Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 6.0e-111 404.1 186 100.0
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 6.0e-111 404.1 186 100.0
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.3e-92 343.2 186 83.9
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 1.2e-90 336.7 183 83.6
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.1e-87 325.9 183 80.3
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 3.5e-87 325.1 183 80.9
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 4.3e-85 318.2 185 79.5
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 3.7e-84 315.1 185 77.8
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 2.6e-82 308.9 190 76.8
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 2.3e-78 295.8 186 73.7
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 1.7e-73 279.6 189 69.8
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.2e-73 279.3 189 67.7
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 3.8e-73 278.5 188 68.6
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 2.5e-72 275.8 188 69.1
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 4.2e-72 275.0 191 66.0
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 7.1e-72 274.2 184 68.5
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 7.1e-72 274.2 189 66.1
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 9.3e-72 273.9 185 68.6
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 9.3e-72 273.9 189 67.7
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 9.3e-72 273.9 188 68.1
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 9.3e-72 273.9 188 67.6
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.2e-71 273.5 190 68.4
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.7e-71 272.3 186 67.7
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.7e-71 272.3 186 67.7
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.5e-71 271.9 186 67.7
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 3.5e-71 271.9 191 67.5
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 6.0e-71 271.2 194 67.5
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 6.0e-71 271.2 186 67.7
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.0e-70 270.4 186 67.2
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 1.3e-70 270.0 186 67.7
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 1.8e-70 269.6 190 66.3
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.8e-70 269.6 192 65.6
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.8e-70 269.6 193 65.3
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 2.3e-70 269.2 189 65.6
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.0e-70 268.9 188 67.0
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 3.0e-70 268.9 191 67.0
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 3.9e-70 268.5 189 68.3
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 5.1e-70 268.1 188 68.6
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 6.7e-70 267.7 187 66.3
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 8.7e-70 267.3 190 68.4
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 3.3e-69 265.4 193 64.2
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 4.3e-69 265.0 186 67.2
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 4.3e-69 265.0 191 67.5
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 4.3e-69 265.0 188 67.6
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 4.3e-69 265.0 189 66.1
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 5.7e-69 264.6 186 66.1
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.3e-68 263.5 191 66.0
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.3e-68 263.5 189 66.7
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 1.6e-68 263.1 186 66.1
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.6e-68 263.1 182 65.9
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.2e-68 262.7 190 65.3
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 3.7e-68 261.9 182 65.4
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 3.7e-68 261.9 189 64.6
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 3.7e-68 261.9 193 64.8
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 4.8e-68 261.5 182 65.4
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 4.8e-68 261.5 182 64.8
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 4.8e-68 261.5 187 65.2
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 6.3e-68 261.2 185 64.9
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 6.3e-68 261.2 187 65.2
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 6.3e-68 261.2 188 65.4
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 8.2e-68 260.8 185 65.4
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 8.2e-68 260.8 193 64.8
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.4e-67 260.0 183 68.9
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.4e-67 260.0 190 66.8
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.4e-67 260.0 192 65.1
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 1.8e-67 259.6 182 64.8
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 4.1e-67 258.5 185 64.3
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 5.3e-67 258.1 190 64.7
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 6.9e-67 257.7 194 63.9
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 1.2e-66 256.9 191 63.4
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 1.5e-66 256.5 186 64.5
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 1.5e-66 256.5 187 62.6
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 3.4e-66 255.4 187 64.2
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 5.9e-66 254.6 160 76.2
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 7.7e-66 254.2 195 66.7
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.0e-65 253.8 189 64.0
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 1.3e-65 253.4 184 62.5
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.7e-65 253.1 184 64.1
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 2.2e-65 252.7 184 64.1
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 2.2e-65 252.7 192 63.5
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.9e-65 252.3 187 64.7
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.9e-65 252.3 187 64.7
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 2.9e-65 252.3 187 64.7
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 1.9e-64 249.6 187 59.9
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 2.5e-64 249.2 190 62.1
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 3.2e-64 248.8 189 61.9
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 1.2e-63 246.9 193 63.2
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.2e-63 246.9 185 62.2
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.6e-63 246.5 189 60.8
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.6e-63 246.5 188 61.7
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 2.7e-63 245.7 190 59.5
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 2.7e-63 245.7 189 63.5
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 1.4e-62 243.4 187 61.0
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 2.3e-62 242.7 187 62.0
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 2.3e-62 242.7 185 63.2
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 6.7e-62 241.1 182 61.0
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 6.7e-62 241.1 184 60.3
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 8.8e-62 240.7 184 59.8
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 7.4e-61 237.7 184 60.9
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 6.3e-60 234.6 190 54.7
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 6.3e-60 234.6 184 58.7
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 1.4e-59 233.4 143 76.2
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 5.3e-59 231.5 183 59.0
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 2.2e-57 226.1 188 56.4
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 5.0e-57 224.9 184 53.8
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 1.6e-55 219.9 173 59.5
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 6.1e-55 218.0 163 64.4
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 2.8e-52 209.1 181 53.6
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 1.8e-51 206.5 188 52.1
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 5.9e-50 201.4 167 59.3
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 5.9e-50 201.4 167 59.3
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 2.3e-46 189.5 137 64.2
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 5.7e-45 184.9 162 56.2
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 2.1e-39 166.4 185 43.2
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 3.7e-36 155.6 78 79.5
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 7.2e-32 141.4 72 73.6
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 9.5e-08 61.2 61 39.3


User provided reference genes

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