Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 3.0e-122 441.8 215 100.0
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 3.3e-105 385.2 214 87.9
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 3.1e-95 352.1 214 79.4
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 3.2e-92 342.0 216 77.8
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 2.8e-88 328.9 212 75.9
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 3.7e-88 328.6 212 76.4
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 2.4e-87 325.9 198 78.8
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 3.1e-87 325.5 198 78.8
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 2.6e-86 322.4 195 79.0
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 1.0e-82 310.5 214 70.6
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 1.0e-82 310.5 214 70.6
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 1.5e-81 306.6 198 72.7
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 5.7e-81 304.7 195 71.8
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 5.7e-81 304.7 202 71.8
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 7.5e-81 304.3 215 67.4
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 9.7e-81 303.9 198 73.7
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 9.7e-81 303.9 212 70.8
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 2.2e-80 302.8 198 69.7
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 3.7e-80 302.0 212 66.5
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 4.8e-80 301.6 173 83.8
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 2.4e-79 299.3 208 70.7
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 5.3e-79 298.1 210 65.7
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 5.3e-79 298.1 195 73.3
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 5.3e-79 298.1 202 69.8
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 1.2e-78 297.0 195 70.8
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 2.7e-78 295.8 195 72.3
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.7e-78 295.8 195 72.3
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 7.7e-78 294.3 202 68.3
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 7.7e-78 294.3 202 68.3
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 7.7e-78 294.3 195 69.2
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 1.0e-77 293.9 202 68.3
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 2.2e-77 292.7 195 69.7
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.5e-77 291.2 202 67.8
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 6.5e-77 291.2 195 68.2
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 8.5e-77 290.8 195 71.3
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 8.5e-77 290.8 198 69.7
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 8.5e-77 290.8 195 68.7
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 8.5e-77 290.8 195 68.7
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 2.5e-76 289.3 204 70.1
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.2e-76 288.9 202 67.3
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 3.2e-76 288.9 195 71.3
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 4.2e-76 288.5 195 71.3
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 1.2e-75 287.0 198 67.7
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 2.7e-75 285.8 194 71.6
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 2.7e-75 285.8 206 67.5
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 2.7e-75 285.8 206 67.5
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 2.7e-75 285.8 206 67.5
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 4.7e-75 285.0 195 68.2
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 6.1e-75 284.6 208 64.4
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 6.1e-75 284.6 208 64.4
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 8.0e-75 284.3 193 70.5
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 8.0e-75 284.3 201 66.2
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 1.4e-74 283.5 206 67.5
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 1.4e-74 283.5 195 67.7
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 1.8e-74 283.1 191 70.2
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 1.8e-74 283.1 202 64.9
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 1.8e-74 283.1 211 62.6
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 2.3e-74 282.7 206 66.0
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 8.8e-74 280.8 247 57.1
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 8.8e-74 280.8 192 69.3
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 1.2e-73 280.4 209 66.0
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 1.5e-73 280.0 195 70.8
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 1.5e-73 280.0 192 66.1
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 2.6e-73 279.3 210 65.7
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.6e-73 279.3 192 68.8
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 9.8e-73 277.3 196 65.8
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 1.7e-72 276.6 194 69.6
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 4.8e-72 275.0 213 61.0
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 8.3e-72 274.2 194 65.5
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 2.4e-71 272.7 192 66.1
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 7.0e-71 271.2 200 63.5
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 1.6e-70 270.0 208 61.5
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 2.7e-70 269.2 216 61.1
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 3.5e-70 268.9 200 65.0
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 7.7e-70 267.7 204 62.3
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 7.7e-70 267.7 205 61.5
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 1.0e-69 267.3 198 63.6
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 2.9e-69 265.8 196 63.3
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 2.9e-69 265.8 200 64.0
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 6.5e-69 264.6 194 63.9
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 6.5e-69 264.6 193 64.2
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 1.5e-68 263.5 194 62.4
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 4.2e-68 261.9 206 61.2
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 9.4e-68 260.8 174 67.2
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 3.6e-67 258.8 194 62.4
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 8.0e-67 257.7 194 62.4
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 8.0e-67 257.7 194 60.3
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 6.8e-66 254.6 171 68.4
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 7.5e-65 251.1 171 66.7
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 9.8e-65 250.8 238 52.1
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 2.7e-62 242.7 205 58.0
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 1.7e-61 240.0 173 66.5
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 1.0e-58 230.7 194 57.7
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 3.7e-56 222.2 150 70.0
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 2.3e-50 203.0 192 50.0
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 6.8e-50 201.4 144 65.3
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 3.4e-49 199.1 193 47.7
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 2.0e-46 189.9 184 54.3
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 4.6e-46 188.7 156 61.5
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 4.6e-46 188.7 116 79.3
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 1.3e-45 187.2 198 49.5
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 3.6e-43 179.1 195 49.7
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 8.1e-43 177.9 199 48.7
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 6.8e-42 174.9 192 47.4
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 1.7e-40 170.2 183 47.0
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 6.6e-37 158.3 196 43.9
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 1.5e-36 157.1 154 50.0
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 6.8e-34 148.3 107 62.6
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 8.4e-32 141.4 194 40.7
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 1.1e-31 141.0 141 53.9
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 3.3e-28 129.4 99 61.6
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 5.2e-26 122.1 94 62.8
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 5.8e-17 92.0 169 34.3
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 1.7e-16 90.5 161 32.9
Rhsim05G0138400 Rhododendron simsii HOM05D005191 ORTHO05D006725 1.9e-12 77.0 115 46.1
Rhsim10G0150400 Rhododendron simsii HOM05D005191 ORTHO05D030537 2.5e-12 76.6 51 70.6
COL.COLO4_23752 Corchorus olitorius HOM05D005191 ORTHO05D016248 3.3e-12 76.3 61 62.3
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 2.4e-10 70.1 62 53.2
GSVIVG01012804001 Vitis vinifera HOM05D005191 ORTHO05D006725 5.3e-10 68.9 54 57.4
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 6.9e-10 68.6 56 62.5
Thhalv10022959m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 5.8e-09 65.5 96 41.7


User provided reference genes

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