Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g222120 Pisum sativum HOM05D002954 ORTHO05D010767 8.8e-97 357.5 256 100.0
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 1.2e-66 257.3 252 78.6
Psat6g199080 Pisum sativum HOM05D000107 ORTHO05D000062 2.1e-58 229.9 235 82.1
Psat0s2164g0040 Pisum sativum HOM05D000107 ORTHO05D010767 4.9e-55 218.8 150 70.7
Psat5g112160 Pisum sativum HOM05D002954 ORTHO05D010767 9.0e-33 144.8 144 54.9
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 5.3e-17 92.4 138 35.5
Psat6g163080 Pisum sativum HOM05D002954 ORTHO05D010767 5.0e-15 85.9 141 78.7
Psat0s4310g0080 Pisum sativum HOM05D016237 ORTHO05D010767 2.5e-14 83.6 44 86.4
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 1.2e-13 81.3 138 31.9
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 1.2e-13 81.3 138 31.9
TPR.G40235 Trifolium pratense HOM05D002954 ORTHO05D010767 7.9e-13 78.6 96 43.8
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 1.0e-12 78.2 132 32.6
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 3.9e-12 76.3 140 35.0
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 8.8e-12 75.1 147 34.0
Lj6g0018783 Lotus japonicus HOM05D002954 ORTHO05D000385 1.1e-11 74.7 107 37.4
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 6.9e-09 65.5 127 29.9
arahy.Tifrunner.gnm1.ann1.LZRM5J Arachis hypogaea HOM05D011000 ORTHO05D000385 1.5e-08 64.3 141 32.6
Lj1g0024925 Lotus japonicus HOM05D002954 ORTHO05D003353 2.6e-08 63.5 140 30.0
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 3.4e-08 63.2 138 28.3
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 4.5e-08 62.8 138 27.5
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 4.5e-08 62.8 138 27.5
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.7e-08 62.0 47 57.4
arahy.Tifrunner.gnm1.ann1.E8HHXW Arachis hypogaea HOM05D002954 ORTHO05D010308 1.3e-07 61.2 137 27.7
arahy.Tifrunner.gnm1.ann1.Y6RTQD Arachis hypogaea HOM05D002954 ORTHO05D010308 2.2e-07 60.5 137 27.7
arahy.Tifrunner.gnm1.ann1.I134XL Arachis hypogaea HOM05D011000 ORTHO05D003353 1.9e-06 57.4 127 33.1
arahy.Tifrunner.gnm1.ann1.QU52XI Arachis hypogaea HOM05D011000 ORTHO05D003353 3.2e-06 56.6 108 32.4
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.2e-06 56.6 140 27.9
Medtr0232s0030 Medicago truncatula HOM05D002954 ORTHO05D010767 5.5e-06 55.8 66 45.5
TPR.G13772 Trifolium pratense HOM05D000107 ORTHO05D000062 9.4e-06 55.1 93 33.3


User provided reference genes

Program Settings