Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 2.3e-243 845.1 414 100.0
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 1.7e-219 765.8 420 91.2
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 2.4e-216 755.4 419 89.5
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 4.0e-216 754.6 419 90.2
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 2.8e-201 705.3 418 84.0
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 2.8e-201 705.3 426 83.3
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 2.6e-199 698.7 419 83.3
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 2.1e-196 689.1 421 82.4
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 1.5e-194 682.9 414 82.4
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 5.3e-168 594.7 400 77.5
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 9.1e-168 594.0 414 72.9
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 5.0e-166 588.2 421 70.8
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 6.5e-166 587.8 417 70.7
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 3.6e-164 582.0 421 71.5
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 7.9e-164 580.9 421 71.5
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 1.0e-163 580.5 427 71.4
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 1.8e-163 579.7 421 70.8
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 2.3e-163 579.3 430 70.0
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 1.3e-161 573.5 393 73.8
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 3.7e-161 572.0 380 72.6
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 3.7e-161 572.0 418 68.9
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 3.7e-161 572.0 374 75.9
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 4.8e-161 571.6 374 75.9
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 4.8e-161 571.6 423 70.0
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 8.2e-161 570.9 434 70.3
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 1.1e-160 570.5 339 81.4
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 1.4e-160 570.1 419 69.2
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 1.8e-160 569.7 338 80.5
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 5.3e-160 568.2 335 80.0
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 5.3e-160 568.2 407 70.5
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 5.3e-160 568.2 388 73.5
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 1.2e-159 567.0 348 77.0
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 7.7e-159 564.3 342 78.7
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 1.0e-158 563.9 416 69.5
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 1.3e-158 563.5 337 79.8
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 1.7e-158 563.1 369 73.4
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 5.0e-158 561.6 449 66.8
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 1.2e-156 557.0 412 69.9
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 1.1e-154 550.4 340 76.5
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 3.3e-154 548.9 331 81.0
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 1.8e-152 543.1 388 70.4
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 3.1e-152 542.3 417 67.9
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 9.1e-152 540.8 417 68.1
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 1.2e-151 540.4 424 68.2
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 2.2e-150 536.2 360 71.9
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 8.5e-150 534.3 331 77.6
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 1.2e-148 530.4 337 74.2
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 2.7e-148 529.3 420 66.0
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 1.8e-147 526.6 347 72.3
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 3.0e-147 525.8 338 74.3
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 9.8e-146 520.8 340 73.8
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 5.0e-142 508.4 483 59.2
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 8.5e-142 507.7 420 63.6
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 1.1e-141 507.3 382 69.4
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 2.7e-140 502.7 474 57.2
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 3.0e-139 499.2 417 64.0
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 2.0e-138 496.5 384 69.5
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 3.7e-137 492.3 527 55.0
CDE02G1402 Ceratophyllum demersum HOM05D001977 ORTHO05D002246 7.0e-136 488.0 296 78.0
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 2.7e-135 486.1 399 64.9
Glyma.09G181880 Glycine max HOM05D005766 ORTHO05D007002 2.9e-134 482.6 246 93.1
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 1.7e-121 440.3 335 66.6
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 1.2e-119 434.1 412 58.7
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 4.3e-117 425.6 335 60.0
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 1.2e-106 391.0 331 62.2
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.5e-106 390.6 428 54.9
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 5.8e-106 388.7 233 79.4
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.1e-104 382.5 453 52.1
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 5.4e-104 382.1 453 52.1
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 1.6e-103 380.6 405 50.4
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 7.8e-103 378.3 259 73.0
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.1e-96 357.8 282 67.4
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.1e-96 357.8 282 67.4
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 1.1e-96 357.8 259 69.9
