753 ORTHO05D008521 8.5e-29 130.6 122 57.4
Gohir.A12G132000 Gossypium hirsutum HOM05D006753 ORTHO05D008521 1.1e-28 130.2 123 72.4
Gorai.008G146800 Gossypium raimondii HOM05D006753 ORTHO05D008521 1.5e-28 129.8 124 71.8
COL.COLO4_33141 Corchorus olitorius HOM05D006753 ORTHO05D008521 1.9e-28 129.4 127 59.8
Lj6g0020021 Lotus japonicus HOM05D006753 ORTHO05D008521 1.9e-28 129.4 127 61.4
GSVIVG01034354001 Vitis vinifera HOM05D006753 ORTHO05D008521 3.2e-28 128.6 125 57.6
TWI53G0448 Tripterygium wilfordii HOM05D006753 ORTHO05D008521 4.2e-28 128.3 119 59.7
Sc21g0003760 Simmondsia chinensis HOM05D006753 ORTHO05D008521 5.5e-28 127.9 120 58.3
DCAR_023493 Daucus carota HOM05D006753 ORTHO05D008521 1.2e-27 126.7 119 61.3
Potri.008G003100 Populus trichocarpa HOM05D006753 ORTHO05D008521 3.6e-27 125.2 134 53.7
EL10Ac9g23017 Beta vulgaris HOM05D006753 ORTHO05D008521 8.0e-27 124.0 113 57.5
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 8.0e-27 124.0 121 56.2
Ciclev10017207m.g Citrus clementina HOM05D006753 ORTHO05D008521 1.0e-26 123.6 124 57.3
RcHm_v2.0_Chr5g0030611 Rosa chinensis HOM05D006753 ORTHO05D008521 1.8e-26 122.9 123 61.0
AUR62032899 Chenopodium quinoa HOM05D006753 ORTHO05D008521 3.0e-26 122.1 121 57.9
Dinv25482 Davidia involucrata HOM05D006753 ORTHO05D008521 3.0e-26 122.1 120 65.0
ECA238G1815 Erigeron canadensis HOM05D006753 ORTHO05D008521 3.0e-26 122.1 124 56.5
Migut.E00658 Erythranthe guttata HOM05D006753 ORTHO05D008521 4.0e-26 121.7 122 54.1
MSTRG.13663 Avicennia marina HOM05D006753 ORTHO05D008521 6.7e-26 120.9 118 57.6
Migut.E00593 Erythranthe guttata HOM05D006753 ORTHO05D008521 6.7e-26 120.9 121 53.7
SGA_v2.0_scaffold119G32769 Striga asiatica HOM05D006753 ORTHO05D008521 6.7e-26 120.9 120 60.8
Sopen03g009600 Solanum pennellii HOM05D006753 ORTHO05D008521 1.1e-25 120.2 123 52.8
ATR0124G001 Amborella trichopoda HOM05D006753 ORTHO05D008521 2.6e-25 119.0 124 57.3
ClCG11G012760 Citrullus lanatus HOM05D006753 ORTHO05D008521 2.6e-25 119.0 119 56.3
arahy.Tifrunner.gnm1.ann1.IW7U68 Arachis hypogaea HOM05D006753 ORTHO05D008521 3.3e-25 118.6 81 76.5
arahy.Tifrunner.gnm1.ann1.RGG8YR Arachis hypogaea HOM05D006753 ORTHO05D008521 3.3e-25 118.6 81 76.5
Thhalv10002245m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 4.4e-25 118.2 123 54.5
Zm00001eb044950 Zea mays HOM05D006753 ORTHO05D008521 4.4e-25 118.2 114 57.9
Nitab4.5_0000075g0200 Nicotiana tabacum HOM05D006753 ORTHO05D008521 7.5e-25 117.5 124 53.2
CiPaw.16G000900 Carya illinoinensis HOM05D006753 ORTHO05D008521 9.7e-25 117.1 119 57.1
Sp6g34360 Schrenkiella parvula HOM05D006753 ORTHO05D008521 1.3e-24 116.7 119 62.2
CDE05G2438 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 2.2e-24 115.9 124 53.2
Os10g0491900 Oryza sativa ssp. japonica HOM05D006753 ORTHO05D008521 2.2e-24 115.9 114 57.0
