Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 2.1e-202 708.8 345 100.0
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 1.9e-166 589.3 336 86.6
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 6.0e-165 584.3 340 85.3
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 1.8e-161 572.8 337 82.2
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 4.0e-161 571.6 336 84.5
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 4.9e-159 564.7 335 81.8
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 1.1e-158 563.5 335 81.2
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 9.3e-150 533.9 335 76.1
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 9.3e-150 533.9 333 79.0
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 1.6e-141 506.5 335 73.7
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 1.8e-137 493.0 333 72.4
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 3.1e-137 492.3 333 72.4
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 5.8e-136 488.0 334 72.2
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 7.7e-120 434.5 336 62.5
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 3.6e-117 425.6 336 62.5
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 3.6e-117 425.6 335 62.4
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 4.4e-115 418.7 346 60.4
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 9.7e-115 417.5 338 62.7
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 8.2e-114 414.5 339 59.9
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 3.1e-113 412.5 349 57.9
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 1.5e-112 410.2 340 58.5
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 1.0e-111 407.5 341 57.8
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 6.5e-111 404.8 343 57.7
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 8.5e-111 404.4 340 57.9
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 6.1e-109 398.3 331 58.9
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 7.9e-109 397.9 336 61.6
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 1.4e-108 397.1 336 61.6
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 1.8e-108 396.7 331 60.4
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 2.3e-108 396.4 353 57.5
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 3.0e-108 396.0 336 58.0
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 8.8e-108 394.4 336 58.3
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.5e-107 393.7 332 59.6
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 1.5e-107 393.7 334 57.8
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 4.4e-107 392.1 339 58.4
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 7.4e-107 391.3 333 59.2
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 1.7e-106 390.2 339 58.4
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 2.2e-106 389.8 341 57.5
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 4.8e-106 388.7 333 59.2
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 1.8e-105 386.7 334 57.8
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 2.4e-105 386.3 332 56.3
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 7.7e-104 381.3 333 59.5
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 1.3e-103 380.6 336 56.5
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 3.8e-103 379.0 336 56.5
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 2.5e-102 376.3 342 54.7
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 1.2e-101 374.0 333 55.3
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.6e-101 373.6 340 55.9
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 2.7e-101 372.9 333 56.2
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 8.0e-101 371.3 335 54.9
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 8.0e-101 371.3 335 55.2
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 4.0e-100 369.0 334 56.0
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 5.2e-100 368.6 335 54.6
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 1.2e-99 367.5 312 59.3
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 2.6e-99 366.3 302 61.3
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 2.6e-99 366.3 337 55.2
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 3.3e-99 365.9 340 54.7
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 6.3e-98 361.7 336 54.5
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 1.8e-97 360.1 334 54.8
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 7.0e-97 358.2 335 56.7
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 7.7e-96 354.8 304 58.6
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 1.6e-93 347.1 342 53.5
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 6.8e-92 341.7 338 52.1
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 1.8e-89 333.6 337 52.8
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 3.5e-88 329.3 343 51.3
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 1.3e-87 327.4 364 50.5
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.7e-87 327.0 312 53.8
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.8e-87 325.9 288 58.3
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 5.0e-87 325.5 334 50.6
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 1.1e-86 324.3 343 51.3
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 4.7e-85 318.9 345 49.9
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 6.1e-85 318.5 341 51.0
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 8.0e-85 318.2 348 52.3
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 3.0e-84 316.2 273 59.0
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 6.8e-84 315.1 343 51.6
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 8.8e-84 314.7 286 57.3
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 1.2e-83 314.3 299 55.2
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 5.7e-83 312.0 241 61.8
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 7.5e-83 311.6 340 50.6
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 7.5e-83 311.6 340 50.6
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 2.8e-82 309.7 285 55.4
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 4.9e-82 308.9 340 50.3
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 1.1e-81 307.8 248 60.9
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 1.1e-81 307.8 338 48.8
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 1.4e-81 307.4 340 50.3
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 2.4e-81 306.6 276 55.1
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 2.7e-80 303.1 274 57.7
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 5.9e-80 302.0 340 49.4
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 7.8e-80 301.6 338 45.9
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.7e-79 300.4 247 61.1
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 3.8e-79 299.3 340 49.4
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 2.8e-77 293.1 228 63.2
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 1.1e-73 281.2 271 54.6
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 1.3e-71 274.2 341 46.9
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 1.2e-69 267.7 283 52.7
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 9.5e-62 241.5 272 50.4
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 2.3e-60 236.9 217 62.7
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 7.1e-57 225.3 332 39.8
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 2.3e-55 220.3 333 40.8
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 7.3e-54 215.3 276 46.4
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 8.9e-52 208.4 192 56.8
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 2.2e-50 203.8 339 38.6
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 6.0e-48 195.7 328 38.1
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 3.3e-46 189.9 328 39.0
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 5.6e-46 189.1 148 61.5
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.4e-44 184.5 347 35.4
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 2.4e-41 173.7 255 42.0
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 5.1e-39 166.0 160 51.9
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 2.1e-37 160.6 222 42.8
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 1.4e-33 147.9 219 43.4
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 7.1e-25 119.0 360 28.9
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.0e-23 113.6 233 39.1
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 4.3e-22 109.8 118 49.2
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 6.5e-18 95.9 65 60.0
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 1.2e-16 91.7 284 28.2
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 1.2e-16 91.7 291 29.6
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-16 91.3 68 70.6
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 2.1e-16 90.9 63 58.7
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 1.0e-15 88.6 86 47.7
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 1.8e-15 87.8 59 57.6
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 3.9e-15 86.7 62 56.5
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 4.3e-14 83.2 191 30.9
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 2.4e-12 77.4 41 85.4
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 2.6e-11 73.9 57 68.4
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 8.5e-10 68.9 62 54.8
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 3.2e-09 67.0 324 26.2
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.1e-08 64.3 182 32.4
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 2.5e-06 57.4 58 53.4


User provided reference genes

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