Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 3.1e-240 834.7 424 100.0
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 4.9e-217 757.7 408 93.9
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.0e-206 723.4 408 89.0
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 4.9e-201 704.5 442 80.8
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 5.4e-200 701.0 440 80.2
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 5.0e-198 694.5 418 82.8
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 2.5e-197 692.2 408 84.8
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 2.2e-193 679.1 414 80.9
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 3.3e-189 665.2 418 82.1
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 1.4e-187 659.8 418 81.3
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 5.1e-182 641.3 417 77.0
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 4.2e-176 621.7 405 75.6
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 4.6e-175 618.2 412 74.8
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 4.6e-175 618.2 412 74.8
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 6.6e-174 614.4 419 73.5
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 6.6e-174 614.4 439 71.3
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 1.5e-173 613.2 409 74.6
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 1.5e-173 613.2 412 73.8
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 7.3e-173 610.9 418 72.2
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 8.1e-172 607.4 415 74.2
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 3.1e-171 605.5 406 74.9
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 9.0e-171 604.0 406 73.2
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 1.5e-170 603.2 406 73.6
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 2.0e-170 602.8 396 75.0
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 3.4e-170 602.1 417 72.9
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 4.5e-170 601.7 406 71.2
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 3.8e-169 598.6 410 72.9
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.8e-169 598.6 409 72.4
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.4e-169 597.4 410 72.7
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.4e-169 597.4 410 72.9
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 4.2e-168 595.1 408 73.8
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 7.1e-168 594.3 409 72.4
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 1.0e-166 590.5 407 72.7
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 1.3e-166 590.1 412 71.6
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 2.3e-166 589.3 411 72.0
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.8e-163 579.7 400 72.8
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 2.4e-163 579.3 468 66.5
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 3.1e-163 578.9 408 69.4
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 5.3e-163 578.2 407 69.5
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 9.0e-163 577.4 407 69.5
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 2.0e-162 576.2 406 69.5
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 2.6e-162 575.9 422 68.5
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 2.6e-162 575.9 412 70.9
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 9.9e-162 573.9 410 70.0
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 1.3e-161 573.5 407 69.5
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 3.2e-160 568.9 410 69.0
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 5.5e-160 568.2 410 70.0
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 7.1e-160 567.8 411 69.3
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 9.3e-160 567.4 412 69.2
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 1.2e-159 567.0 412 70.1
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 1.0e-158 563.9 409 68.5
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.0e-158 563.9 453 65.1
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.3e-158 563.5 418 68.2
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.3e-158 563.5 416 68.3
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 1.8e-158 563.1 408 67.6
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 3.0e-158 562.4 418 67.5
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 2.5e-157 559.3 411 68.9
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 3.3e-157 558.9 410 68.5
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 7.4e-157 557.8 408 66.9
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 2.1e-156 556.2 408 66.4
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 2.1e-156 556.2 409 67.0
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.4e-155 553.5 414 66.4
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 1.8e-155 553.1 408 66.2
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 1.8e-155 553.1 400 69.2
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 3.1e-155 552.4 414 68.4
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.5e-154 550.1 408 66.4
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 1.0e-153 547.4 454 63.4
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 1.9e-152 543.1 408 67.2
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 4.2e-152 542.0 448 65.2
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 9.3e-152 540.8 437 62.7
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 1.2e-151 540.4 437 62.0
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 1.2e-151 540.4 437 62.2
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 3.9e-150 535.4 453 61.8
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 2.5e-149 532.7 409 64.3
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.2e-148 529.6 440 63.4
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 2.2e-145 519.6 408 64.5
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 8.5e-145 517.7 334 75.4
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.1e-144 517.3 382 68.6
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.1e-142 508.4 433 63.0
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 5.7e-141 505.0 418 63.2
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 9.7e-141 504.2 435 60.2
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 3.7e-140 502.3 447 59.1
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 4.1e-139 498.8 400 65.8
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 6.9e-139 498.0 410 60.5
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 9.1e-139 497.7 411 63.3
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 3.4e-138 495.7 476 57.8
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 3.4e-138 495.7 455 55.6
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 7.7e-138 494.6 400 65.2
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 1.7e-137 493.4 348 72.1
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 3.8e-137 492.3 414 60.1
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 7.2e-136 488.0 408 61.8
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 9.4e-136 487.6 412 60.4
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 1.2e-135 487.3 400 63.8
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 1.8e-134 483.4 264 92.0
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 3.9e-134 482.3 360 66.7
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 1.4e-128 463.8 310 74.2
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 3.0e-126 456.1 419 56.1
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 3.3e-117 426.0 242 89.7
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 3.1e-115 419.5 322 68.3
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.6e-114 417.2 289 72.3
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 2.0e-114 416.8 410 55.6
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 1.4e-107 394.0 285 68.8
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 6.8e-102 375.2 426 48.8
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 2.6e-101 373.2 413 52.1
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 7.8e-98 361.7 414 49.0
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.7e-97 360.5 383 51.2
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 6.6e-89 332.0 215 77.7
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 3.4e-85 319.7 318 55.3
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 9.8e-85 318.2 207 78.3
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 1.9e-83 313.9 242 64.5
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 1.1e-80 304.7 257 59.5
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 1.8e-78 297.4 379 45.1
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 4.4e-77 292.7 310 50.6
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 6.4e-76 288.9 294 53.1
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.0e-73 281.6 362 48.1
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 2.4e-62 243.8 225 59.1
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 1.4e-59 234.6 402 37.3
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 2.4e-59 233.8 166 71.1
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 2.6e-53 213.8 137 73.7
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 2.9e-52 210.3 145 73.1
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.1e-50 204.1 179 59.8
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 1.5e-48 198.0 125 76.0
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 9.6e-48 195.3 143 67.1
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 5.3e-46 189.5 106 90.6
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 6.7e-41 172.6 401 32.4
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 2.4e-38 164.1 306 35.3
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 1.0e-36 158.7 88 90.9
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 4.6e-34 149.8 101 67.3
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 1.6e-31 141.4 106 70.8
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 2.7e-26 124.0 149 47.0
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 4.3e-24 116.7 360 29.4
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 7.7e-21 105.9 207 33.8
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.8e-17 94.7 113 52.2
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 6.7e-17 92.8 95 49.5
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.3e-16 90.5 65 67.7
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 1.4e-14 85.1 54 75.9
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.1e-11 75.5 79 48.1


User provided reference genes

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