CAN.G815.2 Capsicum annuum HOM05D006753 ORTHO05D008521 4.8e-24 114.8 122 51.6
PGSC0003DMG400018762 Solanum tuberosum HOM05D006753 ORTHO05D008521 4.8e-24 114.8 123 50.4
Prupe.1G351400 Prunus persica HOM05D006753 ORTHO05D008521 8.2e-24 114.0 119 63.0
CDE05G0871 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 1.1e-23 113.6 123 52.0
AUR62017753 Chenopodium quinoa HOM05D006753 ORTHO05D008521 1.4e-23 113.2 120 56.7
Aqoxy3G04333 Aquilegia oxysepala HOM05D006753 ORTHO05D008521 1.8e-23 112.8 105 56.2
AUR62020818 Chenopodium quinoa HOM05D006753 ORTHO05D008521 5.3e-23 111.3 121 53.7
SEGI_09956 Sequoiadendron giganteum HOM05D006753 ORTHO05D008521 5.3e-23 111.3 122 50.8
Lsat_1_v5_gn_2_64221 Lactuca sativa HOM05D006753 ORTHO05D008521 7.0e-23 110.9 119 54.6
Rhsim05G0152000 Rhododendron simsii HOM05D006753 ORTHO05D008521 7.0e-23 110.9 105 56.2
FAN11G3971 Fragaria x ananassa HOM05D006753 ORTHO05D008521 9.1e-23 110.5 120 54.2
A10p28190 Brassica napus HOM05D006753 ORTHO05D008521 1.6e-22 109.8 122 63.9
BolC9t59587H Brassica oleracea HOM05D006753 ORTHO05D008521 1.6e-22 109.8 119 66.4
BraA10t44868Z Brassica rapa HOM05D006753 ORTHO05D008521 1.6e-22 109.8 122 63.9
Nitab4.5_0008337g0010 Nicotiana tabacum HOM05D006753 ORTHO05D008521 2.0e-22 109.4 127 49.6
CARHR204450 Cardamine hirsuta HOM05D006753 ORTHO05D008521 4.5e-22 108.2 120 60.0
FvH4_3g18161 Fragaria vesca HOM05D006753 ORTHO05D008521 4.5e-22 108.2 120 53.3
AT3G52350 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 7.7e-22 107.5 120 53.3
Nitab4.5_0001307g0130 Nicotiana tabacum HOM05D006753 ORTHO05D008521 7.7e-22 107.5 130 49.2
A09p59170 Brassica napus HOM05D006753 ORTHO05D008521 1.7e-21 106.3 123 60.2
C09p68400 Brassica napus HOM05D006753 ORTHO05D008521 1.7e-21 106.3 122 62.3
PSO782G2482 Papaver somniferum HOM05D006753 ORTHO05D008521 3.8e-21 105.1 118 52.5
Carub.0005s1869 Capsella rubella HOM05D006753 ORTHO05D008521 5.0e-21 104.8 121 52.9
PSO063G2822 Papaver somniferum HOM05D006753 ORTHO05D008521 5.0e-21 104.8 118 53.4
BraA09t41301Z Brassica rapa HOM05D006753 ORTHO05D008521 1.9e-20 102.8 114 57.9
BcaC07g41240 Brassica carinata HOM05D006753 ORTHO05D008521 9.4e-20 100.5 124 56.5
C08p42460 Brassica napus HOM05D006753 ORTHO05D008521 9.4e-20 100.5 124 56.5
BolC8t51807H Brassica oleracea HOM05D006753 ORTHO05D008521 9.4e-20 100.5 124 56.5
Pp3c15_7650 Physcomitrium patens HOM05D006753 ORTHO05D008521 4.7e-19 98.2 122 45.9
Cc11_g04160 Coffea canephora HOM05D006753 ORTHO05D008521 6.1e-19 97.8 60 81.7
AL5G33000 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 2.3e-18 95.9 119 51.3
AT5G08535 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 3.0e-18 95.5 113 54.9
Peaxi162Scf00003g02334 Petunia axillaris HOM05D006753 ORTHO05D008521 6.8e-18 94.4 104 49.0
BcaB08g34880 Brassica carinata HOM05D006753 ORTHO05D008521 2.0e-17 92.8 123 50.4
