Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 3.7e-63 245.0 150 100.0
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 7.9e-29 131.0 135 56.3
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 8.7e-28 127.5 163 47.9
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 1.9e-27 126.3 136 54.4
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 1.6e-26 123.2 143 47.6
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 5.3e-17 91.7 105 45.7
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 1.5e-16 90.1 112 56.2
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 1.3e-15 87.0 89 52.8
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 6.5e-15 84.7 122 42.6
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 1.9e-14 83.2 108 51.9
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 9.3e-14 80.9 70 54.3
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 9.3e-14 80.9 77 49.4
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 4.6e-13 78.6 81 49.4
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 6.1e-13 78.2 81 49.4
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 3.7e-10 68.9 78 43.6
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 3.7e-10 68.9 80 40.0
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 4.8e-10 68.6 80 41.2
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 5.3e-09 65.1 121 33.9
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 2.0e-08 63.2 125 34.4
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 2.0e-08 63.2 132 30.3
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 3.4e-08 62.4 89 34.8
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 3.4e-08 62.4 118 28.8
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 5.9e-08 61.6 128 32.0
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 5.9e-08 61.6 79 43.0
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 1.3e-07 60.5 111 32.4
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.7e-07 60.1 107 33.6
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 3.8e-07 58.9 88 38.6
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 3.8e-07 58.9 111 33.3
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 3.8e-07 58.9 110 35.5
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 3.8e-07 58.9 107 34.6
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 6.5e-07 58.2 80 40.0
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 6.5e-07 58.2 128 40.6
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 6.5e-07 58.2 116 30.2
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 8.5e-07 57.8 110 35.5
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 8.5e-07 57.8 121 34.7
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 8.5e-07 57.8 107 35.5
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 1.1e-06 57.4 120 40.8
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 1.4e-06 57.0 83 34.9
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 1.4e-06 57.0 79 39.2
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 1.4e-06 57.0 107 34.6
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 1.4e-06 57.0 119 34.5
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.9e-06 56.6 120 34.2
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 1.9e-06 56.6 120 34.2
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 1.9e-06 56.6 71 40.8
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 2.5e-06 56.2 84 34.5
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 3.2e-06 55.8 80 37.5
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 4.2e-06 55.5 64 40.6
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 4.2e-06 55.5 80 30.0
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 4.2e-06 55.5 56 46.4
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 4.2e-06 55.5 84 40.5
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 5.5e-06 55.1 49 49.0
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 7.2e-06 54.7 59 42.4
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 7.2e-06 54.7 120 34.2
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 7.2e-06 54.7 66 39.4
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 9.4e-06 54.3 79 35.4
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 9.4e-06 54.3 121 33.9
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 9.4e-06 54.3 79 36.7


User provided reference genes

Program Settings