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.5e-90 337.4 479 45.7
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 2.1e-87 327.0 427 49.4
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 6.9e-83 312.0 266 57.9
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 7.4e-77 292.0 327 48.6
QL09p011984 Quercus lobata HOM05D005766 ORTHO05D007002 2.4e-75 287.0 284 57.7
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 1.7e-73 280.8 169 79.9
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 1.6e-71 274.2 251 61.4
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 1.5e-69 267.7 259 57.9
CBR_g23333 Chara braunii HOM05D005766 ORTHO05D007002 5.3e-67 259.2 299 44.5
Actinidia08607 Actinidia chinensis HOM05D005766 ORTHO05D007002 9.0e-67 258.5 152 81.6
Glyma.12G172150 Glycine max HOM05D005766 ORTHO05D007002 2.0e-66 257.3 133 91.7
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.6e-58 230.3 228 60.1
Nitab4.5_0000157g0190 Nicotiana tabacum HOM05D005766 ORTHO05D007002 5.9e-58 229.2 173 67.6
Glyma.03G072901 Glycine max HOM05D005766 ORTHO05D007002 1.7e-57 227.6 115 93.0
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 6.5e-57 225.7 228 60.1
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 7.2e-56 222.2 137 78.8
Glyma.16G148650 Glycine max HOM05D005766 ORTHO05D007002 3.7e-52 209.9 102 96.1
Glyma.10G228301 Glycine max HOM05D005766 ORTHO05D007002 3.1e-51 206.8 100 97.0
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 5.2e-38 162.9 102 77.5
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 1.3e-36 158.3 366 32.2
Nitab4.5_0000327g0060 Nicotiana tabacum HOM05D005766 ORTHO05D007002 4.8e-36 156.4 90 81.1
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 7.7e-26 122.5 310 31.6
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.9e-24 117.9 79 70.9
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 9.5e-24 115.5 67 80.6
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.4e-22 111.7 67 74.6
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.3e-20 105.1 78 67.9
COL.COLO4_30253 Corchorus olitorius HOM05D005766 ORTHO05D007002 4.4e-13 80.1 137 43.1
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 1.1e-11 75.5 60 61.7
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 1.4e-11 75.1 258 22.9
arahy.Tifrunner.gnm1.ann1.DC2VU6 Arachis hypogaea HOM05D000702 ORTHO05D007002 1.3e-09 68.6 210 31.9
Haze_07236 Corylus avellana HOM05D002332 ORTHO05D002509 6.6e-09 66.2 197 25.9
RcHm_v2.0_Chr7g0190461 Rosa chinensis HOM05D002332 ORTHO05D002509 3.3e-08 63.9 198 27.3
Cfa018843 Carpinus fangiana HOM05D002332 ORTHO05D002509 5.6e-08 63.2 197 25.4
FAN08G0156 Fragaria x ananassa HOM05D002332 ORTHO05D002509 5.6e-08 63.2 198 27.3
QL10p004201 Quercus lobata HOM05D002332 ORTHO05D002509 5.6e-08 63.2 168 26.8
Thecc.03G126600 Theobroma cacao HOM05D002332 ORTHO05D002509 1.6e-07 61.6 202 23.3
FvH4_5g07940 Fragaria vesca HOM05D002332 ORTHO05D002509 2.8e-07 60.8 198 26.8
FAN18G1292 Fragaria x ananassa HOM05D002332 ORTHO05D002509 2.8e-07 60.8 198 26.8
Medtr1g034785 Medicago truncatula HOM05D002332 ORTHO05D002509 2.8e-07 60.8 167 24.6
Duzib084G0667 Durio zibethinus HOM05D002332 ORTHO05D002509 3.6e-07 60.5 202 23.8
Ca_12501_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 4.7e-07 60.1 202 23.8
Ca_25727_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 4.7e-07 60.1 202 23.8
TWI39G1032 Tripterygium wilfordii HOM05D002332 ORTHO05D002509 6.2e-07 59.7 201 23.9
GSVIVG01008513001 Vitis vinifera HOM05D002332 ORTHO05D002509 6.2e-07 59.7 197 25.4
BolC8t50036H Brassica oleracea HOM05D002332 ORTHO05D002509 8.0e-07 59.3 216 23.6
Cfa018082 Carpinus fangiana HOM05D002332 ORTHO05D002509 8.0e-07 59.3 197 23.4
Aa31LG10G9730 Aethionema arabicum HOM05D002332 ORTHO05D002509 1.1e-06 58.9 172 23.3
C05p13900 Brassica napus HOM05D002332 ORTHO05D002509 1.1e-06 58.9 162 28.4
Mapoly0049s0058 Marchantia polymorpha HOM05D005961 ORTHO05D007391 1.1e-06 58.9 316 19.9
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 1.1e-06 58.9 238 23.1
BcaB05g22960 Brassica carinata HOM05D002332 ORTHO05D002509 1.4e-06 58.5 216 25.0
ATR0686G098 Amborella trichopoda HOM05D002332 ORTHO05D002509 1.8e-06 58.2 167 25.7
BcaC07g39390 Brassica carinata HOM05D002332 ORTHO05D002509 1.8e-06 58.2 216 24.1
C08p24150 Brassica napus HOM05D002332 ORTHO05D002509 1.8e-06 58.2 216 24.1
Aa31LG8G4250 Aethionema arabicum HOM05D002332 ORTHO05D002509 2.3e-06 57.8 170 22.4
A01p24930 Brassica napus HOM05D002332 ORTHO05D002509 2.3e-06 57.8 216 23.6
CiPaw.05G179300 Carya illinoinensis HOM05D002332 ORTHO05D002509 2.3e-06 57.8 167 23.4
Haze_18030 Corylus avellana HOM05D002332 ORTHO05D002509 2.3e-06 57.8 173 22.5
Glyma.18G275100 Glycine max HOM05D002332 ORTHO05D002509 2.3e-06 57.8 166 23.5
Gohir.D03G113300 Gossypium hirsutum HOM05D002332 ORTHO05D002509 2.3e-06 57.8 259 22.4
Gorai.003G119500 Gossypium raimondii HOM05D002332 ORTHO05D002509 2.3e-06 57.8 202 22.8
BraA01t02404Z Brassica rapa HOM05D002332 ORTHO05D002509 3.1e-06 57.4 216 23.6
arahy.Tifrunner.gnm1.ann1.3HS4ZY Arachis hypogaea HOM05D005766 ORTHO05D007002 4.0e-06 57.0 39 74.4
Dinv36800 Davidia involucrata HOM05D005151 ORTHO05D006322 4.0e-06 57.0 218 22.0
CSS0008874 Camellia sinensis var. sinensis HOM05D005151 ORTHO05D006322 5.2e-06 56.6 222 24.8
Gohir.A03G053700 Gossypium hirsutum HOM05D002332 ORTHO05D002509 5.2e-06 56.6 199 22.6
Dinv01308 Davidia involucrata HOM05D002332 ORTHO05D002509 6.8e-06 56.2 170 24.1
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 6.8e-06 56.2 367 21.0
QL02p004496 Quercus lobata HOM05D002332 ORTHO05D002509 6.8e-06 56.2 167 24.6
QL06p048778 Quercus lobata HOM05D002332 ORTHO05D002509 6.8e-06 56.2 167 24.6


User provided reference genes

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