Aa31LG3G18000 Aethionema arabicum HOM05D006753 ORTHO05D008521 1.3e-16 90.1 113 59.3
Eucgr.J00331 Eucalyptus grandis HOM05D006753 ORTHO05D008521 2.2e-16 89.4 168 36.3
AL6G19240 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 3.7e-16 88.6 110 54.5
HPP92_003487 Vanilla planifolia HOM05D006753 ORTHO05D008521 8.3e-16 87.4 123 54.5
HPP92_026885 Vanilla planifolia HOM05D006753 ORTHO05D008521 8.3e-16 87.4 123 54.5
Carub.0006s0749 Capsella rubella HOM05D006753 ORTHO05D008521 1.4e-15 86.7 119 58.8
BcaB08g37248 Brassica carinata HOM05D006753 ORTHO05D008521 1.8e-15 86.3 84 60.7
HanXRQChr14g0446421 Helianthus annuus HOM05D006753 ORTHO05D008521 2.4e-15 85.9 121 55.4
SMO166G0033 Selaginella moellendorffii HOM05D006753 ORTHO05D008521 4.1e-15 85.1 107 47.7
SHI21226 Sapria himalayana HOM05D000843 ORTHO05D000698 2.0e-14 82.8 67 65.7
SMO115G0110 Selaginella moellendorffii HOM05D000422 ORTHO05D002369 4.5e-14 81.6 105 46.7
Mapoly0001s0293 Marchantia polymorpha HOM05D006753 ORTHO05D008521 7.7e-14 80.9 117 40.2
Nitab4.5_0002355g0040 Nicotiana tabacum HOM05D006753 ORTHO05D008521 7.2e-12 74.3 124 41.1
Thhalv10015604m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 3.6e-11 72.0 87 52.9
AagrBONN_evm.TU.Sc2ySwM_228.1188 Anthoceros agrestis HOM05D006753 ORTHO05D008521 2.8e-08 62.4 118 35.6
CBR_g16096 Chara braunii HOM05D000019 ORTHO05D000002 2.4e-07 59.3 77 41.6
vmacro19681 Vaccinium macrocarpon HOM05D006753 ORTHO05D008521 5.4e-07 58.2 129 34.9
Cre02.g085200 Chlamydomonas reinhardtii HOM05D006753 ORTHO05D008521 2.0e-06 56.2 50 48.0
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 2.0e-06 56.2 51 49.0
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 2.7e-06 55.8 61 44.3
Haze_17401 Corylus avellana HOM05D006753 ORTHO05D008521 2.7e-06 55.8 39 69.2
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 2.7e-06 55.8 51 56.9
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 3.5e-06 55.5 51 51.0
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 4.5e-06 55.1 67 43.3
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 4.5e-06 55.1 62 40.3
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 5.9e-06 54.7 47 55.3
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 5.9e-06 54.7 51 51.0
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 5.9e-06 54.7 51 51.0
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 5.9e-06 54.7 47 55.3
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 5.9e-06 54.7 51 51.0
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 7.7e-06 54.3 51 51.0
CSS0023466 Camellia sinensis var. sinensis HOM05D006753 ORTHO05D008521 7.7e-06 54.3 32 81.2
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 7.7e-06 54.3 51 51.0
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 7.7e-06 54.3 51 51.0


User provided reference genes

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